EnhancerDB
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  3. vista727[chr1:23178080-23178304]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista727[chr1:23178080-23178304]
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Tissue distribution of vista727
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Transcription factor that possibly regulate vista727[chr1:23178080-23178304]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23178066 23178080 NR2F1 JASPAR yes 27398716
chr1 23178066 23178080 NR2F1 JASPAR yes 118248661
chr1 23178066 23178081 TFAP2A JASPAR yes 27398717
chr1 23178066 23178081 TFAP2A JASPAR yes 118248662
chr1 23178083 23178087 NFE TRANSFAC yes 27398718
chr1 23178083 23178087 NFE TRANSFAC yes 118248663
chr1 23178089 23178093 NFE TRANSFAC yes 27398719
chr1 23178089 23178093 NFE TRANSFAC yes 118248664
chr1 23178103 23178107 YY1 TRANSFAC yes 27398720
chr1 23178103 23178107 YY1 TRANSFAC yes 118248665
chr1 23178110 23178121 CDX2 JASPAR yes 27398721
chr1 23178110 23178121 CDX2 JASPAR yes 118248666
chr1 23178111 23178122 HOXA10 JASPAR yes 27398722
chr1 23178111 23178122 HOXC11 JASPAR yes 27398723
chr1 23178111 23178122 HOXC12 JASPAR yes 27398724
chr1 23178111 23178122 HOXD12 JASPAR yes 27398725
chr1 23178111 23178122 HOXA10 JASPAR yes 118248667
chr1 23178111 23178122 HOXC11 JASPAR yes 118248668
chr1 23178111 23178122 HOXC12 JASPAR yes 118248669
chr1 23178111 23178122 HOXD12 JASPAR yes 118248670
chr1 23178112 23178121 CDX1 JASPAR yes 27398726
chr1 23178112 23178121 CDX1 JASPAR yes 118248671
chr1 23178112 23178122 HOXC10 JASPAR yes 27398727
chr1 23178112 23178122 HOXD11 JASPAR yes 27398728
chr1 23178112 23178122 HOXD13 JASPAR yes 27398729
chr1 23178112 23178122 HOXC10 JASPAR yes 118248672
chr1 23178112 23178122 HOXD11 JASPAR yes 118248673
chr1 23178112 23178122 HOXD13 JASPAR yes 118248674
chr1 23178117 23178131 SPI1 JASPAR yes 27398730
chr1 23178117 23178131 SPI1 JASPAR yes 118248675
chr1 23178122 23178127 ETS2 TRANSFAC yes 27398731
chr1 23178122 23178127 ETS2 TRANSFAC yes 118248676
chr1 23178124 23178138 NR2F1 JASPAR yes 27398732
chr1 23178124 23178138 NR2F1 JASPAR yes 118248677
chr1 23178148 23178166 MAFF JASPAR yes 27398733
chr1 23178148 23178166 MAFF JASPAR yes 118248678
chr1 23178150 23178161 NRL JASPAR yes 27398734
chr1 23178150 23178161 NRL JASPAR yes 118248679
chr1 23178150 23178165 MAFK JASPAR yes 27398735
chr1 23178150 23178165 MAFK JASPAR yes 118248680
chr1 23178163 23178167 H1TF2 TRANSFAC yes 27398736
chr1 23178163 23178167 NFE TRANSFAC yes 27398737
chr1 23178163 23178167 SRF TRANSFAC yes 27398738
chr1 23178163 23178167 H1TF2 TRANSFAC yes 118248681
chr1 23178163 23178167 NFE TRANSFAC yes 118248682
chr1 23178163 23178167 SRF TRANSFAC yes 118248683
chr1 23178181 23178202 ZNF263 JASPAR yes 27398739
chr1 23178181 23178202 ZNF263 JASPAR yes 118248684
chr1 23178186 23178207 ZNF263 JASPAR yes 27398740
chr1 23178186 23178207 ZNF263 JASPAR yes 118248685
chr1 23178193 23178214 ZNF263 JASPAR yes 27398741
chr1 23178193 23178214 ZNF263 JASPAR yes 118248686
chr1 23178200 23178211 FLI1 JASPAR yes 27398742
chr1 23178200 23178211 FLI1 JASPAR yes 118248687
chr1 23178200 23178219 CTCF JASPAR yes 27398743
chr1 23178200 23178219 CTCF JASPAR yes 118248688
chr1 23178202 23178210 EHF JASPAR yes 27398744
chr1 23178202 23178210 EHF JASPAR yes 118248689
chr1 23178204 23178211 SPIB JASPAR yes 27398745
chr1 23178204 23178211 SPIB JASPAR yes 118248690
chr1 23178208 23178225 RXRA JASPAR yes 27398746
chr1 23178208 23178225 RXRA JASPAR yes 118248691
chr1 23178224 23178234 BHLHE40 JASPAR yes 27398747
chr1 23178224 23178234 BHLHE41 JASPAR yes 27398748
chr1 23178224 23178234 MLXIPL JASPAR yes 27398749
chr1 23178224 23178234 MLX JASPAR yes 27398750
chr1 23178224 23178234 TFE3 JASPAR yes 27398751
chr1 23178224 23178234 TFEB JASPAR yes 27398752
chr1 23178224 23178234 TFEC JASPAR yes 27398753
chr1 23178224 23178234 BHLHE40 JASPAR yes 118248692
chr1 23178224 23178234 BHLHE41 JASPAR yes 118248693
chr1 23178224 23178234 MLXIPL JASPAR yes 118248694
chr1 23178224 23178234 MLX JASPAR yes 118248695
chr1 23178224 23178234 TFE3 JASPAR yes 118248696
chr1 23178224 23178234 TFEB JASPAR yes 118248697
chr1 23178224 23178234 TFEC JASPAR yes 118248698
chr1 23178225 23178235 MAX JASPAR yes 27398754
chr1 23178225 23178235 MAX JASPAR yes 118248699
chr1 23178226 23178231 MYC TRANSFAC yes 27398755
chr1 23178226 23178231 USF1 TRANSFAC yes 27398756
chr1 23178226 23178231 USF2 TRANSFAC yes 27398757
chr1 23178226 23178231 MYC TRANSFAC yes 118248700
chr1 23178226 23178231 USF1 TRANSFAC yes 118248701
chr1 23178226 23178231 USF2 TRANSFAC yes 118248702
chr1 23178244 23178259 MEF2C JASPAR yes 27398758
chr1 23178244 23178259 MEF2C JASPAR yes 118248703
chr1 23178245 23178257 MEF2B JASPAR yes 27398759
chr1 23178245 23178257 MEF2B JASPAR yes 118248704
chr1 23178247 23178251 YY1 TRANSFAC yes 27398760
chr1 23178247 23178251 YY1 TRANSFAC yes 118248705
chr1 23178270 23178288 TP63 JASPAR yes 27398761
chr1 23178270 23178288 TP63 JASPAR yes 118248706
chr1 23178277 23178290 EOMES JASPAR yes 27398762
chr1 23178277 23178290 EOMES JASPAR yes 118248707
chr1 23178279 23178289 TBR1 JASPAR yes 27398763
chr1 23178279 23178289 TBR1 JASPAR yes 118248708
chr1 23178279 23178290 TBX2 JASPAR yes 27398764
chr1 23178279 23178290 TBX2 JASPAR yes 118248709
chr1 23178279 23178299 TBX19 JASPAR yes 27398765
chr1 23178279 23178299 TBX19 JASPAR yes 118248710
chr1 23178280 23178290 TBX21 JASPAR yes 27398766
chr1 23178280 23178290 TBX21 JASPAR yes 118248711
chr1 23178280 23178294 PAX6 JASPAR yes 27398767
chr1 23178280 23178294 PAX6 JASPAR yes 118248712
chr1 23178280 23178299 PAX5 JASPAR yes 27398768
chr1 23178280 23178299 PAX5 JASPAR yes 118248713
chr1 23178296 23178310 MTF1 JASPAR yes 27398769
chr1 23178296 23178310 MTF1 JASPAR yes 118248714
SNP sites on vista727[chr1:23178080-23178304]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23178101 rs4655132 T A no 155362
chr1 23178135 rs551200817 C T
NR2F1
155363
chr1 23178145 rs183887040 G A no 155364
chr1 23178146 rs151014171 T TA no 155365
chr1 23178199 rs115555330 A G
ZNF263
155366
chr1 23178230 rs547862731 G A,C
BHLHE40 BHLHE41 MAX MLX MLXIPL MYC TFE3 TFEB TFEC USF1 USF2
155367
chr1 23178266 rs114496192 C T no 155368
Genes possibly regulated by vista727[chr1:23178080-23178304]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista727[chr1:23178080-23178304]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results