EnhancerDB
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  3. vista738[chr1:23589856-23590232]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista738[chr1:23589856-23590232]
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Tissue distribution of vista738
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Transcription factor that possibly regulate vista738[chr1:23589856-23590232]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23589841 23589860 REST JASPAR yes 27425311
chr1 23589841 23589860 REST JASPAR yes 118249187
chr1 23589896 23589900 YY1 TRANSFAC yes 27425312
chr1 23589896 23589900 YY1 TRANSFAC yes 118249188
chr1 23589912 23589925 ZBTB18 JASPAR yes 27425313
chr1 23589912 23589925 ZBTB18 JASPAR yes 118249189
chr1 23589913 23589919 ZNF354C JASPAR yes 27425314
chr1 23589913 23589919 ZNF354C JASPAR yes 118249190
chr1 23589913 23589928 SCRT1 JASPAR yes 27425315
chr1 23589913 23589928 SCRT1 JASPAR yes 118249191
chr1 23589914 23589924 FIGLA JASPAR yes 27425316
chr1 23589914 23589924 FIGLA JASPAR yes 118249192
chr1 23589915 23589924 SNAI2 JASPAR yes 27425317
chr1 23589915 23589924 SNAI2 JASPAR yes 118249193
chr1 23589916 23589921 USF2 TRANSFAC yes 27425318
chr1 23589916 23589921 USF2 TRANSFAC yes 118249194
chr1 23589938 23589948 RELA JASPAR yes 27425319
chr1 23589938 23589948 RELA JASPAR yes 118249195
chr1 23589942 23589949 NFATC2 JASPAR yes 27425320
chr1 23589942 23589949 NFATC2 JASPAR yes 118249196
chr1 23589948 23589954 SOX10 JASPAR yes 27425321
chr1 23589948 23589954 SOX10 JASPAR yes 118249197
chr1 23589956 23589963 MEIS1 JASPAR yes 27425322
chr1 23589956 23589963 MEIS1 JASPAR yes 118249198
chr1 23589956 23589964 MEIS2 JASPAR yes 27425323
chr1 23589956 23589964 MEIS3 JASPAR yes 27425324
chr1 23589956 23589964 MEIS2 JASPAR yes 118249199
chr1 23589956 23589964 MEIS3 JASPAR yes 118249200
chr1 23589966 23589976 RORA JASPAR yes 27425325
chr1 23589966 23589976 RORA JASPAR yes 118249201
chr1 23589967 23589980 NR2F1 JASPAR yes 27425326
chr1 23589967 23589980 NR2F1 JASPAR yes 118249202
chr1 23589969 23589977 NR4A2 JASPAR yes 27425327
chr1 23589969 23589977 NR4A2 JASPAR yes 118249203
chr1 23589969 23589987 RARA JASPAR yes 27425328
chr1 23589969 23589987 RARA JASPAR yes 118249204
chr1 23589971 23589975 ESR1 TRANSFAC yes 27425329
chr1 23589971 23589975 ESR1 TRANSFAC yes 118249205
chr1 23589998 23590013 TFAP2C JASPAR yes 27425330
chr1 23589998 23590013 TFAP2C JASPAR yes 118249206
chr1 23590001 23590012 EBF1 JASPAR yes 27425331
chr1 23590001 23590012 EBF1 JASPAR yes 118249207
chr1 23590009 23590015 PEA3 TRANSFAC yes 27425332
chr1 23590009 23590015 PEA3 TRANSFAC yes 118249208
chr1 23590030 23590039 NFIX JASPAR yes 27425333
chr1 23590030 23590039 NFIX JASPAR yes 118249209
chr1 23590032 23590038 NFIC JASPAR yes 27425334
chr1 23590032 23590038 NFIC JASPAR yes 118249210
chr1 23590041 23590055 GLIS3 JASPAR yes 27425335
chr1 23590041 23590055 GLIS3 JASPAR yes 118249211
chr1 23590045 23590057 GLI2 JASPAR yes 27425336
chr1 23590045 23590057 ZBTB7B JASPAR yes 27425337
chr1 23590045 23590057 ZBTB7C JASPAR yes 27425338
chr1 23590045 23590057 GLI2 JASPAR yes 118249212
chr1 23590045 23590057 ZBTB7B JASPAR yes 118249213
chr1 23590045 23590057 ZBTB7C JASPAR yes 118249214
chr1 23590051 23590055 ESR1 TRANSFAC yes 27425339
chr1 23590051 23590055 ESR1 TRANSFAC yes 118249215
chr1 23590074 23590078 YY1 TRANSFAC yes 27425340
chr1 23590074 23590078 YY1 TRANSFAC yes 118249216
chr1 23590075 23590085 HOXA13 JASPAR yes 27425341
chr1 23590075 23590085 HOXB13 JASPAR yes 27425342
chr1 23590075 23590085 HOXC10 JASPAR yes 27425343
chr1 23590075 23590085 HOXD11 JASPAR yes 27425344
chr1 23590075 23590085 HOXD13 JASPAR yes 27425345
chr1 23590075 23590085 HOXA13 JASPAR yes 118249217
chr1 23590075 23590085 HOXB13 JASPAR yes 118249218
chr1 23590075 23590085 HOXC10 JASPAR yes 118249219
chr1 23590075 23590085 HOXD11 JASPAR yes 118249220
chr1 23590075 23590085 HOXD13 JASPAR yes 118249221
chr1 23590075 23590086 HOXC11 JASPAR yes 27425346
chr1 23590075 23590086 HOXC13 JASPAR yes 27425347
chr1 23590075 23590086 HOXC11 JASPAR yes 118249222
chr1 23590075 23590086 HOXC13 JASPAR yes 118249223
chr1 23590076 23590085 CDX1 JASPAR yes 27425348
chr1 23590076 23590085 CDX1 JASPAR yes 118249224
chr1 23590076 23590087 CDX2 JASPAR yes 27425349
chr1 23590076 23590087 CDX2 JASPAR yes 118249225
chr1 23590096 23590100 YY1 TRANSFAC yes 27425350
chr1 23590096 23590100 YY1 TRANSFAC yes 118249226
chr1 23590115 23590120 ETS2 TRANSFAC yes 27425351
chr1 23590115 23590120 ETS2 TRANSFAC yes 118249227
chr1 23590118 23590137 CTCF JASPAR yes 27425352
chr1 23590118 23590137 CTCF JASPAR yes 118249228
chr1 23590156 23590170 POU4F1 JASPAR yes 27425353
chr1 23590156 23590170 POU4F1 JASPAR yes 118249229
chr1 23590156 23590172 POU4F2 JASPAR yes 27425354
chr1 23590156 23590172 POU4F3 JASPAR yes 27425355
chr1 23590156 23590172 POU4F2 JASPAR yes 118249230
chr1 23590156 23590172 POU4F3 JASPAR yes 118249231
chr1 23590157 23590173 POU4F2 JASPAR yes 27425356
chr1 23590157 23590173 POU4F3 JASPAR yes 27425357
chr1 23590157 23590173 POU4F2 JASPAR yes 118249232
chr1 23590157 23590173 POU4F3 JASPAR yes 118249233
chr1 23590159 23590163 YY1 TRANSFAC yes 27425358
chr1 23590159 23590163 YY1 TRANSFAC yes 118249234
chr1 23590159 23590173 POU4F1 JASPAR yes 27425359
chr1 23590159 23590173 POU4F1 JASPAR yes 118249235
chr1 23590165 23590181 ZNF143 JASPAR yes 27425360
chr1 23590165 23590181 ZNF143 JASPAR yes 118249236
chr1 23590166 23590177 DMRT3 JASPAR yes 27425361
chr1 23590166 23590177 DMRT3 JASPAR yes 118249237
chr1 23590170 23590175 GATA2 JASPAR yes 27425362
chr1 23590170 23590175 GATA2 JASPAR yes 118249238
chr1 23590176 23590189 SMAD2 JASPAR yes 27425363
chr1 23590176 23590189 SMAD2 JASPAR yes 118249239
chr1 23590176 23590193 RXRA JASPAR yes 27425364
chr1 23590176 23590193 RXRA JASPAR yes 118249240
chr1 23590198 23590203 MYC TRANSFAC yes 27425365
chr1 23590198 23590203 MYC TRANSFAC yes 118249241
chr1 23590216 23590223 JUN TRANSFAC yes 27425366
chr1 23590216 23590223 JUN TRANSFAC yes 118249242
chr1 23590220 23590241 ZNF263 JASPAR yes 27425367
chr1 23590220 23590241 ZNF263 JASPAR yes 118249243
SNP sites on vista738[chr1:23589856-23590232]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23589938 rs576916869 C T
RELA
157780
chr1 23589947 rs543976352 C T
NFATC2 RELA
157781
chr1 23590013 rs75729402 G A
PEA3 TFAP2C
157782
chr1 23590178 rs143566588 G T
RXRA SMAD2 ZNF143
157783
chr1 23590182 rs146482027 A G
RXRA SMAD2
157784
chr1 23590183 rs72659756 C T
RXRA SMAD2
157785
chr1 23590184 rs2806548 A G
RXRA SMAD2
157786
Genes possibly regulated by vista738[chr1:23589856-23590232]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 23410516 23504301 - LUZP1 ENSG00000169641.9 23504301 0.74 0.99 308 14445
chr1 23516993 23521222 - HTR1D ENSG00000179546.3 23521222 0.8 1.0 309 31366
chr1 23630264 23670829 - HNRNPR ENSG00000125944.14 23670829 0.79 0.99 310 19403
Expression level of Genes
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miRNAs possibly regulated by vista738[chr1:23589856-23590232]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results