EnhancerDB
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  3. vista742[chr1:23778586-23778784]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista742[chr1:23778586-23778784]
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Tissue distribution of vista742
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Transcription factor that possibly regulate vista742[chr1:23778586-23778784]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23778622 23778626 NFE TRANSFAC yes 27434739
chr1 23778622 23778626 NFE TRANSFAC yes 118249363
chr1 23778628 23778643 RUNX2 JASPAR yes 27434740
chr1 23778628 23778643 RUNX2 JASPAR yes 118249364
chr1 23778631 23778642 RUNX1 JASPAR yes 27434741
chr1 23778631 23778642 RUNX1 JASPAR yes 118249365
chr1 23778632 23778642 RUNX3 JASPAR yes 27434742
chr1 23778632 23778642 RUNX3 JASPAR yes 118249366
chr1 23778663 23778674 TFAP2A JASPAR yes 27434743
chr1 23778663 23778674 TFAP2B JASPAR yes 27434744
chr1 23778663 23778674 TFAP2C JASPAR yes 27434745
chr1 23778663 23778674 TFAP2A JASPAR yes 118249367
chr1 23778663 23778674 TFAP2B JASPAR yes 118249368
chr1 23778663 23778674 TFAP2C JASPAR yes 118249369
chr1 23778664 23778673 TFAP2A JASPAR yes 27434746
chr1 23778664 23778673 TFAP2A JASPAR yes 118249370
chr1 23778669 23778673 LFA1 TRANSFAC yes 27434747
chr1 23778669 23778673 LFA1 TRANSFAC yes 118249371
chr1 23778674 23778680 MAZ TRANSFAC yes 27434748
chr1 23778674 23778680 MAZ TRANSFAC yes 118249372
chr1 23778674 23778685 E2F6 JASPAR yes 27434749
chr1 23778674 23778685 E2F6 JASPAR yes 118249373
chr1 23778705 23778716 EBF1 JASPAR yes 27434750
chr1 23778705 23778716 EBF1 JASPAR yes 118249374
chr1 23778706 23778718 TFAP2A JASPAR yes 27434751
chr1 23778706 23778718 TFAP2A JASPAR yes 118249375
chr1 23778711 23778725 PLAG1 JASPAR yes 27434752
chr1 23778711 23778725 PLAG1 JASPAR yes 118249376
chr1 23778719 23778737 ESR2 JASPAR yes 118249377
chr1 23778721 23778736 ESR2 JASPAR yes 118249378
chr1 23778721 23778741 ESR1 JASPAR yes 118249379
chr1 23778722 23778726 LFA1 TRANSFAC yes 118249380
chr1 23778747 23778751 NFE TRANSFAC yes 118249381
SNP sites on vista742[chr1:23778586-23778784]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23778649 rs535205297 T A,C no 158761
chr1 23778691 rs138895097 G A no 158762
chr1 23778700 rs116508150 C T no 158763
chr1 23778718 rs575722868 G A
PLAG1 TFAP2A
158764
chr1 23778735 rs530800482 CAG C
ESR1 ESR2
158765
chr1 23778735 rs543074352 C G
ESR1 ESR2
158766
chr1 23778754 rs373110074 CCTT C no 158767
Genes possibly regulated by vista742[chr1:23778586-23778784]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 23685941 23695935 - ZNF436 ENSG00000125945.10 23695935 0.65 0.99 311 17349
chr1 23695490 23698332 + C1orf213 ENSG00000249087.3 23695490 0.81 1.0 312 16904
chr1 23707554 23751233 - TCEA3 ENSG00000204219.5 23751233 0.85 0.99 313 72647
chr1 23755056 23811061 - ASAP3 ENSG00000088280.14 23811061 0.83 1.0 314 67723
chr1 23832922 23857712 - E2F2 ENSG00000007968.6 23857712 0.97 0.99 315 21072
Expression level of Genes
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miRNAs possibly regulated by vista742[chr1:23778586-23778784]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results