EnhancerDB
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  3. vista756[chr1:23977708-23977880]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista756[chr1:23977708-23977880]
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Tissue distribution of vista756
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Transcription factor that possibly regulate vista756[chr1:23977708-23977880]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23977713 23977719 TCF4 TRANSFAC yes 27453192
chr1 23977713 23977719 TCF4 TRANSFAC yes 118250039
chr1 23977726 23977729 MYB TRANSFAC yes 27453193
chr1 23977726 23977729 MYB TRANSFAC yes 118250040
chr1 23977730 23977744 NR2F1 JASPAR yes 27453194
chr1 23977730 23977744 NR2F1 JASPAR yes 118250041
chr1 23977764 23977782 NFYA JASPAR yes 27453195
chr1 23977764 23977782 NFYA JASPAR yes 118250042
chr1 23977767 23977783 NFYA JASPAR yes 27453196
chr1 23977767 23977783 NFYA JASPAR yes 118250043
chr1 23977770 23977783 DUXA JASPAR yes 27453197
chr1 23977770 23977783 DUXA JASPAR yes 118250044
chr1 23977770 23977785 NFYB JASPAR yes 27453198
chr1 23977770 23977785 NFYB JASPAR yes 118250045
chr1 23977771 23977782 DUX4 JASPAR yes 27453199
chr1 23977771 23977782 DUX4 JASPAR yes 118250046
chr1 23977772 23977777 NFY TRANSFAC yes 27453200
chr1 23977772 23977777 NFY TRANSFAC yes 118250047
chr1 23977792 23977796 H4TF2 TRANSFAC yes 27453201
chr1 23977792 23977796 H4TF2 TRANSFAC yes 118250048
chr1 23977796 23977809 ZBTB18 JASPAR yes 27453202
chr1 23977796 23977809 ZBTB18 JASPAR yes 118250049
chr1 23977807 23977821 EBF1 JASPAR yes 27453203
chr1 23977807 23977821 EBF1 JASPAR yes 118250050
chr1 23977808 23977819 EBF1 JASPAR yes 27453204
chr1 23977808 23977819 EBF1 JASPAR yes 118250051
chr1 23977809 23977820 EBF1 JASPAR yes 27453205
chr1 23977809 23977820 EBF1 JASPAR yes 118250052
chr1 23977818 23977824 HiNF-A TRANSFAC yes 27453206
chr1 23977818 23977824 HiNF-A TRANSFAC yes 118250053
chr1 23977828 23977834 ATF1 TRANSFAC yes 27453207
chr1 23977828 23977834 ATF1 TRANSFAC yes 118250054
chr1 23977833 23977848 TFAP2A JASPAR yes 27453208
chr1 23977833 23977848 TFAP2C JASPAR yes 27453209
chr1 23977833 23977848 TFAP2A JASPAR yes 118250055
chr1 23977833 23977848 TFAP2C JASPAR yes 118250056
chr1 23977836 23977848 TFAP2A JASPAR yes 27453210
chr1 23977836 23977848 TFAP2B JASPAR yes 27453211
chr1 23977836 23977848 TFAP2C JASPAR yes 27453212
chr1 23977836 23977848 TFAP2A JASPAR yes 118250057
chr1 23977836 23977848 TFAP2B JASPAR yes 118250058
chr1 23977836 23977848 TFAP2C JASPAR yes 118250059
chr1 23977837 23977846 TFAP2A JASPAR yes 27453213
chr1 23977837 23977846 TFAP2A JASPAR yes 118250060
chr1 23977843 23977847 LFA1 TRANSFAC yes 27453214
chr1 23977843 23977847 LFA1 TRANSFAC yes 118250061
chr1 23977875 23977890 PRDM1 JASPAR yes 27453215
chr1 23977875 23977890 PRDM1 JASPAR yes 118250062
SNP sites on vista756[chr1:23977708-23977880]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23977784 rs34299617 A C
NFYB
160530
chr1 23977786 rs575258148 T A no 160531
chr1 23977805 rs111963787 T C
ZBTB18
160532
chr1 23977831 rs34415385 C T
ATF1
160533
chr1 23977871 rs10917407 T C no 160534
Genes possibly regulated by vista756[chr1:23977708-23977880]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 23884409 23886285 - ID3 ENSG00000117318.8 23886285 0.75 1.0 316 8577
chr1 23907985 23967058 + MDS2 ENSG00000197880.4 23907985 0.92 1.0 317 30277
chr1 24018269 24022915 + RPL11 ENSG00000142676.8 24018269 0.64 1.0 318 59611
chr1 24069645 24088549 + TCEB3 ENSG00000011007.8 24069645 0.6 0.99 319 8235
Expression level of Genes
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miRNAs possibly regulated by vista756[chr1:23977708-23977880]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results