EnhancerDB
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  3. vista776[chr1:24712127-24712358]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista776[chr1:24712127-24712358]
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Tissue distribution of vista776
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Transcription factor that possibly regulate vista776[chr1:24712127-24712358]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 24712119 24712133 GATA2 JASPAR yes 27502081
chr1 24712119 24712133 GATA2 JASPAR yes 118251034
chr1 24712121 24712129 GATA3 JASPAR yes 27502082
chr1 24712121 24712129 GATA5 JASPAR yes 27502083
chr1 24712121 24712129 GATA3 JASPAR yes 118251035
chr1 24712121 24712129 GATA5 JASPAR yes 118251036
chr1 24712133 24712143 HMBOX1 JASPAR yes 27502084
chr1 24712133 24712143 HMBOX1 JASPAR yes 118251037
chr1 24712135 24712138 MYB TRANSFAC yes 27502085
chr1 24712135 24712138 MYB TRANSFAC yes 118251038
chr1 24712157 24712177 ESR1 JASPAR yes 27502086
chr1 24712157 24712177 ESR1 JASPAR yes 118251039
chr1 24712162 24712177 ESR2 JASPAR yes 27502087
chr1 24712162 24712177 ESR2 JASPAR yes 118251040
chr1 24712170 24712185 RUNX2 JASPAR yes 27502088
chr1 24712170 24712185 RUNX2 JASPAR yes 118251041
chr1 24712190 24712193 MYB TRANSFAC yes 27502089
chr1 24712190 24712193 MYB TRANSFAC yes 118251042
chr1 24712190 24712201 RUNX1 JASPAR yes 27502090
chr1 24712190 24712201 RUNX1 JASPAR yes 118251043
chr1 24712215 24712226 PHOX2A JASPAR yes 27502091
chr1 24712215 24712226 PROP1 JASPAR yes 27502092
chr1 24712215 24712226 PHOX2A JASPAR yes 118251044
chr1 24712215 24712226 PROP1 JASPAR yes 118251045
chr1 24712228 24712238 GSC2 JASPAR yes 27502093
chr1 24712228 24712238 GSC2 JASPAR yes 118251046
chr1 24712229 24712237 OTX1 JASPAR yes 27502094
chr1 24712229 24712237 OTX2 JASPAR yes 27502095
chr1 24712229 24712237 OTX1 JASPAR yes 118251047
chr1 24712229 24712237 OTX2 JASPAR yes 118251048
chr1 24712234 24712240 TBP TRANSFAC yes 27502096
chr1 24712234 24712240 TBP TRANSFAC yes 118251049
chr1 24712242 24712248 MZF1 JASPAR yes 27502097
chr1 24712242 24712248 MZF1 JASPAR yes 118251050
chr1 24712250 24712264 JUN JASPAR yes 27502098
chr1 24712250 24712264 JUN JASPAR yes 118251051
chr1 24712252 24712263 BATF JASPAR yes 27502099
chr1 24712252 24712263 BATF JASPAR yes 118251052
chr1 24712254 24712265 FOS JASPAR yes 27502100
chr1 24712254 24712265 JUND JASPAR yes 27502101
chr1 24712254 24712265 FOS JASPAR yes 118251053
chr1 24712254 24712265 JUND JASPAR yes 118251054
chr1 24712256 24712262 JUN TRANSFAC yes 27502102
chr1 24712256 24712262 JUN TRANSFAC yes 118251055
chr1 24712295 24712303 NR4A2 JASPAR yes 27502103
chr1 24712295 24712303 NR4A2 JASPAR yes 118251056
chr1 24712321 24712335 SPI1 JASPAR yes 27502104
chr1 24712321 24712335 SPIC JASPAR yes 27502105
chr1 24712321 24712335 SPI1 JASPAR yes 118251057
chr1 24712321 24712335 SPIC JASPAR yes 118251058
chr1 24712323 24712341 SRF JASPAR yes 27502106
chr1 24712323 24712341 SRF JASPAR yes 118251059
chr1 24712324 24712329 ETS2 TRANSFAC yes 27502107
chr1 24712324 24712329 ETS2 TRANSFAC yes 118251060
chr1 24712329 24712333 YY1 TRANSFAC yes 27502108
chr1 24712329 24712333 YY1 TRANSFAC yes 118251061
SNP sites on vista776[chr1:24712127-24712358]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 24712169 rs2244762 T C
ESR1 ESR2
165230
chr1 24712277 rs549156136 C T no 165231
chr1 24712345 rs145184730 G C no 165232
chr1 24712349 rs2477303 T A no 165233
Genes possibly regulated by vista776[chr1:24712127-24712358]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 24645812 24690972 + GRHL3 ENSG00000158055.11 24645812 0.99 0.99 331 33685
chr1 24683489 24743424 - STPG1 ENSG00000001460.13 24743424 0.83 1.0 332 68934
chr1 24742284 24799466 + NIPAL3 ENSG00000001461.12 24742284 0.75 1.0 333 70074
Expression level of Genes
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miRNAs possibly regulated by vista776[chr1:24712127-24712358]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results