EnhancerDB
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  3. vista781[chr1:24808566-24808646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista781[chr1:24808566-24808646]
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Tissue distribution of vista781
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Transcription factor that possibly regulate vista781[chr1:24808566-24808646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 24808564 24808579 FOXP1 JASPAR yes 27506003
chr1 24808564 24808579 FOXP1 JASPAR yes 118251106
chr1 24808565 24808580 FOXP1 JASPAR yes 27506004
chr1 24808565 24808580 FOXP1 JASPAR yes 118251107
chr1 24808566 24808572 TBP TRANSFAC yes 27506005
chr1 24808566 24808572 TBP TRANSFAC yes 118251108
chr1 24808566 24808581 FOXP1 JASPAR yes 27506006
chr1 24808566 24808581 FOXP1 JASPAR yes 118251109
chr1 24808566 24808587 IRF1 JASPAR yes 27506007
chr1 24808566 24808587 IRF1 JASPAR yes 118251110
chr1 24808567 24808582 FOXP1 JASPAR yes 27506008
chr1 24808567 24808582 FOXP1 JASPAR yes 118251111
chr1 24808568 24808589 IRF1 JASPAR yes 27506009
chr1 24808568 24808589 IRF1 JASPAR yes 118251112
chr1 24808569 24808584 FOXP1 JASPAR yes 27506010
chr1 24808569 24808584 FOXP1 JASPAR yes 118251113
chr1 24808574 24808595 IRF1 JASPAR yes 27506011
chr1 24808574 24808595 IRF1 JASPAR yes 118251114
chr1 24808580 24808601 IRF1 JASPAR yes 27506012
chr1 24808580 24808601 IRF1 JASPAR yes 118251115
chr1 24808587 24808592 ETS2 TRANSFAC yes 27506013
chr1 24808587 24808592 ETS2 TRANSFAC yes 118251116
chr1 24808588 24808602 STAT1 JASPAR yes 27506014
chr1 24808588 24808602 STAT1 JASPAR yes 118251117
chr1 24808596 24808611 ZIC4 JASPAR yes 27506015
chr1 24808596 24808611 ZIC4 JASPAR yes 118251118
chr1 24808597 24808611 ZIC1 JASPAR yes 27506016
chr1 24808597 24808611 ZIC1 JASPAR yes 118251119
chr1 24808615 24808628 ELF1 JASPAR yes 27506017
chr1 24808615 24808628 ELF1 JASPAR yes 118251120
chr1 24808621 24808625 NFE TRANSFAC yes 27506018
chr1 24808621 24808625 NFE TRANSFAC yes 118251121
chr1 24808631 24808644 JUN JASPAR yes 27506019
chr1 24808631 24808644 JUN JASPAR yes 118251122
chr1 24808635 24808651 SOX4 JASPAR yes 27506020
chr1 24808635 24808651 SOX4 JASPAR yes 118251123
SNP sites on vista781[chr1:24808566-24808646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 24808599 rs186140207 A T
IRF1 STAT1 ZIC1 ZIC4
165670
Genes possibly regulated by vista781[chr1:24808566-24808646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 24683489 24743424 - STPG1 ENSG00000001460.13 24743424 0.83 1.0 332 34858
chr1 24742284 24799466 + NIPAL3 ENSG00000001461.12 24742284 0.75 1.0 333 33718
chr1 24829387 24867530 + RCAN3 ENSG00000117602.7 24829387 0.93 0.99 334 79259
chr1 24882602 24935819 + NCMAP ENSG00000184454.6 24882602 0.88 1.0 335 26044
Expression level of Genes
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miRNAs possibly regulated by vista781[chr1:24808566-24808646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results