EnhancerDB
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  3. vista790[chr1:25011612-25011937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista790[chr1:25011612-25011937]
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Tissue distribution of vista790
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Transcription factor that possibly regulate vista790[chr1:25011612-25011937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25011608 25011623 MEF2C JASPAR yes 27517857
chr1 25011608 25011623 MEF2C JASPAR yes 118251542
chr1 25011611 25011626 FOXP1 JASPAR yes 27517858
chr1 25011611 25011626 FOXP1 JASPAR yes 118251543
chr1 25011612 25011627 FOXP1 JASPAR yes 27517859
chr1 25011612 25011627 FOXP1 JASPAR yes 118251544
chr1 25011613 25011628 FOXP1 JASPAR yes 27517860
chr1 25011613 25011628 FOXP1 JASPAR yes 118251545
chr1 25011614 25011629 FOXP1 JASPAR yes 27517861
chr1 25011614 25011629 FOXP1 JASPAR yes 118251546
chr1 25011614 25011635 IRF1 JASPAR yes 27517862
chr1 25011614 25011635 IRF1 JASPAR yes 118251547
chr1 25011615 25011630 FOXP1 JASPAR yes 27517863
chr1 25011615 25011630 FOXP1 JASPAR yes 118251548
chr1 25011618 25011633 PRDM1 JASPAR yes 27517864
chr1 25011618 25011633 STAT2 JASPAR yes 27517865
chr1 25011618 25011633 PRDM1 JASPAR yes 118251549
chr1 25011618 25011633 STAT2 JASPAR yes 118251550
chr1 25011620 25011641 IRF1 JASPAR yes 27517866
chr1 25011620 25011641 IRF1 JASPAR yes 118251551
chr1 25011622 25011637 IRF9 JASPAR yes 27517867
chr1 25011622 25011637 IRF9 JASPAR yes 118251552
chr1 25011623 25011637 IRF7 JASPAR yes 27517868
chr1 25011623 25011637 IRF7 JASPAR yes 118251553
chr1 25011624 25011639 PRDM1 JASPAR yes 27517869
chr1 25011624 25011639 PRDM1 JASPAR yes 118251554
chr1 25011625 25011637 IRF1 JASPAR yes 27517870
chr1 25011625 25011637 IRF1 JASPAR yes 118251555
chr1 25011656 25011667 FOSL2 JASPAR yes 27517871
chr1 25011656 25011667 FOSL2 JASPAR yes 118251556
chr1 25011658 25011671 SMAD2 JASPAR yes 27517872
chr1 25011658 25011671 SMAD2 JASPAR yes 118251557
chr1 25011661 25011671 TBR1 JASPAR yes 27517873
chr1 25011661 25011671 TBR1 JASPAR yes 118251558
chr1 25011662 25011672 TBX21 JASPAR yes 27517874
chr1 25011662 25011672 TBX21 JASPAR yes 118251559
chr1 25011663 25011671 MGA JASPAR yes 27517875
chr1 25011663 25011671 TBX15 JASPAR yes 27517876
chr1 25011663 25011671 TBX1 JASPAR yes 27517877
chr1 25011663 25011671 TBX4 JASPAR yes 27517878
chr1 25011663 25011671 TBX5 JASPAR yes 27517879
chr1 25011663 25011671 MGA JASPAR yes 118251560
chr1 25011663 25011671 TBX15 JASPAR yes 118251561
chr1 25011663 25011671 TBX1 JASPAR yes 118251562
chr1 25011663 25011671 TBX4 JASPAR yes 118251563
chr1 25011663 25011671 TBX5 JASPAR yes 118251564
chr1 25011663 25011672 ZEB1 JASPAR yes 27517880
chr1 25011663 25011672 ZEB1 JASPAR yes 118251565
chr1 25011663 25011675 PKNOX1 JASPAR yes 27517881
chr1 25011663 25011675 TGIF1 JASPAR yes 27517882
chr1 25011663 25011675 PKNOX1 JASPAR yes 118251566
chr1 25011663 25011675 TGIF1 JASPAR yes 118251567
chr1 25011663 25011676 ZBTB18 JASPAR yes 27517883
chr1 25011663 25011676 ZBTB18 JASPAR yes 118251568
chr1 25011664 25011674 FIGLA JASPAR yes 27517884
chr1 25011664 25011674 ID4 JASPAR yes 27517885
chr1 25011664 25011674 TCF3 JASPAR yes 27517886
chr1 25011664 25011674 TCF4 JASPAR yes 27517887
chr1 25011664 25011674 FIGLA JASPAR yes 118251569
chr1 25011664 25011674 ID4 JASPAR yes 118251570
chr1 25011664 25011674 TCF3 JASPAR yes 118251571
chr1 25011664 25011674 TCF4 JASPAR yes 118251572
chr1 25011665 25011674 SNAI2 JASPAR yes 27517888
chr1 25011665 25011674 SNAI2 JASPAR yes 118251573
chr1 25011666 25011671 USF2 TRANSFAC yes 27517889
chr1 25011666 25011671 USF2 TRANSFAC yes 118251574
chr1 25011672 25011693 LUN1 TRANSFAC yes 27517890
chr1 25011672 25011693 LUN1 TRANSFAC yes 118251575
chr1 25011689 25011703 PLAG1 JASPAR yes 27517891
chr1 25011689 25011703 PLAG1 JASPAR yes 118251576
chr1 25011696 25011701 SP1 TRANSFAC yes 27517892
chr1 25011696 25011701 SP1 TRANSFAC yes 118251577
chr1 25011697 25011702 SP1 TRANSFAC yes 27517893
chr1 25011697 25011702 SP1 TRANSFAC yes 118251578
chr1 25011700 25011705 SP1 TRANSFAC yes 27517894
chr1 25011700 25011705 SP1 TRANSFAC yes 118251579
chr1 25011709 25011722 NR2F1 JASPAR yes 27517895
chr1 25011709 25011722 NR2F1 JASPAR yes 118251580
chr1 25011713 25011717 ESR1 TRANSFAC yes 27517896
chr1 25011713 25011717 ESR1 TRANSFAC yes 118251581
chr1 25011725 25011743 NR3C1 JASPAR yes 27517897
chr1 25011725 25011743 NR3C1 JASPAR yes 118251582
chr1 25011742 25011754 IRF1 JASPAR yes 27517898
chr1 25011742 25011754 IRF1 JASPAR yes 118251583
chr1 25011760 25011775 MEF2C JASPAR yes 27517899
chr1 25011760 25011775 MEF2C JASPAR yes 118251584
chr1 25011761 25011776 MEF2A JASPAR yes 27517900
chr1 25011761 25011776 MEF2A JASPAR yes 118251585
chr1 25011762 25011774 MEF2A JASPAR yes 27517901
chr1 25011762 25011774 MEF2B JASPAR yes 27517902
chr1 25011762 25011774 MEF2D JASPAR yes 27517903
chr1 25011762 25011774 MEF2A JASPAR yes 118251586
chr1 25011762 25011774 MEF2B JASPAR yes 118251587
chr1 25011762 25011774 MEF2D JASPAR yes 118251588
chr1 25011779 25011800 REST JASPAR yes 27517904
chr1 25011779 25011800 REST JASPAR yes 118251589
chr1 25011780 25011799 REST JASPAR yes 27517905
chr1 25011780 25011799 REST JASPAR yes 118251590
chr1 25011784 25011794 SP1 JASPAR yes 27517906
chr1 25011784 25011794 SP1 JASPAR yes 118251591
chr1 25011791 25011803 ZBTB7B JASPAR yes 27517907
chr1 25011791 25011803 ZBTB7C JASPAR yes 27517908
chr1 25011791 25011803 ZBTB7B JASPAR yes 118251592
chr1 25011791 25011803 ZBTB7C JASPAR yes 118251593
chr1 25011792 25011804 ZBTB7A JASPAR yes 27517909
chr1 25011792 25011804 ZBTB7A JASPAR yes 118251594
chr1 25011794 25011799 SP1 TRANSFAC yes 27517910
chr1 25011794 25011799 SP1 TRANSFAC yes 118251595
chr1 25011848 25011867 CTCF JASPAR yes 27517911
chr1 25011848 25011867 CTCF JASPAR yes 118251596
chr1 25011854 25011875 ZNF263 JASPAR yes 27517912
chr1 25011854 25011875 ZNF263 JASPAR yes 118251597
chr1 25011901 25011920 PAX5 JASPAR yes 27517913
chr1 25011901 25011920 PAX5 JASPAR yes 118251598
chr1 25011905 25011916 NFE2L2 JASPAR yes 27517914
chr1 25011905 25011916 NFE2L2 JASPAR yes 118251599
chr1 25011925 25011940 FOXP1 JASPAR yes 27517915
chr1 25011925 25011940 FOXP1 JASPAR yes 118251600
chr1 25011926 25011941 FOXP1 JASPAR yes 27517916
chr1 25011926 25011941 FOXP1 JASPAR yes 118251601
chr1 25011927 25011942 FOXP1 JASPAR yes 27517917
chr1 25011927 25011942 FOXP1 JASPAR yes 118251602
chr1 25011927 25011948 IRF1 JASPAR yes 27517918
chr1 25011927 25011948 IRF1 JASPAR yes 118251603
chr1 25011928 25011943 FOXP1 JASPAR yes 27517919
chr1 25011928 25011943 FOXP1 JASPAR yes 118251604
chr1 25011929 25011944 FOXP1 JASPAR yes 27517920
chr1 25011929 25011944 FOXP1 JASPAR yes 118251605
SNP sites on vista790[chr1:25011612-25011937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25011712 rs150204791 G A
NR2F1
167004
chr1 25011810 rs190303509 T C no 167005
Genes possibly regulated by vista790[chr1:25011612-25011937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 24958207 24999758 + SRRM1 ENSG00000133226.12 24958207 0.73 0.99 336 46595
chr1 25071848 25170815 + CLIC4 ENSG00000169504.10 25071848 0.7 0.99 337 40089
Expression level of Genes
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miRNAs possibly regulated by vista790[chr1:25011612-25011937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results