EnhancerDB
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  3. vista796[chr1:25237083-25237520]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista796[chr1:25237083-25237520]
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Tissue distribution of vista796
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Transcription factor that possibly regulate vista796[chr1:25237083-25237520]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25237126 25237131 GATA1 TRANSFAC yes 27543794
chr1 25237126 25237131 GATA1 TRANSFAC yes 118251788
chr1 25237146 25237160 GLIS2 JASPAR yes 27543795
chr1 25237146 25237160 GLIS2 JASPAR yes 118251789
chr1 25237154 25237159 SP1 TRANSFAC yes 27543796
chr1 25237154 25237159 SP1 TRANSFAC yes 118251790
chr1 25237161 25237175 PLAG1 JASPAR yes 27543797
chr1 25237161 25237175 PLAG1 JASPAR yes 118251791
chr1 25237216 25237220 H1TF2 TRANSFAC yes 27543798
chr1 25237216 25237220 NFE TRANSFAC yes 27543799
chr1 25237216 25237220 SRF TRANSFAC yes 27543800
chr1 25237216 25237220 H1TF2 TRANSFAC yes 118251792
chr1 25237216 25237220 NFE TRANSFAC yes 118251793
chr1 25237216 25237220 SRF TRANSFAC yes 118251794
chr1 25237220 25237239 REST JASPAR yes 27543801
chr1 25237220 25237239 REST JASPAR yes 118251795
chr1 25237222 25237234 INSM1 JASPAR yes 27543802
chr1 25237222 25237234 INSM1 JASPAR yes 118251796
chr1 25237244 25237263 CTCF JASPAR yes 27543803
chr1 25237244 25237263 CTCF JASPAR yes 118251797
chr1 25237270 25237274 YY1 TRANSFAC yes 27543804
chr1 25237270 25237274 YY1 TRANSFAC yes 118251798
chr1 25237273 25237287 TLX1 JASPAR yes 27543805
chr1 25237273 25237287 TLX1 JASPAR yes 118251799
chr1 25237273 25237288 HNF4A JASPAR yes 27543806
chr1 25237273 25237288 HNF4A JASPAR yes 118251800
chr1 25237308 25237327 RFX2 JASPAR yes 27543807
chr1 25237308 25237327 RFX2 JASPAR yes 118251801
chr1 25237310 25237325 RFX5 JASPAR yes 27543808
chr1 25237310 25237325 RFX5 JASPAR yes 118251802
chr1 25237313 25237322 NFIX JASPAR yes 27543809
chr1 25237313 25237322 NFIX JASPAR yes 118251803
chr1 25237314 25237320 NFIC JASPAR yes 27543810
chr1 25237314 25237320 NFIC JASPAR yes 118251804
chr1 25237320 25237326 SOX10 JASPAR yes 27543811
chr1 25237320 25237326 SOX10 JASPAR yes 118251805
chr1 25237327 25237335 FOXO3 JASPAR yes 27543812
chr1 25237327 25237335 FOXO3 JASPAR yes 118251806
chr1 25237336 25237348 INSM1 JASPAR yes 27543813
chr1 25237336 25237348 INSM1 JASPAR yes 118251807
chr1 25237379 25237393 EBF1 JASPAR yes 27543814
chr1 25237379 25237393 EBF1 JASPAR yes 118251808
chr1 25237386 25237391 TFAP2A TRANSFAC yes 27543815
chr1 25237386 25237391 TFAP2A TRANSFAC yes 118251809
chr1 25237386 25237392 MZF1 JASPAR yes 27543816
chr1 25237386 25237392 MZF1 JASPAR yes 118251810
chr1 25237387 25237397 SP1 JASPAR yes 27543817
chr1 25237387 25237397 SP1 JASPAR yes 118251811
chr1 25237394 25237398 LFA1 TRANSFAC yes 27543818
chr1 25237394 25237398 LFA1 TRANSFAC yes 118251812
chr1 25237399 25237409 MAX JASPAR yes 27543819
chr1 25237399 25237409 MAX JASPAR yes 118251813
chr1 25237399 25237410 USF1 JASPAR yes 27543820
chr1 25237399 25237410 USF2 JASPAR yes 27543821
chr1 25237399 25237410 USF1 JASPAR yes 118251814
chr1 25237399 25237410 USF2 JASPAR yes 118251815
chr1 25237400 25237410 BHLHE40 JASPAR yes 27543822
chr1 25237400 25237410 BHLHE41 JASPAR yes 27543823
chr1 25237400 25237410 MLXIPL JASPAR yes 27543824
chr1 25237400 25237410 MLX JASPAR yes 27543825
chr1 25237400 25237410 SREBF2 JASPAR yes 27543826
chr1 25237400 25237410 TFE3 JASPAR yes 27543827
chr1 25237400 25237410 TFEB JASPAR yes 27543828
chr1 25237400 25237410 BHLHE40 JASPAR yes 118251816
chr1 25237400 25237410 BHLHE41 JASPAR yes 118251817
chr1 25237400 25237410 MLXIPL JASPAR yes 118251818
chr1 25237400 25237410 MLX JASPAR yes 118251819
chr1 25237400 25237410 SREBF2 JASPAR yes 118251820
chr1 25237400 25237410 TFE3 JASPAR yes 118251821
chr1 25237400 25237410 TFEB JASPAR yes 118251822
chr1 25237402 25237407 MYC TRANSFAC yes 27543829
chr1 25237402 25237407 USF1 TRANSFAC yes 27543830
chr1 25237402 25237407 USF2 TRANSFAC yes 27543831
chr1 25237402 25237407 MYC TRANSFAC yes 118251823
chr1 25237402 25237407 USF1 TRANSFAC yes 118251824
chr1 25237402 25237407 USF2 TRANSFAC yes 118251825
chr1 25237418 25237428 SP1 JASPAR yes 27543832
chr1 25237418 25237428 SP1 JASPAR yes 118251826
chr1 25237426 25237431 SP1 TRANSFAC yes 27543833
chr1 25237426 25237431 SP1 TRANSFAC yes 118251827
chr1 25237429 25237434 SP1 TRANSFAC yes 27543834
chr1 25237429 25237434 SP1 TRANSFAC yes 118251828
chr1 25237430 25237445 TFAP2C JASPAR yes 27543835
chr1 25237430 25237445 TFAP2C JASPAR yes 118251829
chr1 25237441 25237451 MZF1 JASPAR yes 27543836
chr1 25237441 25237451 MZF1 JASPAR yes 118251830
chr1 25237444 25237449 TFAP2A TRANSFAC yes 27543837
chr1 25237444 25237449 TFAP2A TRANSFAC yes 118251831
chr1 25237444 25237450 MZF1 JASPAR yes 27543838
chr1 25237444 25237450 MZF1 JASPAR yes 118251832
chr1 25237452 25237468 ZNF143 JASPAR yes 27543839
chr1 25237452 25237468 ZNF143 JASPAR yes 118251833
chr1 25237463 25237473 REL JASPAR yes 27543840
chr1 25237463 25237473 REL JASPAR yes 118251834
chr1 25237469 25237474 USF2 TRANSFAC yes 27543841
chr1 25237469 25237474 USF2 TRANSFAC yes 118251835
chr1 25237486 25237493 CEBPA TRANSFAC yes 27543842
chr1 25237486 25237493 CEBPA TRANSFAC yes 118251836
chr1 25237491 25237495 LFA1 TRANSFAC yes 27543843
chr1 25237491 25237495 LFA1 TRANSFAC yes 118251837
chr1 25237517 25237521 H1TF2 TRANSFAC yes 27543844
chr1 25237517 25237521 NFE TRANSFAC yes 27543845
chr1 25237517 25237521 SRF TRANSFAC yes 27543846
chr1 25237517 25237521 H1TF2 TRANSFAC yes 118251838
chr1 25237517 25237521 NFE TRANSFAC yes 118251839
chr1 25237517 25237521 SRF TRANSFAC yes 118251840
SNP sites on vista796[chr1:25237083-25237520]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25237335 rs143503767 A C
FOXO3
169297
chr1 25237442 rs182400650 G A
MZF1 TFAP2C
169298
chr1 25237503 rs150972362 G T no 169299
chr1 25237507 rs190042010 G A,C no 169300
Genes possibly regulated by vista796[chr1:25237083-25237520]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 45908
Expression level of Genes
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miRNAs possibly regulated by vista796[chr1:25237083-25237520]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 25245836 25245856 - hsa-miR-6731-3p MIMAT0027364 25256766 0.00010273796681563672 0.0 0.0 23
Expression level of miRNAs
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