EnhancerDB
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  3. vista80[chr1:2501788-2502413]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista80[chr1:2501788-2502413]
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Tissue distribution of vista80
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Transcription factor that possibly regulate vista80[chr1:2501788-2502413]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 2501797 2501808 BATF JASPAR yes 118217127
chr1 2501805 2501808 MYB TRANSFAC yes 118217128
chr1 2501805 2501815 HINFP JASPAR yes 118217129
chr1 2501828 2501839 EBF1 JASPAR yes 118217130
chr1 2501828 2501840 TFAP2A JASPAR yes 118217131
chr1 2501828 2501840 TFAP2C JASPAR yes 118217132
chr1 2501835 2501840 SP1 TRANSFAC yes 118217133
chr1 2501840 2501848 MEIS2 JASPAR yes 118217134
chr1 2501840 2501848 MEIS3 JASPAR yes 118217135
chr1 2501841 2501845 NFE TRANSFAC yes 118217136
chr1 2501878 2501884 ETS1 JASPAR yes 118217137
chr1 2501878 2501896 MAFF JASPAR yes 118217138
chr1 2501886 2501890 NFE TRANSFAC yes 118217139
chr1 2501893 2501908 TFAP2C JASPAR yes 118217140
chr1 2501911 2501921 SREBF1 JASPAR yes 118217141
chr1 2501938 2501952 GLIS3 JASPAR yes 118217142
chr1 2501949 2501964 RUNX2 JASPAR yes 118217143
chr1 2501957 2501976 CTCF JASPAR yes 118217144
chr1 2501966 2501972 YY1 JASPAR yes 118217145
chr1 2501975 2501981 ETS1 JASPAR yes 118217146
chr1 2502018 2502032 CREB3 JASPAR yes 118217147
chr1 2502018 2502032 CREB3L1 JASPAR yes 118217148
chr1 2502019 2502033 XBP1 JASPAR yes 118217149
chr1 2502021 2502026 ATF1 TRANSFAC yes 118217150
chr1 2502031 2502035 NFE TRANSFAC yes 118217151
chr1 2502037 2502050 ELF3 JASPAR yes 118217152
chr1 2502038 2502048 ETV6 JASPAR yes 118217153
chr1 2502038 2502049 ELF5 JASPAR yes 118217154
chr1 2502038 2502050 EHF JASPAR yes 118217155
chr1 2502038 2502050 ELF4 JASPAR yes 118217156
chr1 2502038 2502051 ELF1 JASPAR yes 118217157
chr1 2502039 2502046 SPI1 JASPAR yes 118217158
chr1 2502039 2502047 EHF JASPAR yes 118217159
chr1 2502084 2502098 PLAG1 JASPAR yes 118217160
chr1 2502085 2502095 NEUROD2 JASPAR yes 118217161
chr1 2502085 2502095 OLIG2 JASPAR yes 118217162
chr1 2502085 2502095 OLIG3 JASPAR yes 118217163
chr1 2502089 2502104 JUND JASPAR yes 118217164
chr1 2502090 2502103 JUN JASPAR yes 118217165
chr1 2502123 2502127 H1TF2 TRANSFAC yes 118217166
chr1 2502123 2502127 NFE TRANSFAC yes 118217167
chr1 2502123 2502127 SRF TRANSFAC yes 118217168
chr1 2502157 2502172 HSF1 JASPAR yes 118217169
chr1 2502158 2502171 HSF4 JASPAR yes 118217170
chr1 2502174 2502190 NFYA JASPAR yes 118217171
chr1 2502179 2502183 H1TF2 TRANSFAC yes 118217172
chr1 2502179 2502183 NFE TRANSFAC yes 118217173
chr1 2502179 2502183 SRF TRANSFAC yes 118217174
chr1 2502183 2502186 MYB TRANSFAC yes 118217175
chr1 2502189 2502199 GSC2 JASPAR yes 118217176
chr1 2502189 2502199 GSC JASPAR yes 118217177
chr1 2502190 2502198 OTX2 JASPAR yes 118217178
chr1 2502190 2502199 PITX3 JASPAR yes 118217179
chr1 2502196 2502209 ZBTB18 JASPAR yes 118217180
chr1 2502198 2502208 ID4 JASPAR yes 118217181
chr1 2502198 2502208 TCF3 JASPAR yes 118217182
chr1 2502198 2502208 TCF4 JASPAR yes 118217183
chr1 2502200 2502209 ZEB1 JASPAR yes 118217184
chr1 2502201 2502209 TBX5 JASPAR yes 118217185
chr1 2502206 2502217 FOSL2 JASPAR yes 118217186
chr1 2502208 2502221 SMAD2 JASPAR yes 118217187
chr1 2502211 2502221 TBR1 JASPAR yes 118217188
chr1 2502212 2502222 TBX21 JASPAR yes 118217189
chr1 2502213 2502221 MGA JASPAR yes 118217190
chr1 2502213 2502221 TBX15 JASPAR yes 118217191
chr1 2502213 2502221 TBX1 JASPAR yes 118217192
chr1 2502213 2502221 TBX4 JASPAR yes 118217193
chr1 2502213 2502221 TBX5 JASPAR yes 118217194
chr1 2502213 2502222 ZEB1 JASPAR yes 118217195
chr1 2502213 2502225 PKNOX1 JASPAR yes 118217196
chr1 2502213 2502225 TGIF1 JASPAR yes 118217197
chr1 2502213 2502226 ZBTB18 JASPAR yes 118217198
chr1 2502214 2502224 FIGLA JASPAR yes 118217199
chr1 2502214 2502224 ID4 JASPAR yes 118217200
chr1 2502214 2502224 TCF3 JASPAR yes 118217201
chr1 2502214 2502224 TCF4 JASPAR yes 118217202
chr1 2502215 2502224 SNAI2 JASPAR yes 118217203
chr1 2502216 2502221 USF2 TRANSFAC yes 118217204
chr1 2502302 2502320 SRF JASPAR yes 118217205
chr1 2502341 2502350 ZEB1 JASPAR yes 118217206
chr1 2502341 2502354 ZBTB18 JASPAR yes 118217207
chr1 2502342 2502352 FIGLA JASPAR yes 118217208
chr1 2502342 2502352 ID4 JASPAR yes 118217209
chr1 2502342 2502352 TCF3 JASPAR yes 118217210
chr1 2502342 2502352 TCF4 JASPAR yes 118217211
chr1 2502344 2502349 USF2 TRANSFAC yes 118217212
chr1 2502366 2502387 ZNF263 JASPAR yes 118217213
chr1 2502373 2502380 CEBPA TRANSFAC yes 118217214
chr1 2502374 2502385 E2F6 JASPAR yes 118217215
chr1 2502386 2502391 MYC TRANSFAC yes 118217216
SNP sites on vista80[chr1:2501788-2502413]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 2501917 rs114175311 G A
SREBF1
15086
chr1 2501952 rs145888432 C G,T
GLIS3 RUNX2
15087
chr1 2502010 rs10797433 T C no 15088
chr1 2502026 rs59274108 G A
ATF1 CREB3 CREB3L1 XBP1
15089
chr1 2502087 rs181116689 C T
NEUROD2 OLIG2 OLIG3 PLAG1
15090
chr1 2502364 rs550151518 T C no 15091
chr1 2502398 rs58394094 G A no 15092
Genes possibly regulated by vista80[chr1:2501788-2502413]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 2439972 2458039 - PANK4 ENSG00000157881.9 2458039 0.53 1.0 67 56251
chr1 2460184 2461684 - HES5 ENSG00000197921.5 2461684 0.84 0.99 68 59896
chr1 2487078 2496821 + TNFRSF14 ENSG00000157873.13 2487078 0.77 0.8 69 85290
chr1 2517930 2522908 + FAM213B ENSG00000157870.10 2517930 0.73 1.0 70 84483
chr1 2522078 2564481 - MMEL1 ENSG00000142606.11 2564481 0.77 1.0 71 37932
Expression level of Genes
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miRNAs possibly regulated by vista80[chr1:2501788-2502413]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results