EnhancerDB
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  3. vista801[chr1:25248726-25249062]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista801[chr1:25248726-25249062]
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Tissue distribution of vista801
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Transcription factor that possibly regulate vista801[chr1:25248726-25249062]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25248760 25248767 E2F1 TRANSFAC yes 27545076
chr1 25248760 25248767 E2F1 TRANSFAC yes 118251972
chr1 25248787 25248798 HOXC11 JASPAR yes 27545077
chr1 25248787 25248798 HOXC12 JASPAR yes 27545078
chr1 25248787 25248798 HOXD12 JASPAR yes 27545079
chr1 25248787 25248798 HOXC11 JASPAR yes 118251973
chr1 25248787 25248798 HOXC12 JASPAR yes 118251974
chr1 25248787 25248798 HOXD12 JASPAR yes 118251975
chr1 25248788 25248798 HOXC10 JASPAR yes 27545080
chr1 25248788 25248798 HOXD11 JASPAR yes 27545081
chr1 25248788 25248798 HOXC10 JASPAR yes 118251976
chr1 25248788 25248798 HOXD11 JASPAR yes 118251977
chr1 25248799 25248808 ZEB1 JASPAR yes 27545082
chr1 25248799 25248808 ZEB1 JASPAR yes 118251978
chr1 25248800 25248810 FIGLA JASPAR yes 27545083
chr1 25248800 25248810 ID4 JASPAR yes 27545084
chr1 25248800 25248810 TCF3 JASPAR yes 27545085
chr1 25248800 25248810 TCF4 JASPAR yes 27545086
chr1 25248800 25248810 FIGLA JASPAR yes 118251979
chr1 25248800 25248810 ID4 JASPAR yes 118251980
chr1 25248800 25248810 TCF3 JASPAR yes 118251981
chr1 25248800 25248810 TCF4 JASPAR yes 118251982
chr1 25248802 25248807 USF2 TRANSFAC yes 27545087
chr1 25248802 25248807 USF2 TRANSFAC yes 118251983
chr1 25248813 25248817 YY1 TRANSFAC yes 27545088
chr1 25248813 25248817 YY1 TRANSFAC yes 118251984
chr1 25248819 25248822 MYB TRANSFAC yes 27545089
chr1 25248819 25248822 MYB TRANSFAC yes 118251985
chr1 25248866 25248881 SOX21 JASPAR yes 27545090
chr1 25248866 25248881 SOX21 JASPAR yes 118251986
chr1 25248870 25248886 SOX4 JASPAR yes 27545091
chr1 25248870 25248886 SOX4 JASPAR yes 118251987
chr1 25248871 25248886 SOX21 JASPAR yes 27545092
chr1 25248871 25248886 SOX21 JASPAR yes 118251988
chr1 25248877 25248894 RXRA JASPAR yes 27545093
chr1 25248877 25248894 RXRA JASPAR yes 118251989
chr1 25248888 25248891 MYB TRANSFAC yes 27545094
chr1 25248888 25248891 MYB TRANSFAC yes 118251990
chr1 25248895 25248898 MYB TRANSFAC yes 27545095
chr1 25248895 25248898 MYB TRANSFAC yes 118251991
chr1 25248937 25248952 RUNX2 JASPAR yes 27545096
chr1 25248937 25248952 RUNX2 JASPAR yes 118251992
chr1 25248938 25248947 RUNX2 JASPAR yes 27545097
chr1 25248938 25248947 RUNX2 JASPAR yes 118251993
chr1 25248938 25248948 RUNX3 JASPAR yes 27545098
chr1 25248938 25248948 RUNX3 JASPAR yes 118251994
chr1 25248938 25248949 RUNX1 JASPAR yes 27545099
chr1 25248938 25248949 RUNX1 JASPAR yes 118251995
chr1 25248964 25248977 NR2F1 JASPAR yes 27545100
chr1 25248964 25248977 NR2F1 JASPAR yes 118251996
chr1 25248966 25248977 ESRRA JASPAR yes 27545101
chr1 25248966 25248977 ESRRB JASPAR yes 27545102
chr1 25248966 25248977 ESRRA JASPAR yes 118251997
chr1 25248966 25248977 ESRRB JASPAR yes 118251998
chr1 25248967 25248975 NR4A2 JASPAR yes 27545103
chr1 25248967 25248975 NR4A2 JASPAR yes 118251999
chr1 25248968 25248978 RORA JASPAR yes 27545104
chr1 25248968 25248978 RORA JASPAR yes 118252000
chr1 25248984 25248992 CREB1 JASPAR yes 27545105
chr1 25248984 25248992 CREB1 JASPAR yes 118252001
chr1 25248986 25248991 ATF1 TRANSFAC yes 27545106
chr1 25248986 25248991 ATF1 TRANSFAC yes 118252002
chr1 25248995 25249002 NKX3-1 JASPAR yes 27545107
chr1 25248995 25249002 NKX3-1 JASPAR yes 118252003
chr1 25248995 25249006 FOXB1 JASPAR yes 27545108
chr1 25248995 25249006 FOXB1 JASPAR yes 118252004
chr1 25249009 25249013 YY1 TRANSFAC yes 27545109
chr1 25249009 25249013 YY1 TRANSFAC yes 118252005
chr1 25249014 25249019 MYC TRANSFAC yes 27545110
chr1 25249014 25249019 MYC TRANSFAC yes 118252006
chr1 25249043 25249055 POU3F1 JASPAR yes 27545111
chr1 25249043 25249055 POU3F2 JASPAR yes 27545112
chr1 25249043 25249055 POU3F1 JASPAR yes 118252007
chr1 25249043 25249055 POU3F2 JASPAR yes 118252008
chr1 25249044 25249053 POU3F4 JASPAR yes 27545113
chr1 25249044 25249053 POU3F4 JASPAR yes 118252009
chr1 25249050 25249061 TBX20 JASPAR yes 27545114
chr1 25249050 25249061 TBX20 JASPAR yes 118252010
chr1 25249055 25249069 TCF7L2 JASPAR yes 27545115
chr1 25249055 25249069 TCF7L2 JASPAR yes 118252011
SNP sites on vista801[chr1:25248726-25249062]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25248806 rs183269430 C T
FIGLA ID4 TCF3 TCF4 USF2 ZEB1
169443
chr1 25248833 rs143854736 T C no 169444
chr1 25248930 rs545648484 G A no 169445
chr1 25249059 rs549460239 C G
TBX20 TCF7L2
169446
Genes possibly regulated by vista801[chr1:25248726-25249062]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 57450
Expression level of Genes
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miRNAs possibly regulated by vista801[chr1:25248726-25249062]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 25245836 25245856 - hsa-miR-6731-3p MIMAT0027364 25256766 0.000254000508001016 0.0 0.0 23
Expression level of miRNAs
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