EnhancerDB
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  3. vista817[chr1:25352180-25352335]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista817[chr1:25352180-25352335]
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Tissue distribution of vista817
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Transcription factor that possibly regulate vista817[chr1:25352180-25352335]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25352204 25352215 NFE2L2 JASPAR yes 27555098
chr1 25352204 25352215 NFE2L2 JASPAR yes 118252742
chr1 25352213 25352224 ESRRA JASPAR yes 27555099
chr1 25352213 25352224 ESRRB JASPAR yes 27555100
chr1 25352213 25352224 ESRRA JASPAR yes 118252743
chr1 25352213 25352224 ESRRB JASPAR yes 118252744
chr1 25352213 25352226 NR2F1 JASPAR yes 27555101
chr1 25352213 25352226 NR2F1 JASPAR yes 118252745
chr1 25352217 25352221 ESR1 TRANSFAC yes 27555102
chr1 25352217 25352221 ESR1 TRANSFAC yes 118252746
chr1 25352229 25352244 ZIC3 JASPAR yes 27555103
chr1 25352229 25352244 ZIC4 JASPAR yes 27555104
chr1 25352229 25352244 ZIC3 JASPAR yes 118252747
chr1 25352229 25352244 ZIC4 JASPAR yes 118252748
chr1 25352230 25352244 GLIS3 JASPAR yes 27555105
chr1 25352230 25352244 ZIC1 JASPAR yes 27555106
chr1 25352230 25352244 GLIS3 JASPAR yes 118252749
chr1 25352230 25352244 ZIC1 JASPAR yes 118252750
chr1 25352233 25352253 RREB1 JASPAR yes 27555107
chr1 25352233 25352253 RREB1 JASPAR yes 118252751
chr1 25352243 25352248 TFAP2A TRANSFAC yes 27555108
chr1 25352243 25352248 TFAP2A TRANSFAC yes 118252752
chr1 25352243 25352249 MZF1 JASPAR yes 27555109
chr1 25352243 25352249 MZF1 JASPAR yes 118252753
chr1 25352245 25352250 ETS2 TRANSFAC yes 27555110
chr1 25352245 25352250 ETS2 TRANSFAC yes 118252754
chr1 25352265 25352275 SP1 JASPAR yes 27555111
chr1 25352265 25352275 SP1 JASPAR yes 118252755
chr1 25352266 25352275 SP1 TRANSFAC yes 27555112
chr1 25352266 25352275 SP1 TRANSFAC yes 118252756
chr1 25352267 25352272 SP1 TRANSFAC yes 27555113
chr1 25352267 25352272 SP1 TRANSFAC yes 118252757
chr1 25352268 25352273 SP1 TRANSFAC yes 27555114
chr1 25352268 25352273 SP1 TRANSFAC yes 118252758
chr1 25352268 25352274 SP1 TRANSFAC yes 27555115
chr1 25352268 25352274 SP1 TRANSFAC yes 118252759
chr1 25352272 25352276 LFA1 TRANSFAC yes 27555116
chr1 25352272 25352276 LFA1 TRANSFAC yes 118252760
chr1 25352283 25352303 TP53 JASPAR yes 27555117
chr1 25352283 25352303 TP53 JASPAR yes 118252761
chr1 25352299 25352304 TFAP2A TRANSFAC yes 27555118
chr1 25352299 25352304 TFAP2A TRANSFAC yes 118252762
chr1 25352299 25352305 MZF1 JASPAR yes 27555119
chr1 25352299 25352305 MZF1 JASPAR yes 118252763
chr1 25352301 25352306 ETS2 TRANSFAC yes 27555120
chr1 25352301 25352306 ETS2 TRANSFAC yes 118252764
chr1 25352316 25352328 NHLH1 JASPAR yes 27555121
chr1 25352316 25352328 NHLH1 JASPAR yes 118252765
SNP sites on vista817[chr1:25352180-25352335]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25352186 rs189844923 T G no 170561
chr1 25352227 rs149591072 G A no 170562
Genes possibly regulated by vista817[chr1:25352180-25352335]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 39432
Expression level of Genes
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miRNAs possibly regulated by vista817[chr1:25352180-25352335]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results