EnhancerDB
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  3. vista820[chr1:25354376-25354504]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista820[chr1:25354376-25354504]
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Tissue distribution of vista820
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Transcription factor that possibly regulate vista820[chr1:25354376-25354504]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25354372 25354386 TCF7L2 JASPAR yes 27555416
chr1 25354372 25354386 TCF7L2 JASPAR yes 118252870
chr1 25354372 25354387 LEF1 JASPAR yes 27555417
chr1 25354372 25354387 LEF1 JASPAR yes 118252871
chr1 25354376 25354382 TCF4 TRANSFAC yes 27555418
chr1 25354376 25354382 TCF4 TRANSFAC yes 118252872
chr1 25354388 25354392 YY1 TRANSFAC yes 27555419
chr1 25354388 25354392 YY1 TRANSFAC yes 118252873
chr1 25354396 25354411 HSF1 JASPAR yes 27555420
chr1 25354396 25354411 HSF1 JASPAR yes 118252874
chr1 25354397 25354410 HSF4 JASPAR yes 27555421
chr1 25354397 25354410 HSF4 JASPAR yes 118252875
chr1 25354415 25354426 NFE2L2 JASPAR yes 27555422
chr1 25354415 25354426 NFE2L2 JASPAR yes 118252876
chr1 25354446 25354451 MYC TRANSFAC yes 27555423
chr1 25354446 25354451 MYC TRANSFAC yes 118252877
chr1 25354449 25354460 JUND JASPAR yes 27555424
chr1 25354449 25354460 JUND JASPAR yes 118252878
chr1 25354449 25354470 ZNF263 JASPAR yes 27555425
chr1 25354449 25354470 ZNF263 JASPAR yes 118252879
chr1 25354450 25354464 JUN JASPAR yes 27555426
chr1 25354450 25354464 JUN JASPAR yes 118252880
chr1 25354455 25354470 PRDM1 JASPAR yes 27555427
chr1 25354455 25354470 PRDM1 JASPAR yes 118252881
chr1 25354469 25354480 EBF1 JASPAR yes 27555428
chr1 25354469 25354480 EBF1 JASPAR yes 118252882
chr1 25354504 25354525 ZNF263 JASPAR yes 27555429
chr1 25354504 25354525 ZNF263 JASPAR yes 118252883
SNP sites on vista820[chr1:25354376-25354504]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25354454 rs12741481 A G
JUN JUND ZNF263
170589
chr1 25354481 rs115026901 G A no 170590
chr1 25354495 rs75994240 C T no 170591
Genes possibly regulated by vista820[chr1:25354376-25354504]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 37236
Expression level of Genes
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miRNAs possibly regulated by vista820[chr1:25354376-25354504]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results