EnhancerDB
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  3. vista8239[chr10:90600778-90601250]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista8239[chr10:90600778-90601250]
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Tissue distribution of vista8239
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Transcription factor that possibly regulate vista8239[chr10:90600778-90601250]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 90600764 90600778 SPIC JASPAR yes 21130053
chr10 90600764 90600778 SPIC JASPAR yes 128967822
chr10 90600766 90600787 IRF1 JASPAR yes 21130054
chr10 90600766 90600787 IRF1 JASPAR yes 128967823
chr10 90600784 90600788 LFA1 TRANSFAC yes 21130055
chr10 90600784 90600788 LFA1 TRANSFAC yes 128967824
chr10 90600784 90600799 AR JASPAR yes 21130056
chr10 90600784 90600799 AR JASPAR yes 128967825
chr10 90600784 90600801 NR3C1 JASPAR yes 21130057
chr10 90600784 90600801 NR3C2 JASPAR yes 21130058
chr10 90600784 90600801 NR3C1 JASPAR yes 128967826
chr10 90600784 90600801 NR3C2 JASPAR yes 128967827
chr10 90600789 90600803 ONECUT1 JASPAR yes 21130059
chr10 90600789 90600803 ONECUT2 JASPAR yes 21130060
chr10 90600789 90600803 ONECUT3 JASPAR yes 21130061
chr10 90600789 90600803 ONECUT1 JASPAR yes 128967828
chr10 90600789 90600803 ONECUT2 JASPAR yes 128967829
chr10 90600789 90600803 ONECUT3 JASPAR yes 128967830
chr10 90600790 90600801 FOXC1 JASPAR yes 21130062
chr10 90600790 90600801 FOXC1 JASPAR yes 128967831
chr10 90600815 90600820 GATA2 JASPAR yes 21130063
chr10 90600815 90600820 GATA2 JASPAR yes 128967832
chr10 90600834 90600849 AR JASPAR yes 21130064
chr10 90600834 90600849 AR JASPAR yes 128967833
chr10 90600851 90600856 ETS2 TRANSFAC yes 21130065
chr10 90600851 90600856 ETS2 TRANSFAC yes 128967834
chr10 90600853 90600868 STAT1 JASPAR yes 21130066
chr10 90600853 90600868 STAT1 JASPAR yes 128967835
chr10 90600855 90600866 STAT1 JASPAR yes 21130067
chr10 90600855 90600866 STAT3 JASPAR yes 21130068
chr10 90600855 90600866 STAT1 JASPAR yes 128967836
chr10 90600855 90600866 STAT3 JASPAR yes 128967837
chr10 90600858 90600865 ETS1 TRANSFAC yes 21130069
chr10 90600858 90600865 ETS1 TRANSFAC yes 128967838
chr10 90600867 90600873 TBP TRANSFAC yes 21130070
chr10 90600867 90600873 TBP TRANSFAC yes 128967839
chr10 90600875 90600889 PLAG1 JASPAR yes 21130071
chr10 90600875 90600889 PLAG1 JASPAR yes 128967840
chr10 90600909 90600923 NR2F1 JASPAR yes 21130072
chr10 90600909 90600923 NR2F1 JASPAR yes 128967841
chr10 90600911 90600924 JUN JASPAR yes 21130073
chr10 90600911 90600924 JUN JASPAR yes 128967842
chr10 90600914 90600927 NR2F1 JASPAR yes 21130074
chr10 90600914 90600927 NR2F1 JASPAR yes 128967843
chr10 90600915 90600923 CREB1 JASPAR yes 21130075
chr10 90600915 90600923 CREB1 JASPAR yes 128967844
chr10 90600915 90600933 ESR2 JASPAR yes 21130076
chr10 90600915 90600933 ESR2 JASPAR yes 128967845
chr10 90600916 90600934 RARA JASPAR yes 21130077
chr10 90600916 90600934 RARA JASPAR yes 128967846
chr10 90600917 90600932 ESR2 JASPAR yes 21130078
chr10 90600917 90600932 ESR2 JASPAR yes 128967847
chr10 90600917 90600937 ESR1 JASPAR yes 21130079
chr10 90600917 90600937 ESR1 JASPAR yes 128967848
chr10 90600918 90600922 ESR1 TRANSFAC yes 21130080
chr10 90600918 90600922 ESR1 TRANSFAC yes 128967849
chr10 90600934 90600948 SPI1 JASPAR yes 21130081
chr10 90600934 90600948 SPI1 JASPAR yes 128967850
chr10 90600961 90600982 ZNF263 JASPAR yes 21130082
chr10 90600961 90600982 ZNF263 JASPAR yes 128967851
chr10 90600969 90600990 ZNF263 JASPAR yes 21130083
chr10 90600969 90600990 ZNF263 JASPAR yes 128967852
chr10 90600972 90600985 ELF1 JASPAR yes 21130084
chr10 90600972 90600985 ELF1 JASPAR yes 128967853
chr10 90600975 90600981 PEA3 TRANSFAC yes 21130085
chr10 90600975 90600981 PEA3 TRANSFAC yes 128967854
chr10 90600995 90601006 STAT3 JASPAR yes 21130086
chr10 90600995 90601006 STAT3 JASPAR yes 128967855
chr10 90601001 90601013 YY1 JASPAR yes 21130087
chr10 90601001 90601013 YY1 JASPAR yes 128967856
chr10 90601092 90601102 HMBOX1 JASPAR yes 21130088
chr10 90601092 90601102 HMBOX1 JASPAR yes 128967857
chr10 90601092 90601106 RORA JASPAR yes 21130089
chr10 90601092 90601106 RORA JASPAR yes 128967858
chr10 90601094 90601097 MYB TRANSFAC yes 21130090
chr10 90601094 90601097 MYB TRANSFAC yes 128967859
chr10 90601102 90601105 MYB TRANSFAC yes 21130091
chr10 90601102 90601105 MYB TRANSFAC yes 128967860
chr10 90601119 90601140 ZNF263 JASPAR yes 21130092
chr10 90601119 90601140 ZNF263 JASPAR yes 128967861
chr10 90601123 90601144 ZNF263 JASPAR yes 21130093
chr10 90601123 90601144 ZNF263 JASPAR yes 128967862
chr10 90601126 90601147 ZNF263 JASPAR yes 21130094
chr10 90601126 90601147 ZNF263 JASPAR yes 128967863
chr10 90601130 90601145 FOXP1 JASPAR yes 21130095
chr10 90601130 90601145 FOXP1 JASPAR yes 128967864
chr10 90601130 90601151 IRF1 JASPAR yes 21130096
chr10 90601130 90601151 IRF1 JASPAR yes 128967865
chr10 90601131 90601146 FOXP1 JASPAR yes 21130097
chr10 90601131 90601146 FOXP1 JASPAR yes 128967866
chr10 90601134 90601149 STAT2 JASPAR yes 21130098
chr10 90601134 90601149 STAT2 JASPAR yes 128967867
chr10 90601134 90601155 IRF1 JASPAR yes 21130099
chr10 90601134 90601155 IRF1 JASPAR yes 128967868
chr10 90601135 90601150 FOXP1 JASPAR yes 21130100
chr10 90601135 90601150 FOXP1 JASPAR yes 128967869
chr10 90601138 90601152 SPIC JASPAR yes 21130101
chr10 90601138 90601152 STAT1 JASPAR yes 21130102
chr10 90601138 90601152 SPIC JASPAR yes 128967870
chr10 90601138 90601152 STAT1 JASPAR yes 128967871
chr10 90601138 90601153 PRDM1 JASPAR yes 21130103
chr10 90601138 90601153 STAT2 JASPAR yes 21130104
chr10 90601138 90601153 PRDM1 JASPAR yes 128967872
chr10 90601138 90601153 STAT2 JASPAR yes 128967873
chr10 90601138 90601159 IRF1 JASPAR yes 21130105
chr10 90601138 90601159 IRF1 JASPAR yes 128967874
chr10 90601159 90601165 SOX10 JASPAR yes 21130106
chr10 90601159 90601165 SOX10 JASPAR yes 128967875
chr10 90601159 90601171 GLI2 JASPAR yes 21130107
chr10 90601159 90601171 GLI2 JASPAR yes 128967876
chr10 90601160 90601170 RUNX3 JASPAR yes 21130108
chr10 90601160 90601170 RUNX3 JASPAR yes 128967877
chr10 90601161 90601170 RUNX2 JASPAR yes 21130109
chr10 90601161 90601170 RUNX2 JASPAR yes 128967878
chr10 90601172 90601190 NFYA JASPAR yes 21130110
chr10 90601172 90601190 NFYA JASPAR yes 128967879
chr10 90601175 90601179 YY1 TRANSFAC yes 21130111
chr10 90601175 90601179 YY1 TRANSFAC yes 128967880
chr10 90601181 90601193 HLF JASPAR yes 21130112
chr10 90601181 90601193 HLF JASPAR yes 128967881
chr10 90601188 90601191 MYB TRANSFAC yes 21130113
chr10 90601188 90601191 MYB TRANSFAC yes 128967882
chr10 90601195 90601203 TBX15 JASPAR yes 21130114
chr10 90601195 90601203 TBX15 JASPAR yes 128967883
chr10 90601195 90601204 ZEB1 JASPAR yes 21130115
chr10 90601195 90601204 ZEB1 JASPAR yes 128967884
chr10 90601196 90601206 TCF4 JASPAR yes 21130116
chr10 90601196 90601206 TCF4 JASPAR yes 128967885
chr10 90601198 90601203 USF2 TRANSFAC yes 21130117
chr10 90601198 90601203 USF2 TRANSFAC yes 128967886
chr10 90601219 90601234 PRDM1 JASPAR yes 21130118
chr10 90601219 90601234 PRDM1 JASPAR yes 128967887
SNP sites on vista8239[chr10:90600778-90601250]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 90600795 rs115757518 T C
AR FOXC1 NR3C1 NR3C2 ONECUT1 ONECUT2 ONECUT3
1563921
chr10 90600810 rs141643702 A C no 1563922
chr10 90600827 rs112952619 G A no 1563923
chr10 90600865 rs1214558 A G
ETS1 STAT1 STAT3
1563924
chr10 90600866 rs75851327 G A
STAT1 STAT3
1563925
chr10 90600940 rs533726537 G T
SPI1
1563926
chr10 90600967 rs138738083 A C
ZNF263
1563927
chr10 90600997 rs141870804 T C
STAT3
1563928
chr10 90601188 rs80336990 G T
HLF MYB NFYA
1563929
Genes possibly regulated by vista8239[chr10:90600778-90601250]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 90521163 90537999 + LIPN ENSG00000204020.5 90521163 0.94 0.0 9999 20385
chr10 90562487 90580303 + LIPM ENSG00000173239.9 90562487 0.96 1.0 10000 61709
chr10 90581889 90611575 - ANKRD22 ENSG00000152766.5 90611575 0.96 1.0 10001 89675
chr10 90639491 90734910 + STAMBPL1 ENSG00000138134.7 90639491 0.81 0.99 10002 61759
Expression level of Genes
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miRNAs possibly regulated by vista8239[chr10:90600778-90601250]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results