EnhancerDB
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  3. vista826[chr1:25361269-25361784]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista826[chr1:25361269-25361784]
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Tissue distribution of vista826
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Transcription factor that possibly regulate vista826[chr1:25361269-25361784]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802494
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802495
chr1 25361276 25361289 ELF1 JASPAR yes 27556423
chr1 25361276 25361289 ELF1 JASPAR yes 118253302
chr1 25361279 25361289 GABPA JASPAR yes 27556424
chr1 25361279 25361289 GABPA JASPAR yes 118253303
chr1 25361279 25361290 FLI1 JASPAR yes 27556425
chr1 25361279 25361290 FLI1 JASPAR yes 118253304
chr1 25361280 25361288 EHF JASPAR yes 27556426
chr1 25361280 25361288 EHF JASPAR yes 118253305
chr1 25361333 25361354 ZNF263 JASPAR yes 27556427
chr1 25361333 25361354 ZNF263 JASPAR yes 118253306
chr1 25361336 25361342 TCF4 TRANSFAC yes 27556428
chr1 25361336 25361342 TCF4 TRANSFAC yes 118253307
chr1 25361341 25361347 NFE2 TRANSFAC yes 27556429
chr1 25361341 25361347 NFE2 TRANSFAC yes 118253308
chr1 25361342 25361359 RARA JASPAR yes 27556430
chr1 25361342 25361359 RXRA JASPAR yes 27556431
chr1 25361342 25361359 RARA JASPAR yes 118253309
chr1 25361342 25361359 RXRA JASPAR yes 118253310
chr1 25361344 25361350 SP1 TRANSFAC yes 27556432
chr1 25361344 25361350 SP1 TRANSFAC yes 118253311
chr1 25361344 25361354 SP1 JASPAR yes 27556433
chr1 25361344 25361354 SP1 JASPAR yes 118253312
chr1 25361375 25361388 SMAD2 JASPAR yes 27556434
chr1 25361375 25361388 SMAD2 JASPAR yes 118253313
chr1 25361413 25361434 ZNF263 JASPAR yes 27556435
chr1 25361413 25361434 ZNF263 JASPAR yes 118253314
chr1 25361421 25361431 SP1 JASPAR yes 27556436
chr1 25361421 25361431 SP1 JASPAR yes 118253315
chr1 25361424 25361443 CTCF JASPAR yes 27556437
chr1 25361424 25361443 CTCF JASPAR yes 118253316
chr1 25361427 25361437 ZNF740 JASPAR yes 27556438
chr1 25361427 25361437 ZNF740 JASPAR yes 118253317
chr1 25361429 25361445 NFYA JASPAR yes 27556439
chr1 25361429 25361445 NFYA JASPAR yes 118253318
chr1 25361435 25361445 SREBF1 JASPAR yes 27556440
chr1 25361435 25361445 SREBF1 JASPAR yes 118253319
chr1 25361436 25361451 NR2C2 JASPAR yes 27556441
chr1 25361436 25361451 NR2C2 JASPAR yes 118253320
chr1 25361437 25361451 RXRB JASPAR yes 27556442
chr1 25361437 25361451 RXRG JASPAR yes 27556443
chr1 25361437 25361451 RXRB JASPAR yes 118253321
chr1 25361437 25361451 RXRG JASPAR yes 118253322
chr1 25361460 25361465 ETS2 TRANSFAC yes 27556444
chr1 25361460 25361465 ETS2 TRANSFAC yes 118253323
chr1 25361472 25361483 FOS JASPAR yes 27556445
chr1 25361472 25361483 FOSL1 JASPAR yes 27556446
chr1 25361472 25361483 JUND JASPAR yes 27556447
chr1 25361472 25361483 FOS JASPAR yes 118253324
chr1 25361472 25361483 FOSL1 JASPAR yes 118253325
chr1 25361472 25361483 JUND JASPAR yes 118253326
chr1 25361473 25361484 FOSL2 JASPAR yes 27556448
chr1 25361473 25361484 JUNB JASPAR yes 27556449
chr1 25361473 25361484 FOSL2 JASPAR yes 118253327
chr1 25361473 25361484 JUNB JASPAR yes 118253328
chr1 25361506 25361517 TBX20 JASPAR yes 27556450
chr1 25361506 25361517 TBX20 JASPAR yes 118253329
chr1 25361523 25361537 CREB3L1 JASPAR yes 27556451
chr1 25361523 25361537 CREB3L1 JASPAR yes 118253330
chr1 25361631 25361637 SOX10 JASPAR yes 27556452
chr1 25361631 25361637 SOX10 JASPAR yes 118253331
chr1 25361650 25361662 INSM1 JASPAR yes 27556453
chr1 25361650 25361662 INSM1 JASPAR yes 118253332
chr1 25361658 25361668 SP1 JASPAR yes 27556454
chr1 25361658 25361668 SP1 JASPAR yes 118253333
chr1 25361663 25361673 SP1 JASPAR yes 27556455
chr1 25361663 25361673 SP1 JASPAR yes 118253334
chr1 25361664 25361673 SP1 TRANSFAC yes 27556456
chr1 25361664 25361673 SP1 TRANSFAC yes 118253335
chr1 25361665 25361670 SP1 TRANSFAC yes 27556457
chr1 25361665 25361670 SP1 TRANSFAC yes 118253336
chr1 25361666 25361671 SP1 TRANSFAC yes 27556458
chr1 25361666 25361671 SP1 TRANSFAC yes 118253337
chr1 25361666 25361672 SP1 TRANSFAC yes 27556459
chr1 25361666 25361672 SP1 TRANSFAC yes 118253338
chr1 25361669 25361674 SP1 TRANSFAC yes 27556460
chr1 25361669 25361674 SP1 TRANSFAC yes 118253339
chr1 25361672 25361681 TFAP2A JASPAR yes 27556461
chr1 25361672 25361681 TFAP2A JASPAR yes 118253340
chr1 25361696 25361709 ELF1 JASPAR yes 27556462
chr1 25361696 25361709 ELF1 JASPAR yes 118253341
chr1 25361709 25361719 NFIA JASPAR yes 27556463
chr1 25361709 25361719 NFIA JASPAR yes 118253342
chr1 25361710 25361719 NFIX JASPAR yes 27556464
chr1 25361710 25361719 NFIX JASPAR yes 118253343
chr1 25361711 25361717 NFIC JASPAR yes 27556465
chr1 25361711 25361717 NFIC JASPAR yes 118253344
chr1 25361752 25361771 CTCF JASPAR yes 27556466
chr1 25361752 25361771 CTCF JASPAR yes 118253345
chr1 25361758 25361770 YY1 JASPAR yes 27556467
chr1 25361758 25361770 YY1 JASPAR yes 118253346
chr1 25361761 25361767 YY1 JASPAR yes 27556468
chr1 25361761 25361767 YY1 JASPAR yes 118253347
chr1 25361767 25361788 ZNF263 JASPAR yes 27556469
chr1 25361767 25361788 ZNF263 JASPAR yes 118253348
SNP sites on vista826[chr1:25361269-25361784]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25361272 rs76938319 T A,C
POLR2A
170674
chr1 25361409 rs568287088 T C
POLR2A
170675
chr1 25361434 rs191158091 C A,G
CTCF NFYA POLR2A ZNF263 ZNF740
170676
chr1 25361581 rs544796184 C T
POLR2A
170677
chr1 25361605 rs115751136 C T
POLR2A
170678
chr1 25361631 rs140505226 C T
POLR2A SOX10
170679
chr1 25361724 rs11806639 C T no 170680
chr1 25361777 rs11807607 A G
ZNF263
170681
Genes possibly regulated by vista826[chr1:25361269-25361784]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 30343
Expression level of Genes
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miRNAs possibly regulated by vista826[chr1:25361269-25361784]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results