EnhancerDB
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  3. vista827[chr1:25425738-25426059]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista827[chr1:25425738-25426059]
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Tissue distribution of vista827
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Transcription factor that possibly regulate vista827[chr1:25425738-25426059]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25425733 25425738 ETS2 TRANSFAC yes 27561896
chr1 25425733 25425738 ETS2 TRANSFAC yes 118253349
chr1 25425749 25425764 FOXP1 JASPAR yes 27561897
chr1 25425749 25425764 FOXP1 JASPAR yes 118253350
chr1 25425752 25425763 FOXP2 JASPAR yes 27561898
chr1 25425752 25425763 FOXP2 JASPAR yes 118253351
chr1 25425754 25425763 SRY JASPAR yes 27561899
chr1 25425754 25425763 SRY JASPAR yes 118253352
chr1 25425755 25425775 RREB1 JASPAR yes 27561900
chr1 25425755 25425775 RREB1 JASPAR yes 118253353
chr1 25425820 25425841 ZNF263 JASPAR yes 27561901
chr1 25425820 25425841 ZNF263 JASPAR yes 118253354
chr1 25425828 25425847 CTCF JASPAR yes 27561902
chr1 25425828 25425847 CTCF JASPAR yes 118253355
chr1 25425830 25425834 NFE TRANSFAC yes 27561903
chr1 25425830 25425834 NFE TRANSFAC yes 118253356
chr1 25425852 25425866 SPI1 JASPAR yes 27561904
chr1 25425852 25425866 SPIC JASPAR yes 27561905
chr1 25425852 25425866 SPI1 JASPAR yes 118253357
chr1 25425852 25425866 SPIC JASPAR yes 118253358
chr1 25425859 25425870 NRL JASPAR yes 27561906
chr1 25425859 25425870 NRL JASPAR yes 118253359
chr1 25425860 25425866 TCF4 TRANSFAC yes 27561907
chr1 25425860 25425866 TCF4 TRANSFAC yes 118253360
chr1 25425931 25425946 FOXA1 JASPAR yes 27561908
chr1 25425931 25425946 FOXA1 JASPAR yes 118253361
chr1 25425934 25425945 FOXB1 JASPAR yes 27561909
chr1 25425934 25425945 FOXB1 JASPAR yes 118253362
chr1 25425935 25425946 FOXA1 JASPAR yes 27561910
chr1 25425935 25425946 FOXA1 JASPAR yes 118253363
chr1 25425946 25425967 ZNF263 JASPAR yes 27561911
chr1 25425946 25425967 ZNF263 JASPAR yes 118253364
chr1 25425948 25425958 FIGLA JASPAR yes 27561912
chr1 25425948 25425958 MSC JASPAR yes 27561913
chr1 25425948 25425958 TCF3 JASPAR yes 27561914
chr1 25425948 25425958 FIGLA JASPAR yes 118253365
chr1 25425948 25425958 MSC JASPAR yes 118253366
chr1 25425948 25425958 TCF3 JASPAR yes 118253367
chr1 25425949 25425958 SNAI2 JASPAR yes 27561915
chr1 25425949 25425958 SNAI2 JASPAR yes 118253368
chr1 25425950 25425955 USF2 TRANSFAC yes 27561916
chr1 25425950 25425955 USF2 TRANSFAC yes 118253369
chr1 25425953 25425964 ELK4 JASPAR yes 27561917
chr1 25425953 25425964 FLI1 JASPAR yes 27561918
chr1 25425953 25425964 ELK4 JASPAR yes 118253370
chr1 25425953 25425964 FLI1 JASPAR yes 118253371
chr1 25425953 25425966 ELF3 JASPAR yes 27561919
chr1 25425953 25425966 ELF3 JASPAR yes 118253372
chr1 25425954 25425965 ELF5 JASPAR yes 27561920
chr1 25425954 25425965 ELF5 JASPAR yes 118253373
chr1 25425954 25425967 ELF1 JASPAR yes 27561921
chr1 25425954 25425967 ELF1 JASPAR yes 118253374
chr1 25425980 25426001 ZNF263 JASPAR yes 27561922
chr1 25425980 25426001 ZNF263 JASPAR yes 118253375
chr1 25425982 25425988 MAZ TRANSFAC yes 27561923
chr1 25425982 25425988 MAZ TRANSFAC yes 118253376
chr1 25425991 25426001 MZF1 JASPAR yes 27561924
chr1 25425991 25426001 MZF1 JASPAR yes 118253377
chr1 25425994 25425999 TFAP2A TRANSFAC yes 27561925
chr1 25425994 25425999 TFAP2A TRANSFAC yes 118253378
chr1 25425994 25426000 MZF1 JASPAR yes 27561926
chr1 25425994 25426000 MZF1 JASPAR yes 118253379
chr1 25425996 25426001 ETS2 TRANSFAC yes 27561927
chr1 25425996 25426001 ETS2 TRANSFAC yes 118253380
chr1 25426011 25426015 H4TF2 TRANSFAC yes 27561928
chr1 25426011 25426015 H4TF2 TRANSFAC yes 118253381
chr1 25426019 25426023 NFE TRANSFAC yes 27561929
chr1 25426019 25426023 NFE TRANSFAC yes 118253382
chr1 25426022 25426036 MTF1 JASPAR yes 27561930
chr1 25426022 25426036 MTF1 JASPAR yes 118253383
chr1 25426034 25426045 ESRRA JASPAR yes 27561931
chr1 25426034 25426045 ESRRA JASPAR yes 118253384
chr1 25426037 25426050 SMAD2 JASPAR yes 27561932
chr1 25426037 25426050 SMAD2 JASPAR yes 118253385
chr1 25426037 25426057 ESR1 JASPAR yes 27561933
chr1 25426037 25426057 ESR1 JASPAR yes 118253386
chr1 25426038 25426042 ESR1 TRANSFAC yes 27561934
chr1 25426038 25426042 ESR1 TRANSFAC yes 118253387
chr1 25426045 25426055 NHLH1 JASPAR yes 27561935
chr1 25426045 25426055 NHLH1 JASPAR yes 118253388
chr1 25426054 25426058 ESR1 TRANSFAC yes 27561936
chr1 25426054 25426058 ESR1 TRANSFAC yes 118253389
SNP sites on vista827[chr1:25425738-25426059]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25425744 rs146560445 G A no 171436
chr1 25425806 rs187251425 G A no 171437
chr1 25425889 rs141294225 G A no 171438
chr1 25425907 rs16830383 C A,T no 171439
Genes possibly regulated by vista827[chr1:25425738-25426059]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista827[chr1:25425738-25426059]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 56227859 56227882 - hsa-miR-216b-3p MIMAT0026721 56241387 0.05158665324792144 0.94842 0.494179 957
Expression level of miRNAs
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