EnhancerDB
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  3. vista832[chr1:25566195-25566411]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista832[chr1:25566195-25566411]
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Tissue distribution of vista832
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Transcription factor that possibly regulate vista832[chr1:25566195-25566411]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25565988 25567560 POLR2A UCSC Txn Factor no Conserved 107802502
chr1 25566194 25566212 ESR2 JASPAR yes 27571453
chr1 25566194 25566212 ESR2 JASPAR yes 118253540
chr1 25566226 25566230 H4TF2 TRANSFAC yes 27571454
chr1 25566226 25566230 H4TF2 TRANSFAC yes 118253541
chr1 25566243 25566247 H1TF2 TRANSFAC yes 27571455
chr1 25566243 25566247 NFE TRANSFAC yes 27571456
chr1 25566243 25566247 SRF TRANSFAC yes 27571457
chr1 25566243 25566247 H1TF2 TRANSFAC yes 118253542
chr1 25566243 25566247 NFE TRANSFAC yes 118253543
chr1 25566243 25566247 SRF TRANSFAC yes 118253544
chr1 25566247 25566258 NRF1 JASPAR yes 27571458
chr1 25566247 25566258 NRF1 JASPAR yes 118253545
chr1 25566248 25566259 NRF1 JASPAR yes 27571459
chr1 25566248 25566259 NRF1 JASPAR yes 118253546
chr1 25566298 25566303 SP1 TRANSFAC yes 27571460
chr1 25566298 25566303 SP1 TRANSFAC yes 118253547
chr1 25566300 25566305 TFAP2A TRANSFAC yes 27571461
chr1 25566300 25566305 TFAP2A TRANSFAC yes 118253548
chr1 25566300 25566306 MZF1 JASPAR yes 27571462
chr1 25566300 25566306 MZF1 JASPAR yes 118253549
chr1 25566313 25566317 H4TF2 TRANSFAC yes 27571463
chr1 25566313 25566317 H4TF2 TRANSFAC yes 118253550
chr1 25566313 25566327 GLIS3 JASPAR yes 27571464
chr1 25566313 25566327 GLIS3 JASPAR yes 118253551
chr1 25566319 25566326 ETS1 TRANSFAC yes 27571465
chr1 25566319 25566326 ETS1 TRANSFAC yes 118253552
chr1 25566320 25566328 EHF JASPAR yes 27571466
chr1 25566320 25566328 EHF JASPAR yes 118253553
chr1 25566329 25566341 CREB1 JASPAR yes 27571467
chr1 25566329 25566341 CREB1 JASPAR yes 118253554
chr1 25566334 25566344 HINFP JASPAR yes 27571468
chr1 25566334 25566344 HINFP JASPAR yes 118253555
chr1 25566341 25566347 ETS1 JASPAR yes 27571469
chr1 25566341 25566347 ETS1 JASPAR yes 118253556
chr1 25566365 25566380 HNF1A JASPAR yes 27571470
chr1 25566365 25566380 HNF1A JASPAR yes 118253557
chr1 25566366 25566376 ESX1 JASPAR yes 27571471
chr1 25566366 25566376 GBX2 JASPAR yes 27571472
chr1 25566366 25566376 RAX JASPAR yes 27571473
chr1 25566366 25566376 ESX1 JASPAR yes 118253558
chr1 25566366 25566376 GBX2 JASPAR yes 118253559
chr1 25566366 25566376 RAX JASPAR yes 118253560
chr1 25566366 25566379 HNF1B JASPAR yes 27571474
chr1 25566366 25566379 HNF1B JASPAR yes 118253561
chr1 25566367 25566375 BARX1 JASPAR yes 27571475
chr1 25566367 25566375 BARX1 JASPAR yes 118253562
chr1 25566367 25566376 VENTX JASPAR yes 27571476
chr1 25566367 25566376 VENTX JASPAR yes 118253563
chr1 25566370 25566379 SRY JASPAR yes 27571477
chr1 25566370 25566379 SRY JASPAR yes 118253564
chr1 25566373 25566384 STAT1 JASPAR yes 27571478
chr1 25566373 25566384 STAT1 JASPAR yes 118253565
chr1 25566373 25566386 ELF1 JASPAR yes 27571479
chr1 25566373 25566386 ELF1 JASPAR yes 118253566
chr1 25566374 25566384 ELK1 JASPAR yes 27571480
chr1 25566374 25566384 ELK1 JASPAR yes 118253567
chr1 25566374 25566386 EHF JASPAR yes 27571481
chr1 25566374 25566386 ELF1 JASPAR yes 27571482
chr1 25566374 25566386 ELF4 JASPAR yes 27571483
chr1 25566374 25566386 EHF JASPAR yes 118253568
chr1 25566374 25566386 ELF1 JASPAR yes 118253569
chr1 25566374 25566386 ELF4 JASPAR yes 118253570
chr1 25566374 25566387 ELF3 JASPAR yes 27571484
chr1 25566374 25566387 ELF3 JASPAR yes 118253571
chr1 25566375 25566386 ELF5 JASPAR yes 27571485
chr1 25566375 25566386 ETV2 JASPAR yes 27571486
chr1 25566375 25566386 SPDEF JASPAR yes 27571487
chr1 25566375 25566386 ELF5 JASPAR yes 118253572
chr1 25566375 25566386 ETV2 JASPAR yes 118253573
chr1 25566375 25566386 SPDEF JASPAR yes 118253574
chr1 25566376 25566385 ELK4 JASPAR yes 27571488
chr1 25566376 25566385 ELK4 JASPAR yes 118253575
chr1 25566376 25566386 ELK1 JASPAR yes 27571489
chr1 25566376 25566386 ELK3 JASPAR yes 27571490
chr1 25566376 25566386 ERF JASPAR yes 27571491
chr1 25566376 25566386 ERG JASPAR yes 27571492
chr1 25566376 25566386 ETS1 JASPAR yes 27571493
chr1 25566376 25566386 ETV1 JASPAR yes 27571494
chr1 25566376 25566386 ETV3 JASPAR yes 27571495
chr1 25566376 25566386 ETV4 JASPAR yes 27571496
chr1 25566376 25566386 ETV5 JASPAR yes 27571497
chr1 25566376 25566386 ETV6 JASPAR yes 27571498
chr1 25566376 25566386 FEV JASPAR yes 27571499
chr1 25566376 25566386 FLI1 JASPAR yes 27571500
chr1 25566376 25566386 GABPA JASPAR yes 27571501
chr1 25566376 25566386 ELK1 JASPAR yes 118253576
chr1 25566376 25566386 ELK3 JASPAR yes 118253577
chr1 25566376 25566386 ERF JASPAR yes 118253578
chr1 25566376 25566386 ERG JASPAR yes 118253579
chr1 25566376 25566386 ETS1 JASPAR yes 118253580
chr1 25566376 25566386 ETV1 JASPAR yes 118253581
chr1 25566376 25566386 ETV3 JASPAR yes 118253582
chr1 25566376 25566386 ETV4 JASPAR yes 118253583
chr1 25566376 25566386 ETV5 JASPAR yes 118253584
chr1 25566376 25566386 ETV6 JASPAR yes 118253585
chr1 25566376 25566386 FEV JASPAR yes 118253586
chr1 25566376 25566386 FLI1 JASPAR yes 118253587
chr1 25566376 25566386 GABPA JASPAR yes 118253588
chr1 25566376 25566387 ELK4 JASPAR yes 27571502
chr1 25566376 25566387 FLI1 JASPAR yes 27571503
chr1 25566376 25566387 ELK4 JASPAR yes 118253589
chr1 25566376 25566387 FLI1 JASPAR yes 118253590
chr1 25566377 25566385 FEV JASPAR yes 27571504
chr1 25566377 25566385 FEV JASPAR yes 118253591
chr1 25566378 25566384 ETS1 JASPAR yes 27571505
chr1 25566378 25566384 SPI1 JASPAR yes 27571506
chr1 25566378 25566384 ETS1 JASPAR yes 118253592
chr1 25566378 25566384 SPI1 JASPAR yes 118253593
chr1 25566384 25566395 E2F6 JASPAR yes 27571507
chr1 25566384 25566395 E2F6 JASPAR yes 118253594
chr1 25566388 25566393 ETS2 TRANSFAC yes 27571508
chr1 25566388 25566393 ETS2 TRANSFAC yes 118253595
chr1 25566390 25566409 RFX2 JASPAR yes 27571509
chr1 25566390 25566409 RFX2 JASPAR yes 118253596
chr1 25566396 25566415 CTCF JASPAR yes 27571510
chr1 25566396 25566415 CTCF JASPAR yes 118253597
chr1 25566403 25566409 MAZ TRANSFAC yes 27571511
chr1 25566403 25566409 MAZ TRANSFAC yes 118253598
chr1 25566406 25566412 SP1 TRANSFAC yes 27571512
chr1 25566406 25566412 SP1 TRANSFAC yes 118253599
chr1 25566407 25566412 SP1 TRANSFAC yes 27571513
chr1 25566407 25566412 SP1 TRANSFAC yes 118253600
SNP sites on vista832[chr1:25566195-25566411]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25566205 rs9438867 T G
ESR2 POLR2A
172469
chr1 25566211 rs186242007 T A
ESR2 POLR2A
172470
chr1 25566297 rs79058410 G A
POLR2A
172471
chr1 25566309 rs12090759 G A
POLR2A
172472
Genes possibly regulated by vista832[chr1:25566195-25566411]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25549170 25558993 - SYF2 ENSG00000117614.5 25558993 0.66 0.99 339 92798
chr1 25568728 25664704 - C1orf63 ENSG00000117616.13 25664704 0.73 0.99 340 1707
chr1 25598884 25656936 + RHD ENSG00000187010.14 25598884 0.9 0.98 341 67527
chr1 25664408 25688852 + TMEM50A ENSG00000183726.6 25664408 0.55 0.99 342 2003
Expression level of Genes
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miRNAs possibly regulated by vista832[chr1:25566195-25566411]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results