EnhancerDB
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  3. vista835[chr1:25802039-25802147]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista835[chr1:25802039-25802147]
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Tissue distribution of vista835
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Transcription factor that possibly regulate vista835[chr1:25802039-25802147]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25802037 25802052 FOXP1 JASPAR yes 27578681
chr1 25802037 25802052 FOXP1 JASPAR yes 118253665
chr1 25802038 25802053 FOXP1 JASPAR yes 27578682
chr1 25802038 25802053 FOXP1 JASPAR yes 118253666
chr1 25802039 25802054 FOXP1 JASPAR yes 27578683
chr1 25802039 25802054 FOXP1 JASPAR yes 118253667
chr1 25802039 25802060 IRF1 JASPAR yes 27578684
chr1 25802039 25802060 IRF1 JASPAR yes 118253668
chr1 25802040 25802055 FOXP1 JASPAR yes 27578685
chr1 25802040 25802055 FOXP1 JASPAR yes 118253669
chr1 25802040 25802061 IRF1 JASPAR yes 27578686
chr1 25802040 25802061 IRF1 JASPAR yes 118253670
chr1 25802041 25802056 FOXP1 JASPAR yes 27578687
chr1 25802041 25802056 FOXP1 JASPAR yes 118253671
chr1 25802041 25802062 IRF1 JASPAR yes 27578688
chr1 25802041 25802062 IRF1 JASPAR yes 118253672
chr1 25802042 25802057 FOXP1 JASPAR yes 27578689
chr1 25802042 25802057 FOXP1 JASPAR yes 118253673
chr1 25802042 25802063 IRF1 JASPAR yes 27578690
chr1 25802042 25802063 IRF1 JASPAR yes 118253674
chr1 25802043 25802058 FOXP1 JASPAR yes 27578691
chr1 25802043 25802058 FOXP1 JASPAR yes 118253675
chr1 25802043 25802064 IRF1 JASPAR yes 27578692
chr1 25802043 25802064 IRF1 JASPAR yes 118253676
chr1 25802044 25802059 FOXP1 JASPAR yes 27578693
chr1 25802044 25802059 FOXP1 JASPAR yes 118253677
chr1 25802044 25802065 IRF1 JASPAR yes 27578694
chr1 25802044 25802065 IRF1 JASPAR yes 118253678
chr1 25802045 25802060 FOXP1 JASPAR yes 27578695
chr1 25802045 25802060 FOXP1 JASPAR yes 118253679
chr1 25802045 25802066 IRF1 JASPAR yes 27578696
chr1 25802045 25802066 IRF1 JASPAR yes 118253680
chr1 25802046 25802061 FOXP1 JASPAR yes 27578697
chr1 25802046 25802061 FOXP1 JASPAR yes 118253681
chr1 25802047 25802062 FOXP1 JASPAR yes 27578698
chr1 25802047 25802062 FOXP1 JASPAR yes 118253682
chr1 25802049 25802070 IRF1 JASPAR yes 27578699
chr1 25802049 25802070 IRF1 JASPAR yes 118253683
chr1 25802050 25802071 IRF1 JASPAR yes 27578700
chr1 25802050 25802071 IRF1 JASPAR yes 118253684
chr1 25802051 25802072 IRF1 JASPAR yes 27578701
chr1 25802051 25802072 IRF1 JASPAR yes 118253685
chr1 25802053 25802067 SPIC JASPAR yes 27578702
chr1 25802053 25802067 SPIC JASPAR yes 118253686
chr1 25802058 25802063 ETS2 TRANSFAC yes 27578703
chr1 25802058 25802063 ETS2 TRANSFAC yes 118253687
chr1 25802079 25802089 RELA JASPAR yes 27578704
chr1 25802079 25802089 REL JASPAR yes 27578705
chr1 25802079 25802089 RELA JASPAR yes 118253688
chr1 25802079 25802089 REL JASPAR yes 118253689
chr1 25802079 25802090 NFKB1 JASPAR yes 27578706
chr1 25802079 25802090 NFKB1 JASPAR yes 118253690
chr1 25802088 25802108 RREB1 JASPAR yes 27578707
chr1 25802088 25802108 RREB1 JASPAR yes 118253691
chr1 25802127 25802131 LFA1 TRANSFAC yes 27578708
chr1 25802127 25802131 LFA1 TRANSFAC yes 118253692
SNP sites on vista835[chr1:25802039-25802147]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25802127 rs115396230 T C
LFA1
173252
Genes possibly regulated by vista835[chr1:25802039-25802147]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25688740 25756683 - RHCE ENSG00000188672.12 25756683 0.78 1.0 343 54644
chr1 25757388 25826700 + TMEM57 ENSG00000204178.5 25757388 0.6 0.99 344 55349
chr1 25870071 25895377 + LDLRAP1 ENSG00000157978.7 25870071 0.85 1.0 345 32076
Expression level of Genes
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miRNAs possibly regulated by vista835[chr1:25802039-25802147]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results