EnhancerDB
  1. Home
  2. Enhancers
  3. vista838[chr1:25942744-25943208]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista838[chr1:25942744-25943208]
Back to top
Tissue distribution of vista838
Back to top
Transcription factor that possibly regulate vista838[chr1:25942744-25943208]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25942744 25942753 TFAP2A JASPAR yes 118253738
chr1 25942748 25942759 NRF1 JASPAR yes 118253739
chr1 25942749 25942753 LFA1 TRANSFAC yes 118253740
chr1 25942753 25942766 TFAP2A JASPAR yes 118253741
chr1 25942753 25942766 TFAP2B JASPAR yes 118253742
chr1 25942753 25942766 TFAP2C JASPAR yes 118253743
chr1 25942775 25942794 RFX2 JASPAR yes 118253744
chr1 25942777 25942792 RFX5 JASPAR yes 118253745
chr1 25942812 25942825 NR2F1 JASPAR yes 118253746
chr1 25942814 25942822 NR4A2 JASPAR yes 118253747
chr1 25942815 25942830 ESR2 JASPAR yes 118253748
chr1 25942816 25942820 ESR1 TRANSFAC yes 118253749
chr1 25942830 25942834 LFA1 TRANSFAC yes 118253750
chr1 25942837 25942843 SP1 TRANSFAC yes 118253751
chr1 25942851 25942856 MYC TRANSFAC yes 118253752
chr1 25942864 25942875 ELK4 JASPAR yes 118253753
chr1 25942864 25942875 FLI1 JASPAR yes 118253754
chr1 25942865 25942875 ELK1 JASPAR yes 118253755
chr1 25942865 25942875 ELK3 JASPAR yes 118253756
chr1 25942865 25942875 ETV3 JASPAR yes 118253757
chr1 25942865 25942875 ETV6 JASPAR yes 118253758
chr1 25942865 25942875 GABPA JASPAR yes 118253759
chr1 25942865 25942877 ELF1 JASPAR yes 118253760
chr1 25942865 25942877 ELF4 JASPAR yes 118253761
chr1 25942865 25942878 ELF1 JASPAR yes 118253762
chr1 25942866 25942875 ELK4 JASPAR yes 118253763
chr1 25942867 25942873 ETS1 JASPAR yes 118253764
chr1 25942867 25942873 SPI1 JASPAR yes 118253765
chr1 25942873 25942878 SP1 TRANSFAC yes 118253766
chr1 25942886 25942901 ZBTB33 JASPAR yes 118253767
chr1 25942888 25942901 TFAP2A JASPAR yes 118253768
chr1 25942888 25942901 TFAP2B JASPAR yes 118253769
chr1 25942888 25942901 TFAP2C JASPAR yes 118253770
chr1 25942894 25942914 RREB1 JASPAR yes 118253771
chr1 25942896 25942901 SP1 TRANSFAC yes 118253772
chr1 25942897 25942902 SP1 TRANSFAC yes 118253773
chr1 25942905 25942915 SP1 JASPAR yes 118253774
chr1 25942906 25942918 ZBTB7C JASPAR yes 118253775
chr1 25942917 25942921 NFE TRANSFAC yes 118253776
chr1 25942928 25942932 H4TF2 TRANSFAC yes 118253777
chr1 25942943 25942947 LFA1 TRANSFAC yes 118253778
chr1 25942945 25942960 NFYB JASPAR yes 118253779
chr1 25942947 25942963 NFYA JASPAR yes 118253780
chr1 25942949 25942952 MYB TRANSFAC yes 118253781
chr1 25942952 25942956 H1TF2 TRANSFAC yes 118253782
chr1 25942952 25942956 NFE TRANSFAC yes 118253783
chr1 25942952 25942956 SRF TRANSFAC yes 118253784
chr1 25942965 25942979 PLAG1 JASPAR yes 118253785
chr1 25942968 25942983 ZIC4 JASPAR yes 118253786
chr1 25942974 25942987 NFKB1 JASPAR yes 118253787
chr1 25942976 25942993 BCL6B JASPAR yes 118253788
chr1 25942994 25942998 H1TF2 TRANSFAC yes 118253789
chr1 25942994 25942998 NFE TRANSFAC yes 118253790
chr1 25942994 25942998 SRF TRANSFAC yes 118253791
chr1 25943009 25943024 NR2C2 JASPAR yes 118253792
chr1 25943013 25943023 SP1 JASPAR yes 118253793
chr1 25943015 25943020 SP1 TRANSFAC yes 118253794
chr1 25943015 25943021 SP1 TRANSFAC yes 118253795
chr1 25943015 25943022 SP1 TRANSFAC yes 118253796
chr1 25943016 25943024 WT1 TRANSFAC yes 118253797
chr1 25943017 25943038 ZNF263 JASPAR yes 118253798
chr1 25943019 25943025 SP1 TRANSFAC yes 118253799
chr1 25943019 25943029 SP1 JASPAR yes 118253800
chr1 25943021 25943026 SP1 TRANSFAC yes 118253801
chr1 25943031 25943037 NFE2 TRANSFAC yes 118253802
chr1 25943062 25943076 GLIS3 JASPAR yes 118253803
chr1 25943066 25943076 ZNF740 JASPAR yes 118253804
chr1 25943087 25943100 TFAP2A JASPAR yes 118253805
chr1 25943087 25943100 TFAP2B JASPAR yes 118253806
chr1 25943087 25943100 TFAP2C JASPAR yes 118253807
chr1 25943096 25943102 MAZ TRANSFAC yes 118253808
chr1 25943098 25943107 HiNF-C TRANSFAC yes 118253809
chr1 25943098 25943108 SP1 JASPAR yes 118253810
chr1 25943099 25943105 SP1 TRANSFAC yes 118253811
chr1 25943100 25943105 SP1 TRANSFAC yes 118253812
chr1 25943101 25943106 SP1 TRANSFAC yes 118253813
chr1 25943101 25943107 SP1 TRANSFAC yes 118253814
chr1 25943122 25943133 E2F4 JASPAR yes 118253815
chr1 25943122 25943133 E2F6 JASPAR yes 118253816
chr1 25943123 25943134 E2F1 JASPAR yes 118253817
chr1 25943127 25943132 SP1 TRANSFAC yes 118253818
chr1 25943138 25943153 HNF4G JASPAR yes 118253819
chr1 25943138 25943153 NR2C2 JASPAR yes 118253820
chr1 25943144 25943150 NFE2 TRANSFAC yes 118253821
chr1 25943146 25943155 SP1 TRANSFAC yes 118253822
chr1 25943147 25943153 SP1 TRANSFAC yes 118253823
chr1 25943147 25943157 SP1 JASPAR yes 118253824
chr1 25943148 25943155 SP1 TRANSFAC yes 118253825
chr1 25943149 25943154 SP1 TRANSFAC yes 118253826
chr1 25943149 25943155 SP1 TRANSFAC yes 118253827
chr1 25943149 25943156 SP1 TRANSFAC yes 118253828
chr1 25943192 25943203 E2F4 JASPAR yes 118253829
chr1 25943192 25943203 E2F6 JASPAR yes 118253830
chr1 25943193 25943198 SP1 TRANSFAC yes 118253831
chr1 25943196 25943202 MAZ TRANSFAC yes 118253832
SNP sites on vista838[chr1:25942744-25943208]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25942780 rs561135388 CCCT C
RFX2 RFX5
174405
chr1 25942806 rs568739676 G A no 174406
chr1 25942827 rs536266418 C A
ESR2
174407
chr1 25942896 rs75219329 C G
RREB1 SP1 TFAP2A TFAP2B TFAP2C ZBTB33
174408
chr1 25942905 rs148673252 TG T
RREB1 SP1
174409
chr1 25943088 rs148235247 T G
TFAP2A TFAP2B TFAP2C
174410
chr1 25943096 rs141258614 G A,T
MAZ TFAP2A TFAP2B TFAP2C
174411
chr1 25943126 rs545990506 T C
E2F1 E2F4 E2F6
174412
chr1 25943133 rs150790186 C T
E2F1 E2F4 E2F6
174413
chr1 25943145 rs186092432 C T
HNF4G NFE2 NR2C2
174414
Genes possibly regulated by vista838[chr1:25942744-25943208]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25870071 25895377 + LDLRAP1 ENSG00000157978.7 25870071 0.85 1.0 345 27327
chr1 25943959 26112698 + MAN1C1 ENSG00000117643.10 25943959 0.72 1.0 346 99249
Expression level of Genes
Back to top
miRNAs possibly regulated by vista838[chr1:25942744-25943208]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results