EnhancerDB
  1. Home
  2. Enhancers
  3. vista839[chr1:25969249-25969578]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista839[chr1:25969249-25969578]
Back to top
Tissue distribution of vista839
Back to top
Transcription factor that possibly regulate vista839[chr1:25969249-25969578]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25969260 25969264 YY1 TRANSFAC yes 27591716
chr1 25969260 25969264 YY1 TRANSFAC yes 118253833
chr1 25969274 25969295 IRF1 JASPAR yes 27591717
chr1 25969274 25969295 IRF1 JASPAR yes 118253834
chr1 25969312 25969325 ELF1 JASPAR yes 27591718
chr1 25969312 25969325 ELF1 JASPAR yes 118253835
chr1 25969315 25969326 ELK4 JASPAR yes 27591719
chr1 25969315 25969326 FLI1 JASPAR yes 27591720
chr1 25969315 25969326 ELK4 JASPAR yes 118253836
chr1 25969315 25969326 FLI1 JASPAR yes 118253837
chr1 25969341 25969347 NFIC JASPAR yes 27591721
chr1 25969341 25969347 NFIC JASPAR yes 118253838
chr1 25969343 25969355 TAL1 JASPAR yes 27591722
chr1 25969343 25969355 TAL1 JASPAR yes 118253839
chr1 25969353 25969368 RUNX2 JASPAR yes 27591723
chr1 25969353 25969368 RUNX2 JASPAR yes 118253840
chr1 25969357 25969367 RUNX3 JASPAR yes 27591724
chr1 25969357 25969367 RUNX3 JASPAR yes 118253841
chr1 25969358 25969367 RUNX2 JASPAR yes 27591725
chr1 25969358 25969367 RUNX2 JASPAR yes 118253842
chr1 25969364 25969375 STAT1 JASPAR yes 27591726
chr1 25969364 25969375 STAT1 JASPAR yes 118253843
chr1 25969381 25969386 TFAP2A TRANSFAC yes 27591727
chr1 25969381 25969386 TFAP2A TRANSFAC yes 118253844
chr1 25969381 25969387 MZF1 JASPAR yes 27591728
chr1 25969381 25969387 MZF1 JASPAR yes 118253845
chr1 25969387 25969399 PBX1 JASPAR yes 27591729
chr1 25969387 25969399 PBX1 JASPAR yes 118253846
chr1 25969390 25969402 FOXI1 JASPAR yes 27591730
chr1 25969390 25969402 FOXI1 JASPAR yes 118253847
chr1 25969391 25969403 FOXC2 JASPAR yes 27591731
chr1 25969391 25969403 FOXC2 JASPAR yes 118253848
chr1 25969393 25969404 FOXA1 JASPAR yes 27591732
chr1 25969393 25969404 FOXA1 JASPAR yes 118253849
chr1 25969399 25969413 ONECUT3 JASPAR yes 27591733
chr1 25969399 25969413 ONECUT3 JASPAR yes 118253850
chr1 25969411 25969415 YY1 TRANSFAC yes 27591734
chr1 25969411 25969415 YY1 TRANSFAC yes 118253851
chr1 25969415 25969423 FOXL1 JASPAR yes 27591735
chr1 25969415 25969423 FOXL1 JASPAR yes 118253852
chr1 25969419 25969440 IRF1 JASPAR yes 27591736
chr1 25969419 25969440 IRF1 JASPAR yes 118253853
chr1 25969426 25969439 POU2F2 JASPAR yes 27591737
chr1 25969426 25969439 POU2F2 JASPAR yes 118253854
chr1 25969426 25969440 POU1F1 JASPAR yes 27591738
chr1 25969426 25969440 POU1F1 JASPAR yes 118253855
chr1 25969427 25969442 PRDM1 JASPAR yes 27591739
chr1 25969427 25969442 STAT2 JASPAR yes 27591740
chr1 25969427 25969442 PRDM1 JASPAR yes 118253856
chr1 25969427 25969442 STAT2 JASPAR yes 118253857
chr1 25969428 25969432 YY1 TRANSFAC yes 27591741
chr1 25969428 25969432 YY1 TRANSFAC yes 118253858
chr1 25969447 25969460 ZBTB18 JASPAR yes 27591742
chr1 25969447 25969460 ZBTB18 JASPAR yes 118253859
chr1 25969465 25969477 PBX1 JASPAR yes 27591743
chr1 25969465 25969477 PBX1 JASPAR yes 118253860
chr1 25969468 25969483 STAT1 JASPAR yes 27591744
chr1 25969468 25969483 STAT1 JASPAR yes 118253861
chr1 25969472 25969477 NFY TRANSFAC yes 27591745
chr1 25969472 25969477 NFY TRANSFAC yes 118253862
chr1 25969475 25969489 JUN JASPAR yes 27591746
chr1 25969475 25969489 JUN JASPAR yes 118253863
chr1 25969477 25969488 BATF JASPAR yes 27591747
chr1 25969477 25969488 BATF JASPAR yes 118253864
chr1 25969478 25969489 FOSL2 JASPAR yes 27591748
chr1 25969478 25969489 JUNB JASPAR yes 27591749
chr1 25969478 25969489 FOSL2 JASPAR yes 118253865
chr1 25969478 25969489 JUNB JASPAR yes 118253866
chr1 25969479 25969490 FOS JASPAR yes 27591750
chr1 25969479 25969490 FOSL1 JASPAR yes 27591751
chr1 25969479 25969490 JUND JASPAR yes 27591752
chr1 25969479 25969490 NFE2 JASPAR yes 27591753
chr1 25969479 25969490 FOS JASPAR yes 118253867
chr1 25969479 25969490 FOSL1 JASPAR yes 118253868
chr1 25969479 25969490 JUND JASPAR yes 118253869
chr1 25969479 25969490 NFE2 JASPAR yes 118253870
chr1 25969480 25969489 JDP2 JASPAR yes 27591754
chr1 25969480 25969489 JDP2 JASPAR yes 118253871
chr1 25969480 25969491 FOSL2 JASPAR yes 27591755
chr1 25969480 25969491 JUNB JASPAR yes 27591756
chr1 25969480 25969491 FOSL2 JASPAR yes 118253872
chr1 25969480 25969491 JUNB JASPAR yes 118253873
chr1 25969480 25969494 JUN JASPAR yes 27591757
chr1 25969480 25969494 JUN JASPAR yes 118253874
chr1 25969481 25969492 BATF JASPAR yes 27591758
chr1 25969481 25969492 BATF JASPAR yes 118253875
chr1 25969486 25969490 YY1 TRANSFAC yes 27591759
chr1 25969486 25969490 YY1 TRANSFAC yes 118253876
chr1 25969547 25969557 HOXB13 JASPAR yes 27591760
chr1 25969547 25969557 HOXD13 JASPAR yes 27591761
chr1 25969547 25969557 HOXB13 JASPAR yes 118253877
chr1 25969547 25969557 HOXD13 JASPAR yes 118253878
chr1 25969548 25969558 ALX3 JASPAR yes 27591762
chr1 25969548 25969558 ESX1 JASPAR yes 27591763
chr1 25969548 25969558 GSX1 JASPAR yes 27591764
chr1 25969548 25969558 GSX2 JASPAR yes 27591765
chr1 25969548 25969558 HOXB2 JASPAR yes 27591766
chr1 25969548 25969558 HOXB3 JASPAR yes 27591767
chr1 25969548 25969558 LBX2 JASPAR yes 27591768
chr1 25969548 25969558 LHX2 JASPAR yes 27591769
chr1 25969548 25969558 MEOX1 JASPAR yes 27591770
chr1 25969548 25969558 MEOX2 JASPAR yes 27591771
chr1 25969548 25969558 MIXL1 JASPAR yes 27591772
chr1 25969548 25969558 MNX1 JASPAR yes 27591773
chr1 25969548 25969558 NOTO JASPAR yes 27591774
chr1 25969548 25969558 ALX3 JASPAR yes 118253879
chr1 25969548 25969558 ESX1 JASPAR yes 118253880
chr1 25969548 25969558 GSX1 JASPAR yes 118253881
chr1 25969548 25969558 GSX2 JASPAR yes 118253882
chr1 25969548 25969558 HOXB2 JASPAR yes 118253883
chr1 25969548 25969558 HOXB3 JASPAR yes 118253884
chr1 25969548 25969558 LBX2 JASPAR yes 118253885
chr1 25969548 25969558 LHX2 JASPAR yes 118253886
chr1 25969548 25969558 MEOX1 JASPAR yes 118253887
chr1 25969548 25969558 MEOX2 JASPAR yes 118253888
chr1 25969548 25969558 MIXL1 JASPAR yes 118253889
chr1 25969548 25969558 MNX1 JASPAR yes 118253890
chr1 25969548 25969558 NOTO JASPAR yes 118253891
chr1 25969549 25969557 BSX JASPAR yes 27591775
chr1 25969549 25969557 DLX6 JASPAR yes 27591776
chr1 25969549 25969557 EN1 JASPAR yes 27591777
chr1 25969549 25969557 ISX JASPAR yes 27591778
chr1 25969549 25969557 LBX1 JASPAR yes 27591779
chr1 25969549 25969557 LHX9 JASPAR yes 27591780
chr1 25969549 25969557 LMX1A JASPAR yes 27591781
chr1 25969549 25969557 LMX1B JASPAR yes 27591782
chr1 25969549 25969557 NKX6-1 JASPAR yes 27591783
chr1 25969549 25969557 NKX6-2 JASPAR yes 27591784
chr1 25969549 25969557 PAX4 JASPAR yes 27591785
chr1 25969549 25969557 PDX1 JASPAR yes 27591786
chr1 25969549 25969557 PRRX1 JASPAR yes 27591787
chr1 25969549 25969557 RAX2 JASPAR yes 27591788
chr1 25969549 25969557 SHOX JASPAR yes 27591789
chr1 25969549 25969557 UNCX JASPAR yes 27591790
chr1 25969549 25969557 VAX1 JASPAR yes 27591791
chr1 25969549 25969557 VAX2 JASPAR yes 27591792
chr1 25969549 25969557 VSX1 JASPAR yes 27591793
chr1 25969549 25969557 VSX2 JASPAR yes 27591794
chr1 25969549 25969557 BSX JASPAR yes 118253892
chr1 25969549 25969557 DLX6 JASPAR yes 118253893
chr1 25969549 25969557 EN1 JASPAR yes 118253894
chr1 25969549 25969557 ISX JASPAR yes 118253895
chr1 25969549 25969557 LBX1 JASPAR yes 118253896
chr1 25969549 25969557 LHX9 JASPAR yes 118253897
chr1 25969549 25969557 LMX1A JASPAR yes 118253898
chr1 25969549 25969557 LMX1B JASPAR yes 118253899
chr1 25969549 25969557 NKX6-1 JASPAR yes 118253900
chr1 25969549 25969557 NKX6-2 JASPAR yes 118253901
chr1 25969549 25969557 PAX4 JASPAR yes 118253902
chr1 25969549 25969557 PDX1 JASPAR yes 118253903
chr1 25969549 25969557 PRRX1 JASPAR yes 118253904
chr1 25969549 25969557 RAX2 JASPAR yes 118253905
chr1 25969549 25969557 SHOX JASPAR yes 118253906
chr1 25969549 25969557 UNCX JASPAR yes 118253907
chr1 25969549 25969557 VAX1 JASPAR yes 118253908
chr1 25969549 25969557 VAX2 JASPAR yes 118253909
chr1 25969549 25969557 VSX1 JASPAR yes 118253910
chr1 25969549 25969557 VSX2 JASPAR yes 118253911
chr1 25969566 25969570 YY1 TRANSFAC yes 27591795
chr1 25969566 25969570 YY1 TRANSFAC yes 118253912
chr1 25969578 25969582 H4TF2 TRANSFAC yes 27591796
chr1 25969578 25969582 H4TF2 TRANSFAC yes 118253913
SNP sites on vista839[chr1:25969249-25969578]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25969386 rs112467097 G A
MZF1 TFAP2A
174688
chr1 25969544 rs191288888 A G no 174689
chr1 25969559 rs145832325 C T no 174690
Genes possibly regulated by vista839[chr1:25969249-25969578]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25870071 25895377 + LDLRAP1 ENSG00000157978.7 25870071 0.85 1.0 345 822
chr1 25943959 26112698 + MAN1C1 ENSG00000117643.10 25943959 0.72 1.0 346 74710
Expression level of Genes
Back to top
miRNAs possibly regulated by vista839[chr1:25969249-25969578]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results