EnhancerDB
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  3. vista849[chr1:26249033-26249281]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista849[chr1:26249033-26249281]
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Tissue distribution of vista849
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Transcription factor that possibly regulate vista849[chr1:26249033-26249281]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26249028 26249040 YY1 JASPAR yes 27614577
chr1 26249028 26249040 YY1 JASPAR yes 118254263
chr1 26249057 26249072 NR2C2 JASPAR yes 27614578
chr1 26249057 26249072 NR2C2 JASPAR yes 118254264
chr1 26249059 26249070 E2F6 JASPAR yes 27614579
chr1 26249059 26249070 E2F6 JASPAR yes 118254265
chr1 26249067 26249076 ZEB1 JASPAR yes 27614580
chr1 26249067 26249076 ZEB1 JASPAR yes 118254266
chr1 26249067 26249079 NHLH1 JASPAR yes 27614581
chr1 26249067 26249079 NHLH1 JASPAR yes 118254267
chr1 26249067 26249081 ZIC1 JASPAR yes 27614582
chr1 26249067 26249081 ZIC1 JASPAR yes 118254268
chr1 26249067 26249082 ZIC3 JASPAR yes 27614583
chr1 26249067 26249082 ZIC4 JASPAR yes 27614584
chr1 26249067 26249082 ZIC3 JASPAR yes 118254269
chr1 26249067 26249082 ZIC4 JASPAR yes 118254270
chr1 26249068 26249078 NHLH1 JASPAR yes 27614585
chr1 26249068 26249078 TCF3 JASPAR yes 27614586
chr1 26249068 26249078 TCF4 JASPAR yes 27614587
chr1 26249068 26249078 NHLH1 JASPAR yes 118254271
chr1 26249068 26249078 TCF3 JASPAR yes 118254272
chr1 26249068 26249078 TCF4 JASPAR yes 118254273
chr1 26249070 26249075 USF2 TRANSFAC yes 27614588
chr1 26249070 26249075 USF2 TRANSFAC yes 118254274
chr1 26249097 26249115 NFYA JASPAR yes 27614589
chr1 26249097 26249115 NFYA JASPAR yes 118254275
chr1 26249100 26249116 NFYA JASPAR yes 27614590
chr1 26249100 26249116 NFYA JASPAR yes 118254276
chr1 26249103 26249118 NFYB JASPAR yes 27614591
chr1 26249103 26249118 NFYB JASPAR yes 118254277
chr1 26249105 26249110 NFY TRANSFAC yes 27614592
chr1 26249105 26249110 NFY TRANSFAC yes 118254278
chr1 26249114 26249119 ETS2 TRANSFAC yes 27614593
chr1 26249114 26249119 ETS2 TRANSFAC yes 118254279
chr1 26249132 26249137 SP1 TRANSFAC yes 27614594
chr1 26249132 26249137 SP1 TRANSFAC yes 118254280
chr1 26249134 26249139 TFAP2A TRANSFAC yes 27614595
chr1 26249134 26249139 TFAP2A TRANSFAC yes 118254281
chr1 26249134 26249140 MZF1 JASPAR yes 27614596
chr1 26249134 26249140 MZF1 JASPAR yes 118254282
chr1 26249141 26249153 YY1 JASPAR yes 27614597
chr1 26249141 26249153 YY1 JASPAR yes 118254283
chr1 26249142 26249158 E2F2 JASPAR yes 27614598
chr1 26249142 26249158 E2F2 JASPAR yes 118254284
chr1 26249153 26249171 MAFF JASPAR yes 27614599
chr1 26249153 26249171 MAFF JASPAR yes 118254285
chr1 26249155 26249158 MYB TRANSFAC yes 27614600
chr1 26249155 26249158 MYB TRANSFAC yes 118254286
chr1 26249156 26249166 FIGLA JASPAR yes 27614601
chr1 26249156 26249166 MSC JASPAR yes 27614602
chr1 26249156 26249166 MYF6 JASPAR yes 27614603
chr1 26249156 26249166 TFAP4 JASPAR yes 27614604
chr1 26249156 26249166 FIGLA JASPAR yes 118254287
chr1 26249156 26249166 MSC JASPAR yes 118254288
chr1 26249156 26249166 MYF6 JASPAR yes 118254289
chr1 26249156 26249166 TFAP4 JASPAR yes 118254290
chr1 26249169 26249178 THAP1 JASPAR yes 27614605
chr1 26249169 26249178 THAP1 JASPAR yes 118254291
chr1 26249172 26249176 LFA1 TRANSFAC yes 27614606
chr1 26249172 26249176 LFA1 TRANSFAC yes 118254292
chr1 26249200 26249218 ESR1 JASPAR yes 27614607
chr1 26249200 26249218 ESR1 JASPAR yes 118254293
chr1 26249232 26249248 NFYA JASPAR yes 27614608
chr1 26249232 26249248 NFYA JASPAR yes 118254294
chr1 26249233 26249251 NFYA JASPAR yes 27614609
chr1 26249233 26249251 NFYA JASPAR yes 118254295
chr1 26249237 26249241 H1TF2 TRANSFAC yes 27614610
chr1 26249237 26249241 NFE TRANSFAC yes 27614611
chr1 26249237 26249241 SRF TRANSFAC yes 27614612
chr1 26249237 26249241 H1TF2 TRANSFAC yes 118254296
chr1 26249237 26249241 NFE TRANSFAC yes 118254297
chr1 26249237 26249241 SRF TRANSFAC yes 118254298
chr1 26249243 26249254 SPDEF JASPAR yes 27614613
chr1 26249243 26249254 SPDEF JASPAR yes 118254299
chr1 26249250 26249255 SP1 TRANSFAC yes 27614614
chr1 26249250 26249255 SP1 TRANSFAC yes 118254300
chr1 26249279 26249289 MAX JASPAR yes 27614615
chr1 26249279 26249289 MAX JASPAR yes 118254301
chr1 26249279 26249291 HES5 JASPAR yes 27614616
chr1 26249279 26249291 HES7 JASPAR yes 27614617
chr1 26249279 26249291 HES5 JASPAR yes 118254302
chr1 26249279 26249291 HES7 JASPAR yes 118254303
chr1 26249280 26249290 BHLHE40 JASPAR yes 27614618
chr1 26249280 26249290 BHLHE41 JASPAR yes 27614619
chr1 26249280 26249290 CLOCK JASPAR yes 27614620
chr1 26249280 26249290 HEY1 JASPAR yes 27614621
chr1 26249280 26249290 HEY2 JASPAR yes 27614622
chr1 26249280 26249290 MAX JASPAR yes 27614623
chr1 26249280 26249290 MLXIPL JASPAR yes 27614624
chr1 26249280 26249290 MLX JASPAR yes 27614625
chr1 26249280 26249290 MNT JASPAR yes 27614626
chr1 26249280 26249290 TFE3 JASPAR yes 27614627
chr1 26249280 26249290 TFEB JASPAR yes 27614628
chr1 26249280 26249290 BHLHE40 JASPAR yes 118254304
chr1 26249280 26249290 BHLHE41 JASPAR yes 118254305
chr1 26249280 26249290 CLOCK JASPAR yes 118254306
chr1 26249280 26249290 HEY1 JASPAR yes 118254307
chr1 26249280 26249290 HEY2 JASPAR yes 118254308
chr1 26249280 26249290 MAX JASPAR yes 118254309
chr1 26249280 26249290 MLXIPL JASPAR yes 118254310
chr1 26249280 26249290 MLX JASPAR yes 118254311
chr1 26249280 26249290 MNT JASPAR yes 118254312
chr1 26249280 26249290 TFE3 JASPAR yes 118254313
chr1 26249280 26249290 TFEB JASPAR yes 118254314
SNP sites on vista849[chr1:26249033-26249281]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26249233 rs11809980 C G
NFYA
177080
chr1 26249234 rs567660467 AG A
NFYA
177081
chr1 26249270 rs11810616 A G no 177082
Genes possibly regulated by vista849[chr1:26249033-26249281]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26158414 26185903 - AUNIP ENSG00000127423.6 26185903 0.86 0.99 351 36870
chr1 26187701 26197744 - PAQR7 ENSG00000182749.5 26197744 0.83 1.0 352 48711
chr1 26210672 26233482 - STMN1 ENSG00000117632.16 26233482 0.97 0.98 353 84449
chr1 26286258 26324648 - PAFAH2 ENSG00000158006.9 26324648 0.88 1.0 354 24633
chr1 26346375 26362955 + EXTL1 ENSG00000158008.5 26346375 0.86 1.0 355 2906
Expression level of Genes
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miRNAs possibly regulated by vista849[chr1:26249033-26249281]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results