EnhancerDB
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  3. vista851[chr1:26319994-26320468]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista851[chr1:26319994-26320468]
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Tissue distribution of vista851
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Transcription factor that possibly regulate vista851[chr1:26319994-26320468]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26319986 26319998 PKNOX1 JASPAR yes 27617823
chr1 26319986 26319998 PKNOX2 JASPAR yes 27617824
chr1 26319986 26319998 TGIF1 JASPAR yes 27617825
chr1 26319986 26319998 TGIF2 JASPAR yes 27617826
chr1 26319986 26319998 PKNOX1 JASPAR yes 118254323
chr1 26319986 26319998 PKNOX2 JASPAR yes 118254324
chr1 26319986 26319998 TGIF1 JASPAR yes 118254325
chr1 26319986 26319998 TGIF2 JASPAR yes 118254326
chr1 26319993 26320005 PKNOX2 JASPAR yes 27617827
chr1 26319993 26320005 PKNOX2 JASPAR yes 118254327
chr1 26319994 26320004 NKX2-3 JASPAR yes 27617828
chr1 26319994 26320004 NKX2-3 JASPAR yes 118254328
chr1 26320019 26320022 MYB TRANSFAC yes 27617829
chr1 26320019 26320022 MYB TRANSFAC yes 118254329
chr1 26320021 26320033 PBX1 JASPAR yes 27617830
chr1 26320021 26320033 PBX1 JASPAR yes 118254330
chr1 26320030 26320034 YY1 TRANSFAC yes 27617831
chr1 26320030 26320034 YY1 TRANSFAC yes 118254331
chr1 26320034 26320037 MYB TRANSFAC yes 27617832
chr1 26320034 26320037 MYB TRANSFAC yes 118254332
chr1 26320042 26320056 GATA2 JASPAR yes 27617833
chr1 26320042 26320056 GATA2 JASPAR yes 118254333
chr1 26320044 26320052 GATA3 JASPAR yes 27617834
chr1 26320044 26320052 GATA5 JASPAR yes 27617835
chr1 26320044 26320052 GATA3 JASPAR yes 118254334
chr1 26320044 26320052 GATA5 JASPAR yes 118254335
chr1 26320053 26320065 FOXC2 JASPAR yes 27617836
chr1 26320053 26320065 FOXC2 JASPAR yes 118254336
chr1 26320054 26320065 FOXC1 JASPAR yes 27617837
chr1 26320054 26320065 FOXC1 JASPAR yes 118254337
chr1 26320055 26320059 YY1 TRANSFAC yes 27617838
chr1 26320055 26320059 YY1 TRANSFAC yes 118254338
chr1 26320072 26320078 GATA3 JASPAR yes 27617839
chr1 26320072 26320078 GATA3 JASPAR yes 118254339
chr1 26320079 26320100 IRF1 JASPAR yes 27617840
chr1 26320079 26320100 IRF1 JASPAR yes 118254340
chr1 26320084 26320088 YY1 TRANSFAC yes 27617841
chr1 26320084 26320088 YY1 TRANSFAC yes 118254341
chr1 26320086 26320092 TCF4 TRANSFAC yes 27617842
chr1 26320086 26320092 TCF4 TRANSFAC yes 118254342
chr1 26320087 26320102 STAT2 JASPAR yes 27617843
chr1 26320087 26320102 STAT2 JASPAR yes 118254343
chr1 26320092 26320102 MEF2A JASPAR yes 27617844
chr1 26320092 26320102 MEF2A JASPAR yes 118254344
chr1 26320104 26320119 FOXP1 JASPAR yes 27617845
chr1 26320104 26320119 FOXP1 JASPAR yes 118254345
chr1 26320119 26320123 H1TF2 TRANSFAC yes 27617846
chr1 26320119 26320123 NFE TRANSFAC yes 27617847
chr1 26320119 26320123 SRF TRANSFAC yes 27617848
chr1 26320119 26320123 H1TF2 TRANSFAC yes 118254346
chr1 26320119 26320123 NFE TRANSFAC yes 118254347
chr1 26320119 26320123 SRF TRANSFAC yes 118254348
chr1 26320129 26320144 STAT2 JASPAR yes 27617849
chr1 26320129 26320144 STAT2 JASPAR yes 118254349
chr1 26320186 26320203 RARA JASPAR yes 27617850
chr1 26320186 26320203 RARA JASPAR yes 118254350
chr1 26320206 26320219 NR2F1 JASPAR yes 27617851
chr1 26320206 26320219 NR2F1 JASPAR yes 118254351
chr1 26320207 26320225 RARA JASPAR yes 27617852
chr1 26320207 26320225 RARA JASPAR yes 118254352
chr1 26320209 26320217 NR4A2 JASPAR yes 27617853
chr1 26320209 26320217 NR4A2 JASPAR yes 118254353
chr1 26320210 26320224 RXRB JASPAR yes 27617854
chr1 26320210 26320224 RXRB JASPAR yes 118254354
chr1 26320216 26320226 MZF1 JASPAR yes 27617855
chr1 26320216 26320226 MZF1 JASPAR yes 118254355
chr1 26320217 26320223 MZF1 JASPAR yes 27617856
chr1 26320217 26320223 MZF1 JASPAR yes 118254356
chr1 26320263 26320268 SP1 TRANSFAC yes 27617857
chr1 26320263 26320268 SP1 TRANSFAC yes 118254357
chr1 26320272 26320284 PKNOX1 JASPAR yes 27617858
chr1 26320272 26320284 PKNOX2 JASPAR yes 27617859
chr1 26320272 26320284 TGIF1 JASPAR yes 27617860
chr1 26320272 26320284 TGIF2 JASPAR yes 27617861
chr1 26320272 26320284 PKNOX1 JASPAR yes 118254358
chr1 26320272 26320284 PKNOX2 JASPAR yes 118254359
chr1 26320272 26320284 TGIF1 JASPAR yes 118254360
chr1 26320272 26320284 TGIF2 JASPAR yes 118254361
chr1 26320273 26320283 HEY2 JASPAR yes 27617862
chr1 26320273 26320283 ID4 JASPAR yes 27617863
chr1 26320273 26320283 MSC JASPAR yes 27617864
chr1 26320273 26320283 MYF6 JASPAR yes 27617865
chr1 26320273 26320283 HEY2 JASPAR yes 118254362
chr1 26320273 26320283 ID4 JASPAR yes 118254363
chr1 26320273 26320283 MSC JASPAR yes 118254364
chr1 26320273 26320283 MYF6 JASPAR yes 118254365
chr1 26320274 26320283 SNAI2 JASPAR yes 27617866
chr1 26320274 26320283 SNAI2 JASPAR yes 118254366
chr1 26320275 26320280 USF2 TRANSFAC yes 27617867
chr1 26320275 26320280 USF2 TRANSFAC yes 118254367
chr1 26320277 26320285 MEIS3 JASPAR yes 27617868
chr1 26320277 26320285 MEIS3 JASPAR yes 118254368
chr1 26320278 26320282 NFE TRANSFAC yes 27617869
chr1 26320278 26320282 NFE TRANSFAC yes 118254369
chr1 26320283 26320294 USF2 JASPAR yes 27617870
chr1 26320283 26320294 USF2 JASPAR yes 118254370
chr1 26320284 26320294 TFE3 JASPAR yes 27617871
chr1 26320284 26320294 TFEB JASPAR yes 27617872
chr1 26320284 26320294 TFEC JASPAR yes 27617873
chr1 26320284 26320294 TFE3 JASPAR yes 118254371
chr1 26320284 26320294 TFEB JASPAR yes 118254372
chr1 26320284 26320294 TFEC JASPAR yes 118254373
chr1 26320298 26320310 NHLH1 JASPAR yes 27617874
chr1 26320298 26320310 NHLH1 JASPAR yes 118254374
chr1 26320299 26320309 NHLH1 JASPAR yes 27617875
chr1 26320299 26320309 NHLH1 JASPAR yes 118254375
chr1 26320308 26320322 RXRB JASPAR yes 27617876
chr1 26320308 26320322 RXRB JASPAR yes 118254376
chr1 26320316 26320320 NFE TRANSFAC yes 27617877
chr1 26320316 26320320 NFE TRANSFAC yes 118254377
chr1 26320316 26320327 CDX2 JASPAR yes 27617878
chr1 26320316 26320327 CDX2 JASPAR yes 118254378
chr1 26320317 26320328 HOXA10 JASPAR yes 27617879
chr1 26320317 26320328 HOXC11 JASPAR yes 27617880
chr1 26320317 26320328 HOXC12 JASPAR yes 27617881
chr1 26320317 26320328 HOXA10 JASPAR yes 118254379
chr1 26320317 26320328 HOXC11 JASPAR yes 118254380
chr1 26320317 26320328 HOXC12 JASPAR yes 118254381
chr1 26320318 26320327 CDX1 JASPAR yes 27617882
chr1 26320318 26320327 CDX1 JASPAR yes 118254382
chr1 26320318 26320328 HOXC10 JASPAR yes 27617883
chr1 26320318 26320328 HOXD11 JASPAR yes 27617884
chr1 26320318 26320328 HOXD13 JASPAR yes 27617885
chr1 26320318 26320328 HOXC10 JASPAR yes 118254383
chr1 26320318 26320328 HOXD11 JASPAR yes 118254384
chr1 26320318 26320328 HOXD13 JASPAR yes 118254385
chr1 26320332 26320346 GATA2 JASPAR yes 27617886
chr1 26320332 26320346 TCF7L2 JASPAR yes 27617887
chr1 26320332 26320346 GATA2 JASPAR yes 118254386
chr1 26320332 26320346 TCF7L2 JASPAR yes 118254387
chr1 26320334 26320342 GATA3 JASPAR yes 27617888
chr1 26320334 26320342 GATA3 JASPAR yes 118254388
chr1 26320350 26320365 STAT1 JASPAR yes 27617889
chr1 26320350 26320365 STAT1 JASPAR yes 118254389
chr1 26320352 26320363 STAT1 JASPAR yes 27617890
chr1 26320352 26320363 STAT3 JASPAR yes 27617891
chr1 26320352 26320363 STAT1 JASPAR yes 118254390
chr1 26320352 26320363 STAT3 JASPAR yes 118254391
chr1 26320391 26320412 ZNF263 JASPAR yes 27617892
chr1 26320391 26320412 ZNF263 JASPAR yes 118254392
chr1 26320395 26320411 ZNF143 JASPAR yes 27617893
chr1 26320395 26320411 ZNF143 JASPAR yes 118254393
chr1 26320398 26320403 ETS2 TRANSFAC yes 27617894
chr1 26320398 26320403 ETS2 TRANSFAC yes 118254394
chr1 26320416 26320427 STAT3 JASPAR yes 27617895
chr1 26320416 26320427 STAT3 JASPAR yes 118254395
chr1 26320421 26320441 TP63 JASPAR yes 27617896
chr1 26320421 26320441 TP63 JASPAR yes 118254396
chr1 26320433 26320448 TP53 JASPAR yes 27617897
chr1 26320433 26320448 TP53 JASPAR yes 118254397
chr1 26320453 26320458 ETS2 TRANSFAC yes 27617898
chr1 26320453 26320458 ETS2 TRANSFAC yes 118254398
SNP sites on vista851[chr1:26319994-26320468]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26320212 rs530155105 G A
NR2F1 NR4A2 RARA RXRB
177576
chr1 26320246 rs2992055 A C,G no 177577
chr1 26320447 rs192951976 C T
TP53
177578
Genes possibly regulated by vista851[chr1:26319994-26320468]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26210672 26233482 - STMN1 ENSG00000117632.16 26233482 0.97 0.98 353 13488
chr1 26286258 26324648 - PAFAH2 ENSG00000158006.9 26324648 0.88 1.0 354 95820
chr1 26346375 26362955 + EXTL1 ENSG00000158008.5 26346375 0.86 1.0 355 74093
chr1 26363743 26372624 - SLC30A2 ENSG00000158014.10 26372624 0.97 0.88 356 47844
chr1 26377795 26394927 - TRIM63 ENSG00000158022.6 26394927 1.0 1.0 357 25541
Expression level of Genes
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miRNAs possibly regulated by vista851[chr1:26319994-26320468]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results