EnhancerDB
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  3. vista853[chr1:26337765-26338024]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista853[chr1:26337765-26338024]
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Tissue distribution of vista853
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Transcription factor that possibly regulate vista853[chr1:26337765-26338024]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26337762 26337769 SPIB JASPAR yes 27619411
chr1 26337762 26337769 SPIB JASPAR yes 118254446
chr1 26337784 26337788 H1TF2 TRANSFAC yes 27619412
chr1 26337784 26337788 NFE TRANSFAC yes 27619413
chr1 26337784 26337788 SRF TRANSFAC yes 27619414
chr1 26337784 26337788 H1TF2 TRANSFAC yes 118254447
chr1 26337784 26337788 NFE TRANSFAC yes 118254448
chr1 26337784 26337788 SRF TRANSFAC yes 118254449
chr1 26337792 26337800 RHOXF1 JASPAR yes 27619415
chr1 26337792 26337800 RHOXF1 JASPAR yes 118254450
chr1 26337807 26337819 PROX1 JASPAR yes 27619416
chr1 26337807 26337819 PROX1 JASPAR yes 118254451
chr1 26337809 26337814 SP1 TRANSFAC yes 27619417
chr1 26337809 26337814 SP1 TRANSFAC yes 118254452
chr1 26337824 26337845 ZNF263 JASPAR yes 27619418
chr1 26337824 26337845 ZNF263 JASPAR yes 118254453
chr1 26337827 26337836 THAP1 JASPAR yes 27619419
chr1 26337827 26337836 THAP1 JASPAR yes 118254454
chr1 26337828 26337849 ZNF263 JASPAR yes 27619420
chr1 26337828 26337849 ZNF263 JASPAR yes 118254455
chr1 26337829 26337850 ZNF263 JASPAR yes 27619421
chr1 26337829 26337850 ZNF263 JASPAR yes 118254456
chr1 26337830 26337834 LFA1 TRANSFAC yes 27619422
chr1 26337830 26337834 LFA1 TRANSFAC yes 118254457
chr1 26337839 26337847 TBX15 JASPAR yes 27619423
chr1 26337839 26337847 TBX15 JASPAR yes 118254458
chr1 26337840 26337845 SP1 TRANSFAC yes 27619424
chr1 26337840 26337845 SP1 TRANSFAC yes 118254459
chr1 26337865 26337879 TCF7L2 JASPAR yes 27619425
chr1 26337865 26337879 TCF7L2 JASPAR yes 118254460
chr1 26337914 26337932 TP63 JASPAR yes 27619426
chr1 26337914 26337932 TP63 JASPAR yes 118254461
chr1 26337936 26337951 MEF2A JASPAR yes 27619427
chr1 26337936 26337951 MEF2A JASPAR yes 118254462
chr1 26337937 26337952 MEF2C JASPAR yes 27619428
chr1 26337937 26337952 MEF2C JASPAR yes 118254463
chr1 26337946 26337950 YY1 TRANSFAC yes 27619429
chr1 26337946 26337950 YY1 TRANSFAC yes 118254464
chr1 26337961 26337965 YY1 TRANSFAC yes 27619430
chr1 26337961 26337965 YY1 TRANSFAC yes 118254465
chr1 26337987 26338005 RARA JASPAR yes 27619431
chr1 26337987 26338005 RARA JASPAR yes 118254466
chr1 26337994 26337998 NFE TRANSFAC yes 27619432
chr1 26337994 26337998 NFE TRANSFAC yes 118254467
chr1 26337994 26337999 GATA1 TRANSFAC yes 27619433
chr1 26337994 26337999 GATA1 TRANSFAC yes 118254468
chr1 26337994 26338000 GATA3 JASPAR yes 27619434
chr1 26337994 26338000 GATA3 JASPAR yes 118254469
chr1 26337997 26338018 IRF1 JASPAR yes 27619435
chr1 26337997 26338018 IRF1 JASPAR yes 118254470
chr1 26337999 26338014 PRDM1 JASPAR yes 27619436
chr1 26337999 26338014 PRDM1 JASPAR yes 118254471
chr1 26337999 26338020 IRF1 JASPAR yes 27619437
chr1 26337999 26338020 IRF1 JASPAR yes 118254472
chr1 26338002 26338023 IRF1 JASPAR yes 27619438
chr1 26338002 26338023 IRF1 JASPAR yes 118254473
chr1 26338005 26338020 FOXP1 JASPAR yes 27619439
chr1 26338005 26338020 FOXP1 JASPAR yes 118254474
chr1 26338007 26338022 FOXP1 JASPAR yes 27619440
chr1 26338007 26338022 FOXP1 JASPAR yes 118254475
chr1 26338008 26338023 FOXP1 JASPAR yes 27619441
chr1 26338008 26338023 FOXP1 JASPAR yes 118254476
chr1 26338009 26338024 FOXP1 JASPAR yes 27619442
chr1 26338009 26338024 FOXP1 JASPAR yes 118254477
chr1 26338011 26338026 MEF2A JASPAR yes 27619443
chr1 26338011 26338026 MEF2A JASPAR yes 118254478
chr1 26338012 26338027 MEF2C JASPAR yes 27619444
chr1 26338012 26338027 MEF2C JASPAR yes 118254479
SNP sites on vista853[chr1:26337765-26338024]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26337800 rs35473640 C G,T
RHOXF1
177747
chr1 26337967 rs146178484 A G no 177748
chr1 26338008 rs11376256 C CT
FOXP1 IRF1 PRDM1
177749
chr1 26338008 rs200947253 CT C
FOXP1 IRF1 PRDM1
177750
chr1 26338008 rs34996602 C CT
FOXP1 IRF1 PRDM1
177751
Genes possibly regulated by vista853[chr1:26337765-26338024]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26286258 26324648 - PAFAH2 ENSG00000158006.9 26324648 0.88 1.0 354 86883
chr1 26346375 26362955 + EXTL1 ENSG00000158008.5 26346375 0.86 1.0 355 91649
chr1 26363743 26372624 - SLC30A2 ENSG00000158014.10 26372624 0.97 0.88 356 65400
chr1 26377795 26394927 - TRIM63 ENSG00000158022.6 26394927 1.0 1.0 357 43097
chr1 26437664 26452034 + PDIK1L ENSG00000175087.5 26437664 0.68 0.99 358 360
Expression level of Genes
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miRNAs possibly regulated by vista853[chr1:26337765-26338024]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results