EnhancerDB
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  3. vista855[chr1:26452850-26453250]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista855[chr1:26452850-26453250]
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Tissue distribution of vista855
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Transcription factor that possibly regulate vista855[chr1:26452850-26453250]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26452567 26453470 POLR2A UCSC Txn Factor no Conserved 107802523
chr1 26452894 26452904 GSC JASPAR yes 27626550
chr1 26452894 26452904 GSC JASPAR yes 118254533
chr1 26452909 26452914 MYC TRANSFAC yes 27626551
chr1 26452909 26452914 MYC TRANSFAC yes 118254534
chr1 26452918 26452937 RFX2 JASPAR yes 27626552
chr1 26452918 26452937 RFX2 JASPAR yes 118254535
chr1 26452936 26452944 GATA3 JASPAR yes 27626553
chr1 26452936 26452944 GATA3 JASPAR yes 118254536
chr1 26452947 26452960 JUN JASPAR yes 27626554
chr1 26452947 26452960 JUN JASPAR yes 118254537
chr1 26452948 26452961 ATF4 JASPAR yes 27626555
chr1 26452948 26452961 ATF4 JASPAR yes 118254538
chr1 26452951 26452962 NFIL3 JASPAR yes 27626556
chr1 26452951 26452962 NFIL3 JASPAR yes 118254539
chr1 26452967 26452982 RUNX2 JASPAR yes 27626557
chr1 26452967 26452982 RUNX2 JASPAR yes 118254540
chr1 26453009 26453015 NFIC JASPAR yes 27626558
chr1 26453009 26453015 NFIC JASPAR yes 118254541
chr1 26453010 26453026 NFYA JASPAR yes 27626559
chr1 26453010 26453026 NFYA JASPAR yes 118254542
chr1 26453011 26453029 NFYA JASPAR yes 27626560
chr1 26453011 26453029 NFYA JASPAR yes 118254543
chr1 26453012 26453024 PBX1 JASPAR yes 27626561
chr1 26453012 26453024 PBX1 JASPAR yes 118254544
chr1 26453015 26453019 H1TF2 TRANSFAC yes 27626562
chr1 26453015 26453019 NFE TRANSFAC yes 27626563
chr1 26453015 26453019 SRF TRANSFAC yes 27626564
chr1 26453015 26453019 H1TF2 TRANSFAC yes 118254545
chr1 26453015 26453019 NFE TRANSFAC yes 118254546
chr1 26453015 26453019 SRF TRANSFAC yes 118254547
chr1 26453038 26453049 NFE2L2 JASPAR yes 27626565
chr1 26453038 26453049 NFE2L2 JASPAR yes 118254548
chr1 26453058 26453073 RUNX2 JASPAR yes 27626566
chr1 26453058 26453073 RUNX2 JASPAR yes 118254549
chr1 26453061 26453072 RUNX1 JASPAR yes 27626567
chr1 26453061 26453072 RUNX1 JASPAR yes 118254550
chr1 26453062 26453072 RUNX3 JASPAR yes 27626568
chr1 26453062 26453072 RUNX3 JASPAR yes 118254551
chr1 26453063 26453072 RUNX2 JASPAR yes 27626569
chr1 26453063 26453072 RUNX2 JASPAR yes 118254552
chr1 26453067 26453079 HLF JASPAR yes 27626570
chr1 26453067 26453079 HLF JASPAR yes 118254553
chr1 26453077 26453080 MYB TRANSFAC yes 27626571
chr1 26453077 26453080 MYB TRANSFAC yes 118254554
chr1 26453082 26453092 NKX2-3 JASPAR yes 27626572
chr1 26453082 26453092 NKX2-3 JASPAR yes 118254555
chr1 26453083 26453092 NKX2-8 JASPAR yes 27626573
chr1 26453083 26453092 NKX2-8 JASPAR yes 118254556
chr1 26453108 26453116 TBX5 JASPAR yes 27626574
chr1 26453108 26453116 TBX5 JASPAR yes 118254557
chr1 26453110 26453123 SCRT2 JASPAR yes 27626575
chr1 26453110 26453123 SCRT2 JASPAR yes 118254558
chr1 26453146 26453161 PRDM1 JASPAR yes 27626576
chr1 26453146 26453161 PRDM1 JASPAR yes 118254559
chr1 26453152 26453166 RXRG JASPAR yes 27626577
chr1 26453152 26453166 RXRG JASPAR yes 118254560
chr1 26453165 26453169 YY1 TRANSFAC yes 27626578
chr1 26453165 26453169 YY1 TRANSFAC yes 118254561
chr1 26453180 26453201 IRF1 JASPAR yes 27626579
chr1 26453180 26453201 IRF1 JASPAR yes 118254562
chr1 26453181 26453202 ZNF263 JASPAR yes 27626580
chr1 26453181 26453202 ZNF263 JASPAR yes 118254563
chr1 26453182 26453187 ETS2 TRANSFAC yes 27626581
chr1 26453182 26453187 ETS2 TRANSFAC yes 118254564
chr1 26453182 26453190 FEV JASPAR yes 27626582
chr1 26453182 26453190 FEV JASPAR yes 118254565
chr1 26453188 26453203 FOXP1 JASPAR yes 27626583
chr1 26453188 26453203 FOXP1 JASPAR yes 118254566
chr1 26453191 26453206 FOXP1 JASPAR yes 27626584
chr1 26453191 26453206 FOXP1 JASPAR yes 118254567
chr1 26453207 26453222 HNF4A JASPAR yes 27626585
chr1 26453207 26453222 HNF4A JASPAR yes 118254568
chr1 26453208 26453223 HNF4G JASPAR yes 27626586
chr1 26453208 26453223 HNF4G JASPAR yes 118254569
chr1 26453220 26453241 IRF1 JASPAR yes 27626587
chr1 26453220 26453241 IRF1 JASPAR yes 118254570
chr1 26453222 26453237 STAT2 JASPAR yes 27626588
chr1 26453222 26453237 STAT2 JASPAR yes 118254571
chr1 26453228 26453239 FLI1 JASPAR yes 27626589
chr1 26453228 26453239 FLI1 JASPAR yes 118254572
chr1 26453228 26453241 ELF3 JASPAR yes 27626590
chr1 26453228 26453241 ELF3 JASPAR yes 118254573
chr1 26453229 26453233 YY1 TRANSFAC yes 27626591
chr1 26453229 26453233 YY1 TRANSFAC yes 118254574
chr1 26453229 26453239 ERF JASPAR yes 27626592
chr1 26453229 26453239 ERG JASPAR yes 27626593
chr1 26453229 26453239 ETS1 JASPAR yes 27626594
chr1 26453229 26453239 FEV JASPAR yes 27626595
chr1 26453229 26453239 FLI1 JASPAR yes 27626596
chr1 26453229 26453239 ERF JASPAR yes 118254575
chr1 26453229 26453239 ERG JASPAR yes 118254576
chr1 26453229 26453239 ETS1 JASPAR yes 118254577
chr1 26453229 26453239 FEV JASPAR yes 118254578
chr1 26453229 26453239 FLI1 JASPAR yes 118254579
chr1 26453229 26453240 ELF5 JASPAR yes 27626597
chr1 26453229 26453240 ETV2 JASPAR yes 27626598
chr1 26453229 26453240 ELF5 JASPAR yes 118254580
chr1 26453229 26453240 ETV2 JASPAR yes 118254581
chr1 26453229 26453241 EHF JASPAR yes 27626599
chr1 26453229 26453241 EHF JASPAR yes 118254582
chr1 26453229 26453242 ELF1 JASPAR yes 27626600
chr1 26453229 26453242 ELF1 JASPAR yes 118254583
chr1 26453230 26453238 FEV JASPAR yes 27626601
chr1 26453230 26453238 FEV JASPAR yes 118254584
chr1 26453248 26453252 YY1 TRANSFAC yes 27626602
chr1 26453248 26453252 YY1 TRANSFAC yes 118254585
SNP sites on vista855[chr1:26452850-26453250]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26452980 rs149874402 C A
POLR2A RUNX2
178448
chr1 26453069 rs555839873 G A
HLF POLR2A RUNX1 RUNX2 RUNX3
178449
chr1 26453077 rs144962562 A T
HLF MYB POLR2A
178450
chr1 26453217 rs180994265 G C
HNF4A HNF4G POLR2A
178451
Genes possibly regulated by vista855[chr1:26452850-26453250]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26363743 26372624 - SLC30A2 ENSG00000158014.10 26372624 0.97 0.88 356 19774
chr1 26377795 26394927 - TRIM63 ENSG00000158022.6 26394927 1.0 1.0 357 42077
chr1 26437664 26452034 + PDIK1L ENSG00000175087.5 26437664 0.68 0.99 358 84814
chr1 26485511 26489119 + FAM110D ENSG00000197245.4 26485511 0.82 0.91 359 67739
chr1 26496362 26498551 + ZNF593 ENSG00000142684.7 26496362 0.9 1.0 360 56888
chr1 26503894 26516377 + CNKSR1 ENSG00000142675.13 26503894 0.84 1.0 361 49356
chr1 26517052 26529459 + CATSPER4 ENSG00000188782.3 26517052 0.92 1.0 362 36198
Expression level of Genes
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miRNAs possibly regulated by vista855[chr1:26452850-26453250]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results