EnhancerDB
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  3. vista862[chr1:26615527-26615997]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista862[chr1:26615527-26615997]
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Tissue distribution of vista862
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Transcription factor that possibly regulate vista862[chr1:26615527-26615997]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26615557 26615563 SOX10 JASPAR yes 27631949
chr1 26615557 26615563 SOX10 JASPAR yes 118254873
chr1 26615580 26615587 NKX3-1 JASPAR yes 27631950
chr1 26615580 26615587 NKX3-1 JASPAR yes 118254874
chr1 26615581 26615589 FOXC1 JASPAR yes 27631951
chr1 26615581 26615589 FOXC1 JASPAR yes 118254875
chr1 26615584 26615598 TLX1 JASPAR yes 27631952
chr1 26615584 26615598 TLX1 JASPAR yes 118254876
chr1 26615585 26615599 TLX1 JASPAR yes 27631953
chr1 26615585 26615599 TLX1 JASPAR yes 118254877
chr1 26615588 26615608 RREB1 JASPAR yes 27631954
chr1 26615588 26615608 RREB1 JASPAR yes 118254878
chr1 26615595 26615615 TP53 JASPAR yes 27631955
chr1 26615595 26615615 TP53 JASPAR yes 118254879
chr1 26615628 26615633 SP1 TRANSFAC yes 27631956
chr1 26615628 26615633 SP1 TRANSFAC yes 118254880
chr1 26615628 26615637 HIC2 JASPAR yes 27631957
chr1 26615628 26615637 HIC2 JASPAR yes 118254881
chr1 26615630 26615649 CTCF JASPAR yes 27631958
chr1 26615630 26615649 CTCF JASPAR yes 118254882
chr1 26615631 26615635 LFA1 TRANSFAC yes 27631959
chr1 26615631 26615635 LFA1 TRANSFAC yes 118254883
chr1 26615641 26615645 LFA1 TRANSFAC yes 27631960
chr1 26615641 26615645 LFA1 TRANSFAC yes 118254884
chr1 26615644 26615654 ETV3 JASPAR yes 27631961
chr1 26615644 26615654 ETV6 JASPAR yes 27631962
chr1 26615644 26615654 ETV3 JASPAR yes 118254885
chr1 26615644 26615654 ETV6 JASPAR yes 118254886
chr1 26615646 26615652 ETS1 JASPAR yes 27631963
chr1 26615646 26615652 SPI1 JASPAR yes 27631964
chr1 26615646 26615652 ETS1 JASPAR yes 118254887
chr1 26615646 26615652 SPI1 JASPAR yes 118254888
chr1 26615659 26615662 MYB TRANSFAC yes 27631965
chr1 26615659 26615662 MYB TRANSFAC yes 118254889
chr1 26615682 26615693 FLI1 JASPAR yes 27631966
chr1 26615682 26615693 FLI1 JASPAR yes 118254890
chr1 26615682 26615701 CTCF JASPAR yes 27631967
chr1 26615682 26615701 CTCF JASPAR yes 118254891
chr1 26615683 26615697 SPI1 JASPAR yes 27631968
chr1 26615683 26615697 SPIC JASPAR yes 27631969
chr1 26615683 26615697 SPI1 JASPAR yes 118254892
chr1 26615683 26615697 SPIC JASPAR yes 118254893
chr1 26615686 26615693 SPIB JASPAR yes 27631970
chr1 26615686 26615693 SPIB JASPAR yes 118254894
chr1 26615717 26615731 MTF1 JASPAR yes 27631971
chr1 26615717 26615731 MTF1 JASPAR yes 118254895
chr1 26615749 26615755 PEA3 TRANSFAC yes 27631972
chr1 26615749 26615755 PEA3 TRANSFAC yes 118254896
chr1 26615749 26615760 FLI1 JASPAR yes 27631973
chr1 26615749 26615760 FLI1 JASPAR yes 118254897
chr1 26615760 26615766 NFIC JASPAR yes 27631974
chr1 26615760 26615766 NFIC JASPAR yes 118254898
chr1 26615762 26615774 TAL1 JASPAR yes 27631975
chr1 26615762 26615774 TAL1 JASPAR yes 118254899
chr1 26615810 26615825 AR JASPAR yes 27631976
chr1 26615810 26615825 AR JASPAR yes 118254900
chr1 26615819 26615828 HIC2 JASPAR yes 27631977
chr1 26615819 26615828 HIC2 JASPAR yes 118254901
chr1 26615820 26615841 ZNF263 JASPAR yes 27631978
chr1 26615820 26615841 ZNF263 JASPAR yes 118254902
chr1 26615823 26615844 ZNF263 JASPAR yes 27631979
chr1 26615823 26615844 ZNF263 JASPAR yes 118254903
chr1 26615827 26615837 MZF1 JASPAR yes 27631980
chr1 26615827 26615837 MZF1 JASPAR yes 118254904
chr1 26615843 26615855 PROX1 JASPAR yes 27631981
chr1 26615843 26615855 PROX1 JASPAR yes 118254905
chr1 26615861 26615873 ZBTB7C JASPAR yes 27631982
chr1 26615861 26615873 ZBTB7C JASPAR yes 118254906
chr1 26615862 26615872 ZNF740 JASPAR yes 27631983
chr1 26615862 26615872 ZNF740 JASPAR yes 118254907
chr1 26615874 26615886 TFAP2A JASPAR yes 27631984
chr1 26615874 26615886 TFAP2B JASPAR yes 27631985
chr1 26615874 26615886 TFAP2C JASPAR yes 27631986
chr1 26615874 26615886 TFAP2A JASPAR yes 118254908
chr1 26615874 26615886 TFAP2B JASPAR yes 118254909
chr1 26615874 26615886 TFAP2C JASPAR yes 118254910
chr1 26615874 26615889 TFAP2A JASPAR yes 27631987
chr1 26615874 26615889 TFAP2A JASPAR yes 118254911
chr1 26615888 26615903 TFAP2C JASPAR yes 27631988
chr1 26615888 26615903 TFAP2C JASPAR yes 118254912
chr1 26615892 26615912 PPARG JASPAR yes 27631989
chr1 26615892 26615912 PPARG JASPAR yes 118254913
chr1 26615895 26615909 NR2F1 JASPAR yes 27631990
chr1 26615895 26615909 NR2F1 JASPAR yes 118254914
chr1 26615910 26615924 PLAG1 JASPAR yes 27631991
chr1 26615910 26615924 PLAG1 JASPAR yes 118254915
chr1 26615924 26615943 PAX5 JASPAR yes 27631992
chr1 26615924 26615943 PAX5 JASPAR yes 118254916
chr1 26615947 26615962 FOXA1 JASPAR yes 27631993
chr1 26615947 26615962 FOXA1 JASPAR yes 118254917
chr1 26615951 26615962 FOXA1 JASPAR yes 27631994
chr1 26615951 26615962 FOXA1 JASPAR yes 118254918
chr1 26615954 26615968 TLX1 JASPAR yes 27631995
chr1 26615954 26615968 TLX1 JASPAR yes 118254919
chr1 26615969 26615978 HIC2 JASPAR yes 27631996
chr1 26615969 26615978 HIC2 JASPAR yes 118254920
chr1 26615972 26615976 LFA1 TRANSFAC yes 27631997
chr1 26615972 26615976 LFA1 TRANSFAC yes 118254921
chr1 26615982 26615989 JUN TRANSFAC yes 27631998
chr1 26615982 26615989 JUN TRANSFAC yes 118254922
chr1 26615990 26616010 ESR1 JASPAR yes 27631999
chr1 26615990 26616010 ESR1 JASPAR yes 118254923
SNP sites on vista862[chr1:26615527-26615997]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26615557 rs540021194 T G
SOX10
179246
chr1 26615616 rs4233458 C T no 179247
chr1 26615925 rs72872925 G A
PAX5
179248
Genes possibly regulated by vista862[chr1:26615527-26615997]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26517052 26529459 + CATSPER4 ENSG00000188782.3 26517052 0.92 1.0 362 1525
chr1 26560691 26605299 + CEP85 ENSG00000130695.9 26560691 0.77 1.0 363 45164
chr1 26605667 26608007 + SH3BGRL3 ENSG00000142669.9 26605667 0.69 1.0 364 90140
chr1 26607819 26644854 - UBXN11 ENSG00000158062.16 26644854 0.78 1.0 365 71143
chr1 26644448 26647014 + CD52 ENSG00000169442.4 26644448 0.92 0.83 366 71549
chr1 26648350 26680621 - AIM1L ENSG00000176092.9 26680621 0.94 1.0 367 35376
chr1 26688125 26701013 - ZNF683 ENSG00000176083.13 26701013 0.97 0.0 368 14984
Expression level of Genes
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miRNAs possibly regulated by vista862[chr1:26615527-26615997]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results