EnhancerDB
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  3. vista870[chr1:26683687-26684084]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista870[chr1:26683687-26684084]
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Tissue distribution of vista870
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Transcription factor that possibly regulate vista870[chr1:26683687-26684084]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26683688 26683704 RFX3 JASPAR yes 118255266
chr1 26683688 26683704 RFX5 JASPAR yes 118255267
chr1 26683689 26683708 RFX2 JASPAR yes 118255268
chr1 26683696 26683715 CTCF JASPAR yes 118255269
chr1 26683700 26683721 ZNF263 JASPAR yes 118255270
chr1 26683702 26683708 SP1 TRANSFAC yes 118255271
chr1 26683703 26683717 PLAG1 JASPAR yes 118255272
chr1 26683712 26683722 ZNF740 JASPAR yes 118255273
chr1 26683714 26683735 ZNF263 JASPAR yes 118255274
chr1 26683715 26683721 MZF1 JASPAR yes 118255275
chr1 26683723 26683734 FOS JASPAR yes 118255276
chr1 26683723 26683734 FOSL1 JASPAR yes 118255277
chr1 26683723 26683734 JUND JASPAR yes 118255278
chr1 26683723 26683734 NFE2 JASPAR yes 118255279
chr1 26683724 26683733 JDP2 JASPAR yes 118255280
chr1 26683724 26683735 FOSL2 JASPAR yes 118255281
chr1 26683724 26683735 JUNB JASPAR yes 118255282
chr1 26683724 26683738 JUN JASPAR yes 118255283
chr1 26683725 26683736 BATF JASPAR yes 118255284
chr1 26683730 26683734 YY1 TRANSFAC yes 118255285
chr1 26683750 26683761 E2F6 JASPAR yes 118255286
chr1 26683752 26683760 SP1 TRANSFAC yes 118255287
chr1 26683752 26683762 SP1 JASPAR yes 118255288
chr1 26683754 26683760 MAZ TRANSFAC yes 118255289
chr1 26683758 26683778 ESR1 JASPAR yes 118255290
chr1 26683759 26683763 LFA1 TRANSFAC yes 118255291
chr1 26683782 26683786 LFA1 TRANSFAC yes 118255292
chr1 26683782 26683802 TP63 JASPAR yes 118255293
chr1 26683790 26683803 SMAD2 JASPAR yes 118255294
chr1 26683799 26683814 NR2C2 JASPAR yes 118255295
chr1 26683800 26683814 PLAG1 JASPAR yes 118255296
chr1 26683809 26683819 SP1 JASPAR yes 118255297
chr1 26683811 26683817 MAZ TRANSFAC yes 118255298
chr1 26683828 26683833 SP1 TRANSFAC yes 118255299
chr1 26683829 26683834 SP1 TRANSFAC yes 118255300
chr1 26683829 26683835 SP1 TRANSFAC yes 118255301
chr1 26683830 26683838 SP1 TRANSFAC yes 118255302
chr1 26683830 26683838 WT1 TRANSFAC yes 118255303
chr1 26683832 26683839 SP1 TRANSFAC yes 118255304
chr1 26683832 26683842 SP1 JASPAR yes 118255305
chr1 26683833 26683841 SP1 TRANSFAC yes 118255306
chr1 26683834 26683839 SP1 TRANSFAC yes 118255307
chr1 26683835 26683840 SP1 TRANSFAC yes 118255308
chr1 26683835 26683844 THAP1 JASPAR yes 118255309
chr1 26683838 26683842 LFA1 TRANSFAC yes 118255310
chr1 26683843 26683847 LFA1 TRANSFAC yes 118255311
chr1 26683863 26683875 TFAP2A JASPAR yes 118255312
chr1 26683863 26683875 TFAP2B JASPAR yes 118255313
chr1 26683863 26683875 TFAP2C JASPAR yes 118255314
chr1 26683863 26683877 PLAG1 JASPAR yes 118255315
chr1 26683864 26683884 ESR1 JASPAR yes 118255316
chr1 26683865 26683874 TFAP2A JASPAR yes 118255317
chr1 26683869 26683884 ESR2 JASPAR yes 118255318
chr1 26683870 26683874 LFA1 TRANSFAC yes 118255319
chr1 26683879 26683894 STAT1 JASPAR yes 118255320
chr1 26683881 26683892 STAT3 JASPAR yes 118255321
chr1 26683891 26683911 PPARG JASPAR yes 118255322
chr1 26683904 26683912 EHF JASPAR yes 118255323
chr1 26683904 26683925 ZNF263 JASPAR yes 118255324
chr1 26683906 26683913 SPIB JASPAR yes 118255325
chr1 26683927 26683938 NFE2L2 JASPAR yes 118255326
chr1 26683948 26683957 THAP1 JASPAR yes 118255327
chr1 26683949 26683966 RARA JASPAR yes 118255328
chr1 26683949 26683966 RXRA JASPAR yes 118255329
chr1 26683955 26683959 YY1 TRANSFAC yes 118255330
chr1 26683961 26683981 RREB1 JASPAR yes 118255331
chr1 26683963 26683983 RREB1 JASPAR yes 118255332
chr1 26683964 26683979 RUNX2 JASPAR yes 118255333
chr1 26683965 26683985 RREB1 JASPAR yes 118255334
chr1 26683975 26683985 SP1 JASPAR yes 118255335
chr1 26683987 26683998 NRF1 JASPAR yes 118255336
chr1 26683999 26684011 PKNOX1 JASPAR yes 118255337
chr1 26683999 26684014 SCRT1 JASPAR yes 118255338
chr1 26684000 26684010 ID4 JASPAR yes 118255339
chr1 26684000 26684010 MSC JASPAR yes 118255340
chr1 26684000 26684010 TCF3 JASPAR yes 118255341
chr1 26684001 26684010 SNAI2 JASPAR yes 118255342
chr1 26684002 26684007 USF2 TRANSFAC yes 118255343
chr1 26684012 26684025 DUXA JASPAR yes 118255344
chr1 26684013 26684019 GATA1 TRANSFAC yes 118255345
chr1 26684013 26684021 GATA5 JASPAR yes 118255346
chr1 26684039 26684042 MYB TRANSFAC yes 118255347
chr1 26684044 26684048 LFA1 TRANSFAC yes 118255348
chr1 26684049 26684063 FOXF2 JASPAR yes 118255349
chr1 26684052 26684064 FOXI1 JASPAR yes 118255350
chr1 26684054 26684062 FOXG1 JASPAR yes 118255351
chr1 26684054 26684074 TBX19 JASPAR yes 118255352
chr1 26684056 26684072 T JASPAR yes 118255353
chr1 26684059 26684073 PAX6 JASPAR yes 118255354
SNP sites on vista870[chr1:26683687-26684084]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26683710 rs6657386 T C
CTCF PLAG1 ZNF263
179579
chr1 26683770 rs11247930 G A
ESR1
179580
chr1 26683781 rs145432085 T C no 179581
chr1 26683817 rs147726176 G A
MAZ SP1
179582
chr1 26683839 rs149183786 G A
LFA1 SP1 THAP1
179583
chr1 26684037 rs114270892 G A no 179584
Genes possibly regulated by vista870[chr1:26683687-26684084]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26605667 26608007 + SH3BGRL3 ENSG00000142669.9 26605667 0.69 1.0 364 21980
chr1 26607819 26644854 - UBXN11 ENSG00000158062.16 26644854 0.78 1.0 365 61167
chr1 26644448 26647014 + CD52 ENSG00000169442.4 26644448 0.92 0.83 366 60761
chr1 26648350 26680621 - AIM1L ENSG00000176092.9 26680621 0.94 1.0 367 96934
chr1 26688125 26701013 - ZNF683 ENSG00000176083.13 26701013 0.97 0.0 368 83071
chr1 26737269 26756213 + LIN28A ENSG00000131914.6 26737269 0.95 1.0 369 46815
chr1 26758773 26797785 + DHDDS ENSG00000117682.12 26758773 0.67 1.0 370 25311
Expression level of Genes
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miRNAs possibly regulated by vista870[chr1:26683687-26684084]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results