EnhancerDB
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  3. vista873[chr1:26739065-26739644]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista873[chr1:26739065-26739644]
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Tissue distribution of vista873
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Transcription factor that possibly regulate vista873[chr1:26739065-26739644]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 26739091 26739100 PITX3 JASPAR yes 118255452
chr1 26739091 26739101 GSC2 JASPAR yes 118255453
chr1 26739091 26739101 GSC JASPAR yes 118255454
chr1 26739092 26739100 OTX1 JASPAR yes 118255455
chr1 26739126 26739130 LFA1 TRANSFAC yes 118255456
chr1 26739131 26739137 MAZ TRANSFAC yes 118255457
chr1 26739139 26739146 NKX3-1 JASPAR yes 118255458
chr1 26739154 26739174 RREB1 JASPAR yes 118255459
chr1 26739162 26739183 ZNF263 JASPAR yes 118255460
chr1 26739164 26739172 TBX5 JASPAR yes 118255461
chr1 26739164 26739185 ZNF263 JASPAR yes 118255462
chr1 26739167 26739188 ZNF263 JASPAR yes 118255463
chr1 26739168 26739178 ZNF740 JASPAR yes 118255464
chr1 26739170 26739179 SP1 TRANSFAC yes 118255465
chr1 26739170 26739180 SP1 JASPAR yes 118255466
chr1 26739170 26739191 ZNF263 JASPAR yes 118255467
chr1 26739171 26739180 SP1 TRANSFAC yes 118255468
chr1 26739172 26739178 MAZ TRANSFAC yes 118255469
chr1 26739172 26739187 PRDM1 JASPAR yes 118255470
chr1 26739173 26739183 MZF1 JASPAR yes 118255471
chr1 26739176 26739197 ZNF263 JASPAR yes 118255472
chr1 26739179 26739193 SPI1 JASPAR yes 118255473
chr1 26739180 26739201 ZNF263 JASPAR yes 118255474
chr1 26739183 26739204 ZNF263 JASPAR yes 118255475
chr1 26739184 26739191 PEA3 TRANSFAC yes 118255476
chr1 26739191 26739196 TFAP2A TRANSFAC yes 118255477
chr1 26739191 26739197 MZF1 JASPAR yes 118255478
chr1 26739192 26739202 GSC2 JASPAR yes 118255479
chr1 26739192 26739202 GSC JASPAR yes 118255480
chr1 26739192 26739209 ZNF410 JASPAR yes 118255481
chr1 26739193 26739201 OTX1 JASPAR yes 118255482
chr1 26739193 26739201 OTX2 JASPAR yes 118255483
chr1 26739193 26739201 RHOXF1 JASPAR yes 118255484
chr1 26739193 26739202 PITX3 JASPAR yes 118255485
chr1 26739193 26739207 RXRG JASPAR yes 118255486
chr1 26739207 26739222 TFAP2C JASPAR yes 118255487
chr1 26739208 26739220 TFAP2A JASPAR yes 118255488
chr1 26739208 26739220 TFAP2C JASPAR yes 118255489
chr1 26739218 26739224 YY1 JASPAR yes 118255490
chr1 26739231 26739240 SP1 TRANSFAC yes 118255491
chr1 26739231 26739241 SP1 JASPAR yes 118255492
chr1 26739231 26739252 ZNF263 JASPAR yes 118255493
chr1 26739233 26739239 MAZ TRANSFAC yes 118255494
chr1 26739234 26739244 MZF1 JASPAR yes 118255495
chr1 26739341 26739346 TFAP2A TRANSFAC yes 118255496
chr1 26739341 26739347 MZF1 JASPAR yes 118255497
chr1 26739350 26739359 NKX3-2 JASPAR yes 118255498
chr1 26739363 26739368 SP1 TRANSFAC yes 118255499
chr1 26739363 26739377 PLAG1 JASPAR yes 118255500
chr1 26739363 26739381 RARA JASPAR yes 118255501
chr1 26739373 26739377 ESR1 TRANSFAC yes 118255502
chr1 26739383 26739392 NKX2-8 JASPAR yes 118255503
chr1 26739388 26739400 TAL1 JASPAR yes 118255504
chr1 26739389 26739402 ZBTB18 JASPAR yes 118255505
chr1 26739390 26739400 NEUROG2 JASPAR yes 118255506
chr1 26739396 26739402 NFIC JASPAR yes 118255507
chr1 26739416 26739421 GATA2 JASPAR yes 118255508
chr1 26739426 26739432 NFE2 TRANSFAC yes 118255509
chr1 26739449 26739463 PLAG1 JASPAR yes 118255510
chr1 26739455 26739465 ZNF740 JASPAR yes 118255511
chr1 26739462 26739466 YY1 TRANSFAC yes 118255512
chr1 26739494 26739515 ZNF263 JASPAR yes 118255513
chr1 26739504 26739508 NFE TRANSFAC yes 118255514
chr1 26739508 26739521 POU2F2 JASPAR yes 118255515
chr1 26739508 26739522 POU1F1 JASPAR yes 118255516
chr1 26739509 26739520 FOXB1 JASPAR yes 118255517
chr1 26739509 26739521 POU3F1 JASPAR yes 118255518
chr1 26739509 26739521 POU3F2 JASPAR yes 118255519
chr1 26739509 26739522 POU3F3 JASPAR yes 118255520
chr1 26739510 26739514 YY1 TRANSFAC yes 118255521
chr1 26739510 26739522 POU2F1 JASPAR yes 118255522
chr1 26739511 26739520 POU3F4 JASPAR yes 118255523
chr1 26739511 26739520 POU5F1B JASPAR yes 118255524
chr1 26739512 26739520 FOXL1 JASPAR yes 118255525
chr1 26739529 26739532 MYB TRANSFAC yes 118255526
chr1 26739532 26739545 ELF1 JASPAR yes 118255527
chr1 26739534 26739545 ETV2 JASPAR yes 118255528
chr1 26739535 26739545 ELK1 JASPAR yes 118255529
chr1 26739535 26739545 ELK3 JASPAR yes 118255530
chr1 26739535 26739545 ERF JASPAR yes 118255531
chr1 26739535 26739545 ERG JASPAR yes 118255532
chr1 26739535 26739545 ETS1 JASPAR yes 118255533
chr1 26739535 26739545 ETV1 JASPAR yes 118255534
chr1 26739535 26739545 ETV3 JASPAR yes 118255535
chr1 26739535 26739545 ETV4 JASPAR yes 118255536
chr1 26739535 26739545 ETV6 JASPAR yes 118255537
chr1 26739535 26739545 FEV JASPAR yes 118255538
chr1 26739535 26739545 FLI1 JASPAR yes 118255539
chr1 26739535 26739546 ELK4 JASPAR yes 118255540
chr1 26739535 26739546 FLI1 JASPAR yes 118255541
chr1 26739536 26739544 EHF JASPAR yes 118255542
chr1 26739536 26739544 FEV JASPAR yes 118255543
chr1 26739537 26739544 SPI1 JASPAR yes 118255544
chr1 26739567 26739585 SRF JASPAR yes 118255545
chr1 26739591 26739602 HOXA10 JASPAR yes 118255546
chr1 26739592 26739601 CDX1 JASPAR yes 118255547
chr1 26739592 26739603 CDX2 JASPAR yes 118255548
chr1 26739596 26739607 STAT1 JASPAR yes 118255549
SNP sites on vista873[chr1:26739065-26739644]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 26739132 rs185470685 G A
MAZ
180202
chr1 26739504 rs542878876 T A
NFE ZNF263
180203
chr1 26739505 rs559543373 C A,G
NFE ZNF263
180204
Genes possibly regulated by vista873[chr1:26739065-26739644]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 26607819 26644854 - UBXN11 ENSG00000158062.16 26644854 0.78 1.0 365 5789
chr1 26644448 26647014 + CD52 ENSG00000169442.4 26644448 0.92 0.83 366 5383
chr1 26648350 26680621 - AIM1L ENSG00000176092.9 26680621 0.94 1.0 367 41556
chr1 26688125 26701013 - ZNF683 ENSG00000176083.13 26701013 0.97 0.0 368 61948
chr1 26737269 26756213 + LIN28A ENSG00000131914.6 26737269 0.95 1.0 369 98204
chr1 26758773 26797785 + DHDDS ENSG00000117682.12 26758773 0.67 1.0 370 80871
chr1 26798941 26802463 + HMGN2 ENSG00000198830.6 26798941 0.89 0.99 371 40703
Expression level of Genes
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miRNAs possibly regulated by vista873[chr1:26739065-26739644]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results