EnhancerDB
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  3. vista88[chr1:3077832-3078221]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista88[chr1:3077832-3078221]
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Tissue distribution of vista88
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Transcription factor that possibly regulate vista88[chr1:3077832-3078221]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3077815 3077835 RREB1 JASPAR yes 26261836
chr1 3077815 3077835 RREB1 JASPAR yes 118217599
chr1 3077817 3077837 RREB1 JASPAR yes 26261838
chr1 3077817 3077837 RREB1 JASPAR yes 118217600
chr1 3077856 3077866 HOXA13 JASPAR yes 26261839
chr1 3077856 3077866 HOXB13 JASPAR yes 26261840
chr1 3077856 3077866 HOXD13 JASPAR yes 26261841
chr1 3077856 3077866 HOXA13 JASPAR yes 118217601
chr1 3077856 3077866 HOXB13 JASPAR yes 118217602
chr1 3077856 3077866 HOXD13 JASPAR yes 118217603
chr1 3077856 3077871 STAT1 JASPAR yes 26261842
chr1 3077856 3077871 STAT1 JASPAR yes 118217604
chr1 3077858 3077869 STAT1 JASPAR yes 26261843
chr1 3077858 3077869 STAT3 JASPAR yes 26261844
chr1 3077858 3077869 STAT1 JASPAR yes 118217605
chr1 3077858 3077869 STAT3 JASPAR yes 118217606
chr1 3077861 3077871 NFATC3 JASPAR yes 26261845
chr1 3077861 3077871 NFATC3 JASPAR yes 118217607
chr1 3077885 3077891 MAZ TRANSFAC yes 26261846
chr1 3077885 3077891 MAZ TRANSFAC yes 118217608
chr1 3077894 3077900 LEF1 TRANSFAC yes 26261847
chr1 3077894 3077900 SOX10 JASPAR yes 26261848
chr1 3077894 3077900 LEF1 TRANSFAC yes 118217609
chr1 3077894 3077900 SOX10 JASPAR yes 118217610
chr1 3077905 3077909 ESR1 TRANSFAC yes 26261849
chr1 3077905 3077909 ESR1 TRANSFAC yes 118217611
chr1 3077932 3077945 NFKB1 JASPAR yes 26261850
chr1 3077932 3077945 NFKB2 JASPAR yes 26261851
chr1 3077932 3077945 NFKB1 JASPAR yes 118217612
chr1 3077932 3077945 NFKB2 JASPAR yes 118217613
chr1 3077960 3077970 REL JASPAR yes 26261852
chr1 3077960 3077970 REL JASPAR yes 118217614
chr1 3077962 3077973 FLI1 JASPAR yes 26261853
chr1 3077962 3077973 FLI1 JASPAR yes 118217615
chr1 3077963 3077967 YY1 TRANSFAC yes 26261854
chr1 3077963 3077967 YY1 TRANSFAC yes 118217616
chr1 3077963 3077973 ETV6 JASPAR yes 26261855
chr1 3077963 3077973 ETV6 JASPAR yes 118217617
chr1 3077963 3077976 ELF1 JASPAR yes 26261856
chr1 3077963 3077976 ELF1 JASPAR yes 118217618
chr1 3077963 3077984 ZNF263 JASPAR yes 26261857
chr1 3077963 3077984 ZNF263 JASPAR yes 118217619
chr1 3077964 3077972 FEV JASPAR yes 26261858
chr1 3077964 3077972 FEV JASPAR yes 118217620
chr1 3077966 3077973 SPIB JASPAR yes 26261859
chr1 3077966 3077973 SPIB JASPAR yes 118217621
chr1 3077966 3077987 ZNF263 JASPAR yes 26261860
chr1 3077966 3077987 ZNF263 JASPAR yes 118217622
chr1 3077988 3077998 EVX1 JASPAR yes 26261861
chr1 3077988 3077998 EVX2 JASPAR yes 26261862
chr1 3077988 3077998 LHX6 JASPAR yes 26261863
chr1 3077988 3077998 EVX1 JASPAR yes 118217623
chr1 3077988 3077998 EVX2 JASPAR yes 118217624
chr1 3077988 3077998 LHX6 JASPAR yes 118217625
chr1 3078003 3078007 LFA1 TRANSFAC yes 26261864
chr1 3078003 3078007 LFA1 TRANSFAC yes 118217626
chr1 3078008 3078018 SREBF1 JASPAR yes 26261865
chr1 3078008 3078018 SREBF2 JASPAR yes 26261866
chr1 3078008 3078018 SREBF1 JASPAR yes 118217627
chr1 3078008 3078018 SREBF2 JASPAR yes 118217628
chr1 3078019 3078033 GLIS2 JASPAR yes 26261867
chr1 3078019 3078033 GLIS2 JASPAR yes 118217629
chr1 3078036 3078047 YY2 JASPAR yes 26261868
chr1 3078036 3078047 YY2 JASPAR yes 118217630
chr1 3078036 3078052 E2F2 JASPAR yes 26261869
chr1 3078036 3078052 E2F2 JASPAR yes 118217631
chr1 3078043 3078047 ESR1 TRANSFAC yes 26261870
chr1 3078043 3078047 ESR1 TRANSFAC yes 118217632
chr1 3078046 3078050 YY1 TRANSFAC yes 26261871
chr1 3078046 3078050 YY1 TRANSFAC yes 118217633
chr1 3078051 3078058 NFATC2 JASPAR yes 26261872
chr1 3078051 3078058 NFATC2 JASPAR yes 118217634
chr1 3078061 3078067 SOX10 JASPAR yes 26261873
chr1 3078061 3078067 SOX10 JASPAR yes 118217635
chr1 3078065 3078071 ZNF354C JASPAR yes 26261874
chr1 3078065 3078071 ZNF354C JASPAR yes 118217636
chr1 3078081 3078086 TFAP2A TRANSFAC yes 26261875
chr1 3078081 3078086 TFAP2A TRANSFAC yes 118217637
chr1 3078081 3078087 MZF1 JASPAR yes 26261876
chr1 3078081 3078087 MZF1 JASPAR yes 118217638
chr1 3078100 3078104 TEAD2 TRANSFAC yes 26261877
chr1 3078100 3078104 TEAD2 TRANSFAC yes 118217639
chr1 3078104 3078123 RFX2 JASPAR yes 26261878
chr1 3078104 3078123 RFX2 JASPAR yes 118217640
chr1 3078106 3078120 POU1F1 JASPAR yes 26261879
chr1 3078106 3078120 POU1F1 JASPAR yes 118217641
chr1 3078107 3078119 POU3F1 JASPAR yes 26261880
chr1 3078107 3078119 POU3F2 JASPAR yes 26261881
chr1 3078107 3078119 POU3F1 JASPAR yes 118217642
chr1 3078107 3078119 POU3F2 JASPAR yes 118217643
chr1 3078108 3078112 YY1 TRANSFAC yes 26261882
chr1 3078108 3078112 YY1 TRANSFAC yes 118217644
chr1 3078108 3078120 POU2F1 JASPAR yes 26261883
chr1 3078108 3078120 POU2F1 JASPAR yes 118217645
chr1 3078108 3078124 RFX2 JASPAR yes 26261884
chr1 3078108 3078124 RFX3 JASPAR yes 26261885
chr1 3078108 3078124 RFX4 JASPAR yes 26261886
chr1 3078108 3078124 RFX5 JASPAR yes 26261887
chr1 3078108 3078124 RFX2 JASPAR yes 118217646
chr1 3078108 3078124 RFX3 JASPAR yes 118217647
chr1 3078108 3078124 RFX4 JASPAR yes 118217648
chr1 3078108 3078124 RFX5 JASPAR yes 118217649
chr1 3078109 3078118 POU3F4 JASPAR yes 26261888
chr1 3078109 3078118 POU5F1B JASPAR yes 26261889
chr1 3078109 3078118 POU3F4 JASPAR yes 118217650
chr1 3078109 3078118 POU5F1B JASPAR yes 118217651
chr1 3078109 3078128 RFX2 JASPAR yes 26261890
chr1 3078109 3078128 RFX2 JASPAR yes 118217652
chr1 3078122 3078126 NFE TRANSFAC yes 26261891
chr1 3078122 3078126 NFE TRANSFAC yes 118217653
chr1 3078124 3078134 POU6F2 JASPAR yes 26261892
chr1 3078124 3078134 POU6F2 JASPAR yes 118217654
chr1 3078128 3078132 YY1 TRANSFAC yes 26261893
chr1 3078128 3078132 YY1 TRANSFAC yes 118217655
chr1 3078160 3078174 TLX1 JASPAR yes 26261894
chr1 3078160 3078174 TLX1 JASPAR yes 118217656
chr1 3078184 3078194 GSX2 JASPAR yes 26261895
chr1 3078184 3078194 GSX2 JASPAR yes 118217657
chr1 3078185 3078193 BARX1 JASPAR yes 26261896
chr1 3078185 3078193 BARX1 JASPAR yes 118217658
chr1 3078200 3078209 THAP1 JASPAR yes 26261897
chr1 3078200 3078209 THAP1 JASPAR yes 118217659
chr1 3078201 3078214 TFAP2A JASPAR yes 26261898
chr1 3078201 3078214 TFAP2C JASPAR yes 26261899
chr1 3078201 3078214 TFAP2A JASPAR yes 118217660
chr1 3078201 3078214 TFAP2C JASPAR yes 118217661
chr1 3078202 3078209 SP1 TRANSFAC yes 26261900
chr1 3078202 3078209 SP1 TRANSFAC yes 118217662
chr1 3078204 3078209 SP1 TRANSFAC yes 26261901
chr1 3078204 3078209 SP1 TRANSFAC yes 118217663
SNP sites on vista88[chr1:3077832-3078221]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3077836 rs149846314 G T
RREB1
18007
Genes possibly regulated by vista88[chr1:3077832-3078221]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 2985732 3355185 + PRDM16 ENSG00000142611.12 2985732 0.87 1.0 74 7900
Expression level of Genes
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miRNAs possibly regulated by vista88[chr1:3077832-3078221]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results