EnhancerDB
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  3. vista888[chr1:27165490-27165816]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista888[chr1:27165490-27165816]
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Tissue distribution of vista888
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Transcription factor that possibly regulate vista888[chr1:27165490-27165816]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27165492 27165507 HNF4G JASPAR yes 27660203
chr1 27165492 27165507 NR2C2 JASPAR yes 27660204
chr1 27165492 27165507 HNF4G JASPAR yes 118256424
chr1 27165492 27165507 NR2C2 JASPAR yes 118256425
chr1 27165493 27165507 RXRB JASPAR yes 27660205
chr1 27165493 27165507 RXRG JASPAR yes 27660206
chr1 27165493 27165507 RXRB JASPAR yes 118256426
chr1 27165493 27165507 RXRG JASPAR yes 118256427
chr1 27165493 27165508 HNF4A JASPAR yes 27660207
chr1 27165493 27165508 HNF4A JASPAR yes 118256428
chr1 27165494 27165511 RXRA JASPAR yes 27660208
chr1 27165494 27165511 RXRA JASPAR yes 118256429
chr1 27165495 27165499 LFA1 TRANSFAC yes 27660209
chr1 27165495 27165499 LFA1 TRANSFAC yes 118256430
chr1 27165502 27165506 LFA1 TRANSFAC yes 27660210
chr1 27165502 27165506 LFA1 TRANSFAC yes 118256431
chr1 27165515 27165526 STAT3 JASPAR yes 27660211
chr1 27165515 27165526 STAT3 JASPAR yes 118256432
chr1 27165524 27165536 TFAP2A JASPAR yes 27660212
chr1 27165524 27165536 TFAP2A JASPAR yes 118256433
chr1 27165535 27165550 TFAP2A JASPAR yes 27660213
chr1 27165535 27165550 TFAP2C JASPAR yes 27660214
chr1 27165535 27165550 TFAP2A JASPAR yes 118256434
chr1 27165535 27165550 TFAP2C JASPAR yes 118256435
chr1 27165536 27165545 TFAP2A JASPAR yes 27660215
chr1 27165536 27165545 TFAP2A JASPAR yes 118256436
chr1 27165536 27165547 EBF1 JASPAR yes 27660216
chr1 27165536 27165547 EBF1 JASPAR yes 118256437
chr1 27165540 27165545 TFAP2A TRANSFAC yes 27660217
chr1 27165540 27165545 TFAP2A TRANSFAC yes 118256438
chr1 27165540 27165546 MZF1 JASPAR yes 27660218
chr1 27165540 27165546 MZF1 JASPAR yes 118256439
chr1 27165541 27165552 NFKB1 JASPAR yes 27660219
chr1 27165541 27165552 NFKB1 JASPAR yes 118256440
chr1 27165542 27165552 NFKB1 JASPAR yes 27660220
chr1 27165542 27165552 REL JASPAR yes 27660221
chr1 27165542 27165552 NFKB1 JASPAR yes 118256441
chr1 27165542 27165552 REL JASPAR yes 118256442
chr1 27165560 27165573 TFAP2B JASPAR yes 27660222
chr1 27165560 27165573 TFAP2B JASPAR yes 118256443
chr1 27165574 27165584 RUNX3 JASPAR yes 27660223
chr1 27165574 27165584 RUNX3 JASPAR yes 118256444
chr1 27165574 27165585 RUNX1 JASPAR yes 27660224
chr1 27165574 27165585 RUNX1 JASPAR yes 118256445
chr1 27165609 27165613 NFE TRANSFAC yes 27660225
chr1 27165609 27165613 NFE TRANSFAC yes 118256446
chr1 27165618 27165623 SP1 TRANSFAC yes 27660226
chr1 27165618 27165623 SP1 TRANSFAC yes 118256447
chr1 27165620 27165625 TFAP2A TRANSFAC yes 27660227
chr1 27165620 27165625 TFAP2A TRANSFAC yes 118256448
chr1 27165620 27165626 MZF1 JASPAR yes 27660228
chr1 27165620 27165626 MZF1 JASPAR yes 118256449
chr1 27165621 27165634 NFKB2 JASPAR yes 27660229
chr1 27165621 27165634 NFKB2 JASPAR yes 118256450
chr1 27165622 27165632 NFKB1 JASPAR yes 27660230
chr1 27165622 27165632 RELA JASPAR yes 27660231
chr1 27165622 27165632 REL JASPAR yes 27660232
chr1 27165622 27165632 NFKB1 JASPAR yes 118256451
chr1 27165622 27165632 RELA JASPAR yes 118256452
chr1 27165622 27165632 REL JASPAR yes 118256453
chr1 27165622 27165633 NFKB1 JASPAR yes 27660233
chr1 27165622 27165633 NFKB1 JASPAR yes 118256454
chr1 27165624 27165634 TEAD4 JASPAR yes 27660234
chr1 27165624 27165634 TEAD4 JASPAR yes 118256455
chr1 27165628 27165633 ETS2 TRANSFAC yes 27660235
chr1 27165628 27165633 ETS2 TRANSFAC yes 118256456
chr1 27165633 27165642 THAP1 JASPAR yes 27660236
chr1 27165633 27165642 THAP1 JASPAR yes 118256457
chr1 27165663 27165684 IRF1 JASPAR yes 27660237
chr1 27165663 27165684 IRF1 JASPAR yes 118256458
chr1 27165668 27165686 IRF2 JASPAR yes 27660238
chr1 27165668 27165686 IRF2 JASPAR yes 118256459
chr1 27165669 27165690 IRF1 JASPAR yes 27660239
chr1 27165669 27165690 IRF1 JASPAR yes 118256460
chr1 27165678 27165682 YY1 TRANSFAC yes 27660240
chr1 27165678 27165682 YY1 TRANSFAC yes 118256461
chr1 27165696 27165708 IRF1 JASPAR yes 27660241
chr1 27165696 27165708 IRF1 JASPAR yes 118256462
chr1 27165706 27165717 STAT3 JASPAR yes 27660242
chr1 27165706 27165717 STAT3 JASPAR yes 118256463
chr1 27165707 27165720 TFAP2A JASPAR yes 27660243
chr1 27165707 27165720 TFAP2B JASPAR yes 27660244
chr1 27165707 27165720 TFAP2C JASPAR yes 27660245
chr1 27165707 27165720 TFAP2A JASPAR yes 118256464
chr1 27165707 27165720 TFAP2B JASPAR yes 118256465
chr1 27165707 27165720 TFAP2C JASPAR yes 118256466
chr1 27165715 27165730 ZIC3 JASPAR yes 27660246
chr1 27165715 27165730 ZIC4 JASPAR yes 27660247
chr1 27165715 27165730 ZIC3 JASPAR yes 118256467
chr1 27165715 27165730 ZIC4 JASPAR yes 118256468
chr1 27165716 27165730 ZIC1 JASPAR yes 27660248
chr1 27165716 27165730 ZIC1 JASPAR yes 118256469
chr1 27165739 27165755 E2F2 JASPAR yes 27660249
chr1 27165739 27165755 E2F2 JASPAR yes 118256470
chr1 27165743 27165747 LFA1 TRANSFAC yes 27660250
chr1 27165743 27165747 LFA1 TRANSFAC yes 118256471
chr1 27165759 27165764 ETS2 TRANSFAC yes 27660251
chr1 27165759 27165764 ETS2 TRANSFAC yes 118256472
chr1 27165803 27165818 TFAP2A JASPAR yes 27660252
chr1 27165803 27165818 TFAP2C JASPAR yes 27660253
chr1 27165803 27165818 TFAP2A JASPAR yes 118256473
chr1 27165803 27165818 TFAP2C JASPAR yes 118256474
chr1 27165805 27165820 TFAP2A JASPAR yes 27660254
chr1 27165805 27165820 TFAP2C JASPAR yes 27660255
chr1 27165805 27165820 TFAP2A JASPAR yes 118256475
chr1 27165805 27165820 TFAP2C JASPAR yes 118256476
chr1 27165806 27165818 TFAP2A JASPAR yes 27660256
chr1 27165806 27165818 TFAP2B JASPAR yes 27660257
chr1 27165806 27165818 TFAP2C JASPAR yes 27660258
chr1 27165806 27165818 TFAP2A JASPAR yes 118256477
chr1 27165806 27165818 TFAP2B JASPAR yes 118256478
chr1 27165806 27165818 TFAP2C JASPAR yes 118256479
chr1 27165810 27165819 THAP1 JASPAR yes 27660259
chr1 27165810 27165819 THAP1 JASPAR yes 118256480
chr1 27165813 27165817 LFA1 TRANSFAC yes 27660260
chr1 27165813 27165817 LFA1 TRANSFAC yes 118256481
SNP sites on vista888[chr1:27165490-27165816]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27165493 rs113287499 G A
HNF4A HNF4G NR2C2 RXRB RXRG
182470
chr1 27165499 rs368853407 C G,T
HNF4A HNF4G LFA1 NR2C2 RXRA RXRB RXRG
182471
chr1 27165641 rs539153722 C T
THAP1
182472
chr1 27165675 rs111463482 G A
IRF1 IRF2
182473
chr1 27165766 rs371847411 A G no 182474
Genes possibly regulated by vista888[chr1:27165490-27165816]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27113963 27124889 + PIGV ENSG00000060642.6 27113963 0.61 1.0 374 48473
chr1 27153201 27184093 + ZDHHC18 ENSG00000204160.7 27153201 0.75 1.0 375 87711
chr1 27189633 27190947 + SFN ENSG00000175793.10 27189633 0.98 1.0 376 76183
chr1 27202624 27216788 - GPN2 ENSG00000142751.10 27216788 0.72 1.0 377 49028
chr1 27216979 27226957 - GPATCH3 ENSG00000198746.8 27226957 0.52 0.99 378 38859
chr1 27226729 27273353 + NUDC ENSG00000090273.9 27226729 0.65 0.99 379 39087
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 25359
Expression level of Genes
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miRNAs possibly regulated by vista888[chr1:27165490-27165816]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results