EnhancerDB
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  3. vista889[chr1:27175784-27176273]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista889[chr1:27175784-27176273]
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Tissue distribution of vista889
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Transcription factor that possibly regulate vista889[chr1:27175784-27176273]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27175469 27176145 NR3C1 UCSC Txn Factor no Conserved 107802557
chr1 27175783 27175804 ZNF263 JASPAR yes 27661231
chr1 27175783 27175804 ZNF263 JASPAR yes 118256482
chr1 27175784 27175801 RXRA JASPAR yes 27661232
chr1 27175784 27175801 RXRA JASPAR yes 118256483
chr1 27175785 27175795 SP1 JASPAR yes 27661233
chr1 27175785 27175795 SP1 JASPAR yes 118256484
chr1 27175785 27175804 REST JASPAR yes 27661234
chr1 27175785 27175804 REST JASPAR yes 118256485
chr1 27175797 27175808 EBF1 JASPAR yes 27661235
chr1 27175797 27175808 EBF1 JASPAR yes 118256486
chr1 27175823 27175827 LFA1 TRANSFAC yes 27661236
chr1 27175823 27175827 LFA1 TRANSFAC yes 118256487
chr1 27175850 27175864 PAX6 JASPAR yes 27661237
chr1 27175850 27175864 PAX6 JASPAR yes 118256488
chr1 27175870 27175879 ZEB1 JASPAR yes 27661238
chr1 27175870 27175879 ZEB1 JASPAR yes 118256489
chr1 27175873 27175883 SREBF1 JASPAR yes 27661239
chr1 27175873 27175883 SREBF1 JASPAR yes 118256490
chr1 27175888 27175899 NFE2L2 JASPAR yes 27661240
chr1 27175888 27175899 NFE2L2 JASPAR yes 118256491
chr1 27175889 27175908 REST JASPAR yes 27661241
chr1 27175889 27175908 REST JASPAR yes 118256492
chr1 27175898 27175913 RFX5 JASPAR yes 27661242
chr1 27175898 27175913 RFX5 JASPAR yes 118256493
chr1 27175908 27175912 LFA1 TRANSFAC yes 27661243
chr1 27175908 27175912 LFA1 TRANSFAC yes 118256494
chr1 27175909 27175924 JUND JASPAR yes 27661244
chr1 27175909 27175924 JUND JASPAR yes 118256495
chr1 27175912 27175927 JUND JASPAR yes 27661245
chr1 27175912 27175927 JUND JASPAR yes 118256496
chr1 27175913 27175926 JUN JASPAR yes 27661246
chr1 27175913 27175926 JUN JASPAR yes 118256497
chr1 27175914 27175921 JUN TRANSFAC yes 27661247
chr1 27175914 27175921 JUN TRANSFAC yes 118256498
chr1 27175959 27175972 NFKB2 JASPAR yes 27661248
chr1 27175959 27175972 NFKB2 JASPAR yes 118256499
chr1 27175961 27175971 NFKB1 JASPAR yes 27661249
chr1 27175961 27175971 NFKB1 JASPAR yes 118256500
chr1 27175961 27175972 NFKB1 JASPAR yes 27661250
chr1 27175961 27175972 NFKB1 JASPAR yes 118256501
chr1 27175964 27175974 SP1 JASPAR yes 27661251
chr1 27175964 27175974 ZNF740 JASPAR yes 27661252
chr1 27175964 27175974 SP1 JASPAR yes 118256502
chr1 27175964 27175974 ZNF740 JASPAR yes 118256503
chr1 27175966 27175976 ZNF740 JASPAR yes 27661253
chr1 27175966 27175976 ZNF740 JASPAR yes 118256504
chr1 27175966 27175980 GLIS2 JASPAR yes 27661254
chr1 27175966 27175980 GLIS2 JASPAR yes 118256505
chr1 27175972 27175986 ATF7 JASPAR yes 27661255
chr1 27175972 27175986 ATF7 JASPAR yes 118256506
chr1 27175973 27175985 JDP2 JASPAR yes 27661256
chr1 27175973 27175985 JDP2 JASPAR yes 118256507
chr1 27175987 27175999 INSM1 JASPAR yes 27661257
chr1 27175987 27175999 INSM1 JASPAR yes 118256508
chr1 27175991 27176005 JUN JASPAR yes 27661258
chr1 27175991 27176005 JUN JASPAR yes 118256509
chr1 27175994 27176005 FOSL2 JASPAR yes 27661259
chr1 27175994 27176005 JUNB JASPAR yes 27661260
chr1 27175994 27176005 FOSL2 JASPAR yes 118256510
chr1 27175994 27176005 JUNB JASPAR yes 118256511
chr1 27175995 27176006 FOS JASPAR yes 27661261
chr1 27175995 27176006 FOSL1 JASPAR yes 27661262
chr1 27175995 27176006 JUND JASPAR yes 27661263
chr1 27175995 27176006 FOS JASPAR yes 118256512
chr1 27175995 27176006 FOSL1 JASPAR yes 118256513
chr1 27175995 27176006 JUND JASPAR yes 118256514
chr1 27175996 27176003 JUN TRANSFAC yes 27661264
chr1 27175996 27176003 JUN TRANSFAC yes 118256515
chr1 27176003 27176012 HIC2 JASPAR yes 27661265
chr1 27176003 27176012 HIC2 JASPAR yes 118256516
chr1 27176006 27176010 LFA1 TRANSFAC yes 27661266
chr1 27176006 27176010 LFA1 TRANSFAC yes 118256517
chr1 27176018 27176024 MZF1 JASPAR yes 27661267
chr1 27176018 27176024 MZF1 JASPAR yes 118256518
chr1 27176029 27176035 NFE2 TRANSFAC yes 27661268
chr1 27176029 27176035 NFE2 TRANSFAC yes 118256519
chr1 27176032 27176038 SP1 TRANSFAC yes 27661269
chr1 27176032 27176038 SP1 TRANSFAC yes 118256520
chr1 27176032 27176042 SP1 JASPAR yes 27661270
chr1 27176032 27176042 SP1 JASPAR yes 118256521
chr1 27176034 27176039 SP1 TRANSFAC yes 27661271
chr1 27176034 27176039 SP1 TRANSFAC yes 118256522
chr1 27176043 27176058 HNF4A JASPAR yes 27661272
chr1 27176043 27176058 HNF4A JASPAR yes 118256523
chr1 27176046 27176052 TCF4 TRANSFAC yes 27661273
chr1 27176046 27176052 TCF4 TRANSFAC yes 118256524
chr1 27176048 27176059 ESRRA JASPAR yes 27661274
chr1 27176048 27176059 ESRRA JASPAR yes 118256525
chr1 27176052 27176056 LFA1 TRANSFAC yes 27661275
chr1 27176052 27176056 LFA1 TRANSFAC yes 118256526
chr1 27176056 27176071 TP53 JASPAR yes 27661276
chr1 27176056 27176071 TP53 JASPAR yes 118256527
chr1 27176062 27176071 NFIX JASPAR yes 27661277
chr1 27176062 27176071 NFIX JASPAR yes 118256528
chr1 27176063 27176069 NFIC JASPAR yes 27661278
chr1 27176063 27176069 NFIC JASPAR yes 118256529
chr1 27176063 27176077 TLX1 JASPAR yes 27661279
chr1 27176063 27176077 TLX1 JASPAR yes 118256530
chr1 27176088 27176102 RORA JASPAR yes 27661280
chr1 27176088 27176102 RORA JASPAR yes 118256531
chr1 27176089 27176099 RORA JASPAR yes 27661281
chr1 27176089 27176099 RORA JASPAR yes 118256532
chr1 27176090 27176106 ZNF143 JASPAR yes 27661282
chr1 27176090 27176106 ZNF143 JASPAR yes 118256533
chr1 27176137 27176151 EBF1 JASPAR yes 27661283
chr1 27176137 27176151 EBF1 JASPAR yes 118256534
chr1 27176156 27176165 ZEB1 JASPAR yes 27661284
chr1 27176156 27176165 ZEB1 JASPAR yes 118256535
chr1 27176160 27176167 JUN TRANSFAC yes 27661285
chr1 27176160 27176167 JUN TRANSFAC yes 118256536
chr1 27176166 27176181 HNF4A JASPAR yes 27661286
chr1 27176166 27176181 HNF4A JASPAR yes 118256537
chr1 27176167 27176181 RXRB JASPAR yes 27661287
chr1 27176167 27176181 RXRG JASPAR yes 27661288
chr1 27176167 27176181 RXRB JASPAR yes 118256538
chr1 27176167 27176181 RXRG JASPAR yes 118256539
chr1 27176167 27176182 HNF4G JASPAR yes 27661289
chr1 27176167 27176182 NR2C2 JASPAR yes 27661290
chr1 27176167 27176182 HNF4G JASPAR yes 118256540
chr1 27176167 27176182 NR2C2 JASPAR yes 118256541
chr1 27176170 27176179 Tf-LF1 TRANSFAC yes 27661291
chr1 27176170 27176179 Tf-LF1 TRANSFAC yes 118256542
chr1 27176222 27176228 SP1 TRANSFAC yes 27661292
chr1 27176222 27176228 SP1 TRANSFAC yes 118256543
chr1 27176260 27176268 FOXO3 JASPAR yes 27661293
chr1 27176260 27176268 FOXO3 JASPAR yes 118256544
chr1 27176270 27176285 RUNX2 JASPAR yes 27661294
chr1 27176270 27176285 RUNX2 JASPAR yes 118256545
chr1 27176273 27176283 MAX JASPAR yes 27661295
chr1 27176273 27176283 MAX JASPAR yes 118256546
SNP sites on vista889[chr1:27175784-27176273]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27175991 rs112143416 A T
INSM1 JUN NR3C1
182543
chr1 27176046 rs544756497 G A
HNF4A NR3C1 TCF4
182544
chr1 27176052 rs576036670 A T
ESRRA HNF4A LFA1 NR3C1 TCF4
182545
chr1 27176119 rs17162313 A G
NR3C1
182546
chr1 27176162 rs140702636 G A
JUN ZEB1
182547
Genes possibly regulated by vista889[chr1:27175784-27176273]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27113963 27124889 + PIGV ENSG00000060642.6 27113963 0.61 1.0 374 38179
chr1 27153201 27184093 + ZDHHC18 ENSG00000204160.7 27153201 0.75 1.0 375 77417
chr1 27189633 27190947 + SFN ENSG00000175793.10 27189633 0.98 1.0 376 86640
chr1 27202624 27216788 - GPN2 ENSG00000142751.10 27216788 0.72 1.0 377 59485
chr1 27216979 27226957 - GPATCH3 ENSG00000198746.8 27226957 0.52 0.99 378 49316
chr1 27226729 27273353 + NUDC ENSG00000090273.9 27226729 0.65 0.99 379 49544
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 35816
Expression level of Genes
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miRNAs possibly regulated by vista889[chr1:27175784-27176273]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results