EnhancerDB
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  3. vista894[chr1:27244420-27244792]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista894[chr1:27244420-27244792]
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Tissue distribution of vista894
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Transcription factor that possibly regulate vista894[chr1:27244420-27244792]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27244424 27244428 ESR1 TRANSFAC yes 118256749
chr1 27244440 27244448 EHF JASPAR yes 118256750
chr1 27244458 27244473 FOXA1 JASPAR yes 118256751
chr1 27244465 27244485 RREB1 JASPAR yes 118256752
chr1 27244467 27244487 RREB1 JASPAR yes 118256753
chr1 27244469 27244489 RREB1 JASPAR yes 118256754
chr1 27244471 27244491 RREB1 JASPAR yes 118256755
chr1 27244489 27244493 YY1 TRANSFAC yes 118256756
chr1 27244498 27244510 FOXI1 JASPAR yes 118256757
chr1 27244501 27244505 YY1 TRANSFAC yes 118256758
chr1 27244501 27244516 MEF2A JASPAR yes 118256759
chr1 27244502 27244517 MEF2C JASPAR yes 118256760
chr1 27244505 27244509 YY1 TRANSFAC yes 118256761
chr1 27244509 27244521 MEF2A JASPAR yes 118256762
chr1 27244509 27244521 MEF2D JASPAR yes 118256763
chr1 27244511 27244515 TEAD2 TRANSFAC yes 118256764
chr1 27244511 27244521 MNX1 JASPAR yes 118256765
chr1 27244517 27244525 FOXL1 JASPAR yes 118256766
chr1 27244545 27244549 NFE TRANSFAC yes 118256767
chr1 27244554 27244558 H1TF2 TRANSFAC yes 118256768
chr1 27244554 27244558 NFE TRANSFAC yes 118256769
chr1 27244554 27244558 SRF TRANSFAC yes 118256770
chr1 27244560 27244571 ESRRB JASPAR yes 118256771
chr1 27244600 27244611 FOXH1 JASPAR yes 118256772
chr1 27244604 27244608 YY1 TRANSFAC yes 118256773
chr1 27244609 27244620 FLI1 JASPAR yes 118256774
chr1 27244610 27244620 ELK1 JASPAR yes 118256775
chr1 27244610 27244620 ELK3 JASPAR yes 118256776
chr1 27244610 27244620 ERF JASPAR yes 118256777
chr1 27244610 27244620 ERG JASPAR yes 118256778
chr1 27244610 27244620 ETS1 JASPAR yes 118256779
chr1 27244610 27244620 ETV1 JASPAR yes 118256780
chr1 27244610 27244620 ETV3 JASPAR yes 118256781
chr1 27244610 27244620 ETV4 JASPAR yes 118256782
chr1 27244610 27244620 ETV6 JASPAR yes 118256783
chr1 27244610 27244620 FEV JASPAR yes 118256784
chr1 27244610 27244620 FLI1 JASPAR yes 118256785
chr1 27244610 27244621 ETV2 JASPAR yes 118256786
chr1 27244610 27244622 ELF1 JASPAR yes 118256787
chr1 27244610 27244622 ELF4 JASPAR yes 118256788
chr1 27244610 27244623 ELF1 JASPAR yes 118256789
chr1 27244611 27244618 SPI1 JASPAR yes 118256790
chr1 27244611 27244619 EHF JASPAR yes 118256791
chr1 27244611 27244619 FEV JASPAR yes 118256792
chr1 27244616 27244620 NFE TRANSFAC yes 118256793
chr1 27244616 27244629 SMAD2 JASPAR yes 118256794
chr1 27244621 27244631 TBR1 JASPAR yes 118256795
chr1 27244621 27244632 TBX20 JASPAR yes 118256796
chr1 27244628 27244640 TEAD1 JASPAR yes 118256797
chr1 27244645 27244649 YY1 TRANSFAC yes 118256798
chr1 27244649 27244663 ONECUT3 JASPAR yes 118256799
chr1 27244657 27244678 IRF1 JASPAR yes 118256800
chr1 27244658 27244679 IRF1 JASPAR yes 118256801
chr1 27244660 27244675 FOXP1 JASPAR yes 118256802
chr1 27244662 27244677 FOXP1 JASPAR yes 118256803
chr1 27244663 27244678 FOXP1 JASPAR yes 118256804
chr1 27244664 27244679 FOXP1 JASPAR yes 118256805
chr1 27244665 27244680 FOXP1 JASPAR yes 118256806
chr1 27244666 27244681 FOXP1 JASPAR yes 118256807
chr1 27244667 27244682 FOXP1 JASPAR yes 118256808
chr1 27244683 27244701 ESR2 JASPAR yes 118256809
chr1 27244686 27244690 ESR1 TRANSFAC yes 118256810
chr1 27244696 27244701 GATA2 JASPAR yes 118256811
chr1 27244700 27244712 NHLH1 JASPAR yes 118256812
chr1 27244701 27244711 NHLH1 JASPAR yes 118256813
chr1 27244719 27244729 SREBF1 JASPAR yes 118256814
chr1 27244719 27244729 SREBF2 JASPAR yes 118256815
chr1 27244724 27244732 NR4A2 JASPAR yes 118256816
chr1 27244729 27244740 FOSL1 JASPAR yes 118256817
chr1 27244730 27244741 JUNB JASPAR yes 118256818
chr1 27244745 27244760 TFAP2A JASPAR yes 118256819
chr1 27244745 27244760 TFAP2C JASPAR yes 118256820
chr1 27244748 27244759 TFAP2A JASPAR yes 118256821
chr1 27244748 27244759 TFAP2B JASPAR yes 118256822
chr1 27244748 27244759 TFAP2C JASPAR yes 118256823
chr1 27244748 27244760 TFAP2A JASPAR yes 118256824
chr1 27244748 27244760 TFAP2B JASPAR yes 118256825
chr1 27244748 27244760 TFAP2C JASPAR yes 118256826
chr1 27244764 27244785 IRF1 JASPAR yes 118256827
chr1 27244765 27244786 IRF1 JASPAR yes 118256828
chr1 27244766 27244787 IRF1 JASPAR yes 118256829
chr1 27244767 27244782 FOXP1 JASPAR yes 118256830
chr1 27244767 27244788 IRF1 JASPAR yes 118256831
chr1 27244768 27244789 IRF1 JASPAR yes 118256832
chr1 27244769 27244784 FOXP1 JASPAR yes 118256833
chr1 27244769 27244790 IRF1 JASPAR yes 118256834
chr1 27244770 27244785 FOXP1 JASPAR yes 118256835
chr1 27244770 27244791 IRF1 JASPAR yes 118256836
chr1 27244771 27244786 FOXP1 JASPAR yes 118256837
chr1 27244772 27244787 FOXP1 JASPAR yes 118256838
chr1 27244773 27244788 FOXP1 JASPAR yes 118256839
chr1 27244774 27244789 FOXP1 JASPAR yes 118256840
chr1 27244775 27244790 FOXP1 JASPAR yes 118256841
chr1 27244776 27244791 FOXP1 JASPAR yes 118256842
chr1 27244777 27244792 FOXP1 JASPAR yes 118256843
SNP sites on vista894[chr1:27244420-27244792]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27244438 rs142241075 A G no 182851
chr1 27244464 rs143113334 T TAC,TACAC
FOXA1
182852
chr1 27244464 rs368834321 TAC T
FOXA1
182853
chr1 27244464 rs568570993 T TAC
FOXA1
182854
Genes possibly regulated by vista894[chr1:27244420-27244792]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27153201 27184093 + ZDHHC18 ENSG00000204160.7 27153201 0.75 1.0 375 8781
chr1 27189633 27190947 + SFN ENSG00000175793.10 27189633 0.98 1.0 376 45213
chr1 27202624 27216788 - GPN2 ENSG00000142751.10 27216788 0.72 1.0 377 72368
chr1 27216979 27226957 - GPATCH3 ENSG00000198746.8 27226957 0.52 0.99 378 82537
chr1 27226729 27273353 + NUDC ENSG00000090273.9 27226729 0.65 0.99 379 82309
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 96037
chr1 27276053 27286897 - C1orf172 ENSG00000175707.7 27286897 0.8 1.0 381 57895
chr1 27320198 27327389 + TRNP1 ENSG00000253368.3 27320198 0.89 0.99 382 24594
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 0.95 1.0 383 5465
Expression level of Genes
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miRNAs possibly regulated by vista894[chr1:27244420-27244792]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results