EnhancerDB
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  3. vista896[chr1:27321452-27321840]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista896[chr1:27321452-27321840]
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Tissue distribution of vista896
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Transcription factor that possibly regulate vista896[chr1:27321452-27321840]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27321454 27321465 FLI1 JASPAR yes 27666672
chr1 27321454 27321465 FLI1 JASPAR yes 118256844
chr1 27321455 27321468 ELF1 JASPAR yes 27666673
chr1 27321455 27321468 ELF1 JASPAR yes 118256845
chr1 27321467 27321472 SP1 TRANSFAC yes 27666674
chr1 27321467 27321472 SP1 TRANSFAC yes 118256846
chr1 27321498 27321508 POU6F2 JASPAR yes 27666675
chr1 27321498 27321508 POU6F2 JASPAR yes 118256847
chr1 27321550 27321560 MZF1 JASPAR yes 27666676
chr1 27321550 27321560 MZF1 JASPAR yes 118256848
chr1 27321559 27321577 ESR1 JASPAR yes 27666677
chr1 27321559 27321577 ESR1 JASPAR yes 118256849
chr1 27321576 27321581 TFAP2A TRANSFAC yes 27666678
chr1 27321576 27321581 TFAP2A TRANSFAC yes 118256850
chr1 27321576 27321582 MZF1 JASPAR yes 27666679
chr1 27321576 27321582 MZF1 JASPAR yes 118256851
chr1 27321598 27321613 IRF9 JASPAR yes 27666680
chr1 27321598 27321613 IRF9 JASPAR yes 118256852
chr1 27321619 27321626 NKX3-1 JASPAR yes 27666681
chr1 27321619 27321626 NKX3-1 JASPAR yes 118256853
chr1 27321645 27321655 MSC JASPAR yes 27666682
chr1 27321645 27321655 MSC JASPAR yes 118256854
chr1 27321656 27321670 ATF7 JASPAR yes 27666683
chr1 27321656 27321670 BATF3 JASPAR yes 27666684
chr1 27321656 27321670 ATF7 JASPAR yes 118256855
chr1 27321656 27321670 BATF3 JASPAR yes 118256856
chr1 27321657 27321669 JDP2 JASPAR yes 27666685
chr1 27321657 27321669 JDP2 JASPAR yes 118256857
chr1 27321689 27321700 FOS JASPAR yes 27666686
chr1 27321689 27321700 FOSL1 JASPAR yes 27666687
chr1 27321689 27321700 JUND JASPAR yes 27666688
chr1 27321689 27321700 FOS JASPAR yes 118256858
chr1 27321689 27321700 FOSL1 JASPAR yes 118256859
chr1 27321689 27321700 JUND JASPAR yes 118256860
chr1 27321690 27321701 FOSL2 JASPAR yes 27666689
chr1 27321690 27321701 JUNB JASPAR yes 27666690
chr1 27321690 27321701 FOSL2 JASPAR yes 118256861
chr1 27321690 27321701 JUNB JASPAR yes 118256862
chr1 27321690 27321704 JUN JASPAR yes 27666691
chr1 27321690 27321704 JUN JASPAR yes 118256863
chr1 27321700 27321703 MYB TRANSFAC yes 27666692
chr1 27321700 27321703 MYB TRANSFAC yes 118256864
chr1 27321704 27321719 AR JASPAR yes 27666693
chr1 27321704 27321719 AR JASPAR yes 118256865
chr1 27321709 27321716 PEA3 TRANSFAC yes 27666694
chr1 27321709 27321716 PEA3 TRANSFAC yes 118256866
chr1 27321713 27321726 SMAD2 JASPAR yes 27666695
chr1 27321713 27321726 SMAD2 JASPAR yes 118256867
chr1 27321719 27321729 ID4 JASPAR yes 27666696
chr1 27321719 27321729 TCF3 JASPAR yes 27666697
chr1 27321719 27321729 TCF4 JASPAR yes 27666698
chr1 27321719 27321729 ID4 JASPAR yes 118256868
chr1 27321719 27321729 TCF3 JASPAR yes 118256869
chr1 27321719 27321729 TCF4 JASPAR yes 118256870
chr1 27321720 27321729 SNAI2 JASPAR yes 27666699
chr1 27321720 27321729 SNAI2 JASPAR yes 118256871
chr1 27321721 27321726 USF2 TRANSFAC yes 27666700
chr1 27321721 27321726 USF2 TRANSFAC yes 118256872
chr1 27321765 27321768 MYB TRANSFAC yes 27666701
chr1 27321765 27321768 MYB TRANSFAC yes 118256873
chr1 27321770 27321785 SCRT1 JASPAR yes 27666702
chr1 27321770 27321785 SCRT1 JASPAR yes 118256874
chr1 27321774 27321780 PTF TRANSFAC yes 27666703
chr1 27321774 27321780 PTF TRANSFAC yes 118256875
chr1 27321775 27321790 RFX5 JASPAR yes 27666704
chr1 27321775 27321790 RFX5 JASPAR yes 118256876
chr1 27321783 27321795 YY1 JASPAR yes 27666705
chr1 27321783 27321795 YY1 JASPAR yes 118256877
chr1 27321786 27321792 YY1 JASPAR yes 27666706
chr1 27321786 27321792 YY1 JASPAR yes 118256878
chr1 27321806 27321816 FIGLA JASPAR yes 27666707
chr1 27321806 27321816 FIGLA JASPAR yes 118256879
chr1 27321822 27321825 MYB TRANSFAC yes 27666708
chr1 27321822 27321825 MYB TRANSFAC yes 118256880
chr1 27321826 27321845 CTCF JASPAR yes 27666709
chr1 27321826 27321845 CTCF JASPAR yes 118256881
chr1 27321827 27321840 TFAP2A JASPAR yes 27666710
chr1 27321827 27321840 TFAP2B JASPAR yes 27666711
chr1 27321827 27321840 TFAP2C JASPAR yes 27666712
chr1 27321827 27321840 TFAP2A JASPAR yes 118256882
chr1 27321827 27321840 TFAP2B JASPAR yes 118256883
chr1 27321827 27321840 TFAP2C JASPAR yes 118256884
chr1 27321828 27321839 EBF1 JASPAR yes 27666713
chr1 27321828 27321839 EBF1 JASPAR yes 118256885
chr1 27321837 27321841 LFA1 TRANSFAC yes 27666714
chr1 27321837 27321841 LFA1 TRANSFAC yes 118256886
chr1 27321838 27321847 SNAI2 JASPAR yes 27666715
chr1 27321838 27321847 SNAI2 JASPAR yes 118256887
chr1 27321838 27321848 ID4 JASPAR yes 27666716
chr1 27321838 27321848 NHLH1 JASPAR yes 27666717
chr1 27321838 27321848 TCF3 JASPAR yes 27666718
chr1 27321838 27321848 TCF4 JASPAR yes 27666719
chr1 27321838 27321848 ID4 JASPAR yes 118256888
chr1 27321838 27321848 NHLH1 JASPAR yes 118256889
chr1 27321838 27321848 TCF3 JASPAR yes 118256890
chr1 27321838 27321848 TCF4 JASPAR yes 118256891
chr1 27321840 27321849 ZEB1 JASPAR yes 27666720
chr1 27321840 27321849 ZEB1 JASPAR yes 118256892
SNP sites on vista896[chr1:27321452-27321840]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27321794 rs148609498 C T
YY1
183152
Genes possibly regulated by vista896[chr1:27321452-27321840]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27216979 27226957 - GPATCH3 ENSG00000198746.8 27226957 0.52 0.99 378 5505
chr1 27226729 27273353 + NUDC ENSG00000090273.9 27226729 0.65 0.99 379 5277
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 19005
chr1 27276053 27286897 - C1orf172 ENSG00000175707.7 27286897 0.8 1.0 381 65445
chr1 27320198 27327389 + TRNP1 ENSG00000253368.3 27320198 0.89 0.99 382 98746
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 0.95 1.0 383 82513
Expression level of Genes
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miRNAs possibly regulated by vista896[chr1:27321452-27321840]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results