EnhancerDB
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  3. vista898[chr1:27337570-27337809]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista898[chr1:27337570-27337809]
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Tissue distribution of vista898
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Transcription factor that possibly regulate vista898[chr1:27337570-27337809]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27337578 27337582 NFE TRANSFAC yes 27668798
chr1 27337578 27337582 NFE TRANSFAC yes 118256958
chr1 27337585 27337595 GSC2 JASPAR yes 27668799
chr1 27337585 27337595 GSC JASPAR yes 27668800
chr1 27337585 27337595 GSC2 JASPAR yes 118256959
chr1 27337585 27337595 GSC JASPAR yes 118256960
chr1 27337586 27337594 OTX1 JASPAR yes 27668801
chr1 27337586 27337594 OTX2 JASPAR yes 27668802
chr1 27337586 27337594 RHOXF1 JASPAR yes 27668803
chr1 27337586 27337594 OTX1 JASPAR yes 118256961
chr1 27337586 27337594 OTX2 JASPAR yes 118256962
chr1 27337586 27337594 RHOXF1 JASPAR yes 118256963
chr1 27337586 27337595 PITX3 JASPAR yes 27668804
chr1 27337586 27337595 PITX3 JASPAR yes 118256964
chr1 27337609 27337619 EVX1 JASPAR yes 27668805
chr1 27337609 27337619 EVX2 JASPAR yes 27668806
chr1 27337609 27337619 EVX1 JASPAR yes 118256965
chr1 27337609 27337619 EVX2 JASPAR yes 118256966
chr1 27337617 27337628 USF1 JASPAR yes 27668807
chr1 27337617 27337628 USF2 JASPAR yes 27668808
chr1 27337617 27337628 USF1 JASPAR yes 118256967
chr1 27337617 27337628 USF2 JASPAR yes 118256968
chr1 27337622 27337630 MEIS2 JASPAR yes 27668809
chr1 27337622 27337630 MEIS3 JASPAR yes 27668810
chr1 27337622 27337630 MEIS2 JASPAR yes 118256969
chr1 27337622 27337630 MEIS3 JASPAR yes 118256970
chr1 27337636 27337648 TEAD1 JASPAR yes 27668811
chr1 27337636 27337648 TEAD1 JASPAR yes 118256971
chr1 27337638 27337648 TEAD1 JASPAR yes 27668812
chr1 27337638 27337648 TEAD4 JASPAR yes 27668813
chr1 27337638 27337648 TEAD1 JASPAR yes 118256972
chr1 27337638 27337648 TEAD4 JASPAR yes 118256973
chr1 27337639 27337647 TEAD3 JASPAR yes 27668814
chr1 27337639 27337647 TEAD3 JASPAR yes 118256974
chr1 27337667 27337681 JUN JASPAR yes 27668815
chr1 27337667 27337681 JUN JASPAR yes 118256975
chr1 27337670 27337681 FOSL2 JASPAR yes 27668816
chr1 27337670 27337681 JUNB JASPAR yes 27668817
chr1 27337670 27337681 FOSL2 JASPAR yes 118256976
chr1 27337670 27337681 JUNB JASPAR yes 118256977
chr1 27337671 27337682 FOS JASPAR yes 27668818
chr1 27337671 27337682 FOSL1 JASPAR yes 27668819
chr1 27337671 27337682 JUND JASPAR yes 27668820
chr1 27337671 27337682 FOS JASPAR yes 118256978
chr1 27337671 27337682 FOSL1 JASPAR yes 118256979
chr1 27337671 27337682 JUND JASPAR yes 118256980
chr1 27337672 27337683 FOSL2 JASPAR yes 27668821
chr1 27337672 27337683 JUNB JASPAR yes 27668822
chr1 27337672 27337683 NFE2L2 JASPAR yes 27668823
chr1 27337672 27337683 FOSL2 JASPAR yes 118256981
chr1 27337672 27337683 JUNB JASPAR yes 118256982
chr1 27337672 27337683 NFE2L2 JASPAR yes 118256983
chr1 27337673 27337680 JUN TRANSFAC yes 27668824
chr1 27337673 27337680 JUN TRANSFAC yes 118256984
chr1 27337673 27337684 BATF JASPAR yes 27668825
chr1 27337673 27337684 BATF JASPAR yes 118256985
chr1 27337679 27337699 ESR1 JASPAR yes 27668826
chr1 27337679 27337699 ESR1 JASPAR yes 118256986
chr1 27337692 27337698 NFE2 TRANSFAC yes 27668827
chr1 27337692 27337698 NFE2 TRANSFAC yes 118256987
chr1 27337694 27337715 ZNF263 JASPAR yes 27668828
chr1 27337694 27337715 ZNF263 JASPAR yes 118256988
chr1 27337695 27337704 SP1 TRANSFAC yes 27668829
chr1 27337695 27337704 SP1 TRANSFAC yes 118256989
chr1 27337696 27337702 SP1 TRANSFAC yes 27668830
chr1 27337696 27337702 SP1 TRANSFAC yes 118256990
chr1 27337696 27337706 SP1 JASPAR yes 27668831
chr1 27337696 27337706 SP1 JASPAR yes 118256991
chr1 27337696 27337715 CTCF JASPAR yes 27668832
chr1 27337696 27337715 CTCF JASPAR yes 118256992
chr1 27337697 27337704 SP1 TRANSFAC yes 27668833
chr1 27337697 27337704 SP1 TRANSFAC yes 118256993
chr1 27337698 27337703 SP1 TRANSFAC yes 27668834
chr1 27337698 27337703 SP1 TRANSFAC yes 118256994
chr1 27337698 27337704 SP1 TRANSFAC yes 27668835
chr1 27337698 27337704 SP1 TRANSFAC yes 118256995
chr1 27337698 27337705 SP1 TRANSFAC yes 27668836
chr1 27337698 27337705 SP1 TRANSFAC yes 118256996
chr1 27337702 27337708 SP1 TRANSFAC yes 27668837
chr1 27337702 27337708 SP1 TRANSFAC yes 118256997
chr1 27337716 27337730 EBF1 JASPAR yes 27668838
chr1 27337716 27337730 EBF1 JASPAR yes 118256998
chr1 27337718 27337723 ETS2 TRANSFAC yes 27668839
chr1 27337718 27337723 ETS2 TRANSFAC yes 118256999
chr1 27337724 27337730 MAZ TRANSFAC yes 27668840
chr1 27337724 27337730 MAZ TRANSFAC yes 118257000
chr1 27337724 27337735 SP1 TRANSFAC yes 27668841
chr1 27337724 27337735 SP1 TRANSFAC yes 118257001
chr1 27337729 27337734 SP1 TRANSFAC yes 27668842
chr1 27337729 27337734 SP1 TRANSFAC yes 118257002
chr1 27337730 27337740 ZNF740 JASPAR yes 27668843
chr1 27337730 27337740 ZNF740 JASPAR yes 118257003
chr1 27337736 27337749 NFKB2 JASPAR yes 27668844
chr1 27337736 27337749 NFKB2 JASPAR yes 118257004
chr1 27337737 27337750 NFKB1 JASPAR yes 27668845
chr1 27337737 27337750 NFKB2 JASPAR yes 27668846
chr1 27337737 27337750 NFKB1 JASPAR yes 118257005
chr1 27337737 27337750 NFKB2 JASPAR yes 118257006
chr1 27337738 27337748 GSC JASPAR yes 27668847
chr1 27337738 27337748 NFKB1 JASPAR yes 27668848
chr1 27337738 27337748 REL JASPAR yes 27668849
chr1 27337738 27337748 GSC JASPAR yes 118257007
chr1 27337738 27337748 NFKB1 JASPAR yes 118257008
chr1 27337738 27337748 REL JASPAR yes 118257009
chr1 27337757 27337767 SP1 JASPAR yes 27668850
chr1 27337757 27337767 SP1 JASPAR yes 118257010
chr1 27337772 27337777 ETS2 TRANSFAC yes 27668851
chr1 27337772 27337777 ETS2 TRANSFAC yes 118257011
chr1 27337789 27337799 SP1 JASPAR yes 27668852
chr1 27337789 27337799 SP1 JASPAR yes 118257012
chr1 27337797 27337808 NFKB1 JASPAR yes 27668853
chr1 27337797 27337808 NFKB1 JASPAR yes 118257013
SNP sites on vista898[chr1:27337570-27337809]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27337631 rs186068848 G A no 183303
chr1 27337647 rs145294187 CCTCGGCGAA C
TEAD1 TEAD3 TEAD4
183304
chr1 27337647 rs372804104 CCTCGGCGAA C
TEAD1 TEAD3 TEAD4
183305
chr1 27337651 rs191061519 G C no 183306
chr1 27337654 rs548043696 G A no 183307
chr1 27337747 rs117543626 C G
GSC NFKB1 NFKB2 REL
183308
chr1 27337748 rs371708533 C T
GSC NFKB1 NFKB2 REL
183309
Genes possibly regulated by vista898[chr1:27337570-27337809]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 2887
chr1 27276053 27286897 - C1orf172 ENSG00000175707.7 27286897 0.8 1.0 381 49327
chr1 27320198 27327389 + TRNP1 ENSG00000253368.3 27320198 0.89 0.99 382 82628
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 0.95 1.0 383 98482
Expression level of Genes
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miRNAs possibly regulated by vista898[chr1:27337570-27337809]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results