EnhancerDB
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  3. vista9[chr1:936652-937138]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9[chr1:936652-937138]
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Tissue distribution of vista9
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Transcription factor that possibly regulate vista9[chr1:936652-937138]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 936653 936661 PAX4 JASPAR yes 118213344
chr1 936660 936665 SP1 TRANSFAC yes 118213345
chr1 936686 936698 CREB1 JASPAR yes 118213346
chr1 936691 936706 ZIC4 JASPAR yes 118213347
chr1 936696 936708 GLI2 JASPAR yes 118213348
chr1 936697 936709 ZBTB7A JASPAR yes 118213349
chr1 936702 936706 H4TF2 TRANSFAC yes 118213350
chr1 936719 936733 GLIS2 JASPAR yes 118213351
chr1 936719 936733 GLIS3 JASPAR yes 118213352
chr1 936722 936727 SP1 TRANSFAC yes 118213353
chr1 936723 936733 ZNF740 JASPAR yes 118213354
chr1 936723 936735 ZBTB7B JASPAR yes 118213355
chr1 936726 936737 NFKB1 JASPAR yes 118213356
chr1 936727 936741 PLAG1 JASPAR yes 118213357
chr1 936728 936742 PLAG1 JASPAR yes 118213358
chr1 936729 936733 H4TF2 TRANSFAC yes 118213359
chr1 936732 936743 EBF1 JASPAR yes 118213360
chr1 936740 936745 ETS2 TRANSFAC yes 118213361
chr1 936744 936756 TFAP2A JASPAR yes 118213362
chr1 936744 936756 TFAP2B JASPAR yes 118213363
chr1 936744 936756 TFAP2C JASPAR yes 118213364
chr1 936745 936756 EBF1 JASPAR yes 118213365
chr1 936752 936758 MAZ TRANSFAC yes 118213366
chr1 936761 936772 NFKB1 JASPAR yes 118213367
chr1 936766 936782 ZNF143 JASPAR yes 118213368
chr1 936771 936781 TBX21 JASPAR yes 118213369
chr1 936772 936786 PLAG1 JASPAR yes 118213370
chr1 936781 936802 ZNF263 JASPAR yes 118213371
chr1 936788 936809 ZNF263 JASPAR yes 118213372
chr1 936795 936816 ZNF263 JASPAR yes 118213373
chr1 936798 936808 SP1 JASPAR yes 118213374
chr1 936798 936819 ZNF263 JASPAR yes 118213375
chr1 936801 936806 SP1 TRANSFAC yes 118213376
chr1 936802 936812 ZNF740 JASPAR yes 118213377
chr1 936803 936808 TFAP2A TRANSFAC yes 118213378
chr1 936803 936809 MZF1 JASPAR yes 118213379
chr1 936803 936813 SP1 JASPAR yes 118213380
chr1 936804 936814 SP1 JASPAR yes 118213381
chr1 936805 936811 MAZ TRANSFAC yes 118213382
chr1 936806 936816 MZF1 JASPAR yes 118213383
chr1 936809 936828 REST JASPAR yes 118213384
chr1 936848 936854 MAZ TRANSFAC yes 118213385
chr1 936848 936859 E2F6 JASPAR yes 118213386
chr1 936870 936875 TFAP2A TRANSFAC yes 118213387
chr1 936870 936876 MZF1 JASPAR yes 118213388
chr1 936893 936911 NFYA JASPAR yes 118213389
chr1 936894 936904 SREBF1 JASPAR yes 118213390
chr1 936896 936912 NFYA JASPAR yes 118213391
chr1 936898 936908 EN2 JASPAR yes 118213392
chr1 936899 936914 NFYB JASPAR yes 118213393
chr1 936901 936906 NFY TRANSFAC yes 118213394
chr1 936903 936909 NFIC JASPAR yes 118213395
chr1 936918 936938 ESR1 JASPAR yes 118213396
chr1 936924 936928 LFA1 TRANSFAC yes 118213397
chr1 936925 936935 ID4 JASPAR yes 118213398
chr1 936925 936935 TCF4 JASPAR yes 118213399
chr1 936927 936932 USF2 TRANSFAC yes 118213400
chr1 936950 936956 ETS1 JASPAR yes 118213401
chr1 936950 936956 SPI1 JASPAR yes 118213402
chr1 936956 936966 MZF1 JASPAR yes 118213403
chr1 936957 936978 ZNF263 JASPAR yes 118213404
chr1 936959 936965 SP1 TRANSFAC yes 118213405
chr1 936959 936969 SP1 JASPAR yes 118213406
chr1 936959 936969 SP1 TRANSFAC yes 118213407
chr1 936987 936999 INSM1 JASPAR yes 118213408
chr1 936987 937001 TLX1 JASPAR yes 118213409
chr1 936987 937002 TFAP2A JASPAR yes 118213410
chr1 936988 937002 GLIS2 JASPAR yes 118213411
chr1 937007 937022 ZBTB33 JASPAR yes 118213412
chr1 937012 937023 E2F1 JASPAR yes 118213413
chr1 937013 937024 E2F4 JASPAR yes 118213414
chr1 937013 937024 E2F6 JASPAR yes 118213415
chr1 937017 937022 ETS2 TRANSFAC yes 118213416
chr1 937024 937045 REST JASPAR yes 118213417
chr1 937025 937044 REST JASPAR yes 118213418
chr1 937036 937057 REST JASPAR yes 118213419
chr1 937047 937063 GLIS1 JASPAR yes 118213420
chr1 937048 937062 ZIC1 JASPAR yes 118213421
chr1 937060 937073 TFAP2A JASPAR yes 118213422
chr1 937060 937073 TFAP2B JASPAR yes 118213423
chr1 937060 937073 TFAP2C JASPAR yes 118213424
chr1 937062 937073 TFAP2A JASPAR yes 118213425
chr1 937062 937073 TFAP2B JASPAR yes 118213426
chr1 937062 937073 TFAP2C JASPAR yes 118213427
chr1 937062 937076 PLAG1 JASPAR yes 118213428
chr1 937070 937082 ZBTB7B JASPAR yes 118213429
chr1 937071 937081 ZNF740 JASPAR yes 118213430
chr1 937073 937083 ZNF740 JASPAR yes 118213431
chr1 937078 937092 ZIC1 JASPAR yes 118213432
chr1 937078 937093 ZIC3 JASPAR yes 118213433
chr1 937078 937093 ZIC4 JASPAR yes 118213434
chr1 937081 937091 SP1 JASPAR yes 118213435
chr1 937082 937088 SP1 TRANSFAC yes 118213436
chr1 937099 937113 GLIS2 JASPAR yes 118213437
SNP sites on vista9[chr1:936652-937138]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 936658 rs573790634 T A
PAX4
1799
chr1 936687 rs114518990 C A
CREB1
1800
chr1 936713 rs61766282 G T no 1801
chr1 936754 rs537622510 G A
EBF1 MAZ TFAP2A TFAP2B TFAP2C
1802
chr1 936783 rs542425676 G A
PLAG1 ZNF263
1803
chr1 936848 rs149671836 G C
E2F6 MAZ
1804
chr1 936968 rs186864785 C T
SP1 ZNF263
1805
chr1 937047 rs577785168 C G
GLIS1 REST
1806
chr1 937131 rs191373106 G A,T no 1807
Genes possibly regulated by vista9[chr1:936652-937138]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 23608
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 29793
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 58037
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 59315
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 65225
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 80845
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 98900
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 88335
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 81635
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 27451
Expression level of Genes
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miRNAs possibly regulated by vista9[chr1:936652-937138]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results