EnhancerDB
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  3. vista900[chr1:27383957-27384315]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista900[chr1:27383957-27384315]
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Tissue distribution of vista900
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Transcription factor that possibly regulate vista900[chr1:27383957-27384315]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27383961 27383965 H4TF2 TRANSFAC yes 27673583
chr1 27383961 27383965 H4TF2 TRANSFAC yes 118257041
chr1 27383991 27383997 PEA3 TRANSFAC yes 27673584
chr1 27383991 27383997 PEA3 TRANSFAC yes 118257042
chr1 27383994 27384005 NFKB1 JASPAR yes 27673585
chr1 27383994 27384005 NFKB1 JASPAR yes 118257043
chr1 27384004 27384018 PLAG1 JASPAR yes 27673586
chr1 27384004 27384018 PLAG1 JASPAR yes 118257044
chr1 27384027 27384041 GATA2 JASPAR yes 27673587
chr1 27384027 27384041 GATA2 JASPAR yes 118257045
chr1 27384031 27384039 GATA3 JASPAR yes 27673588
chr1 27384031 27384039 GATA5 JASPAR yes 27673589
chr1 27384031 27384039 GATA3 JASPAR yes 118257046
chr1 27384031 27384039 GATA5 JASPAR yes 118257047
chr1 27384031 27384049 NFYA JASPAR yes 27673590
chr1 27384031 27384049 NFYA JASPAR yes 118257048
chr1 27384034 27384050 NFYA JASPAR yes 27673591
chr1 27384034 27384050 NFYA JASPAR yes 118257049
chr1 27384037 27384052 NFYB JASPAR yes 27673592
chr1 27384037 27384052 NFYB JASPAR yes 118257050
chr1 27384054 27384058 H4TF2 TRANSFAC yes 27673593
chr1 27384054 27384058 H4TF2 TRANSFAC yes 118257051
chr1 27384067 27384073 MZF1 JASPAR yes 27673594
chr1 27384067 27384073 MZF1 JASPAR yes 118257052
chr1 27384071 27384082 PHOX2A JASPAR yes 27673595
chr1 27384071 27384082 PHOX2A JASPAR yes 118257053
chr1 27384072 27384092 RREB1 JASPAR yes 27673596
chr1 27384072 27384092 RREB1 JASPAR yes 118257054
chr1 27384074 27384084 ALX3 JASPAR yes 27673597
chr1 27384074 27384084 EN2 JASPAR yes 27673598
chr1 27384074 27384084 ESX1 JASPAR yes 27673599
chr1 27384074 27384084 GBX1 JASPAR yes 27673600
chr1 27384074 27384084 GSX1 JASPAR yes 27673601
chr1 27384074 27384084 HOXA2 JASPAR yes 27673602
chr1 27384074 27384084 LBX2 JASPAR yes 27673603
chr1 27384074 27384084 ALX3 JASPAR yes 118257055
chr1 27384074 27384084 EN2 JASPAR yes 118257056
chr1 27384074 27384084 ESX1 JASPAR yes 118257057
chr1 27384074 27384084 GBX1 JASPAR yes 118257058
chr1 27384074 27384084 GSX1 JASPAR yes 118257059
chr1 27384074 27384084 HOXA2 JASPAR yes 118257060
chr1 27384074 27384084 LBX2 JASPAR yes 118257061
chr1 27384075 27384079 H1TF2 TRANSFAC yes 27673604
chr1 27384075 27384079 NFE TRANSFAC yes 27673605
chr1 27384075 27384079 SRF TRANSFAC yes 27673606
chr1 27384075 27384079 H1TF2 TRANSFAC yes 118257062
chr1 27384075 27384079 NFE TRANSFAC yes 118257063
chr1 27384075 27384079 SRF TRANSFAC yes 118257064
chr1 27384075 27384083 BSX JASPAR yes 27673607
chr1 27384075 27384083 DLX6 JASPAR yes 27673608
chr1 27384075 27384083 MSX1 JASPAR yes 27673609
chr1 27384075 27384083 MSX2 JASPAR yes 27673610
chr1 27384075 27384083 BSX JASPAR yes 118257065
chr1 27384075 27384083 DLX6 JASPAR yes 118257066
chr1 27384075 27384083 MSX1 JASPAR yes 118257067
chr1 27384075 27384083 MSX2 JASPAR yes 118257068
chr1 27384079 27384098 CTCF JASPAR yes 27673611
chr1 27384079 27384098 CTCF JASPAR yes 118257069
chr1 27384095 27384101 ZNF354C JASPAR yes 27673612
chr1 27384095 27384101 ZNF354C JASPAR yes 118257070
chr1 27384102 27384113 FOXA1 JASPAR yes 27673613
chr1 27384102 27384113 FOXA1 JASPAR yes 118257071
chr1 27384102 27384114 POU3F1 JASPAR yes 27673614
chr1 27384102 27384114 POU3F2 JASPAR yes 27673615
chr1 27384102 27384114 POU3F1 JASPAR yes 118257072
chr1 27384102 27384114 POU3F2 JASPAR yes 118257073
chr1 27384102 27384115 POU2F2 JASPAR yes 27673616
chr1 27384102 27384115 POU2F2 JASPAR yes 118257074
chr1 27384102 27384117 FOXA1 JASPAR yes 27673617
chr1 27384102 27384117 FOXA1 JASPAR yes 118257075
chr1 27384103 27384112 POU3F4 JASPAR yes 27673618
chr1 27384103 27384112 POU5F1B JASPAR yes 27673619
chr1 27384103 27384112 POU3F4 JASPAR yes 118257076
chr1 27384103 27384112 POU5F1B JASPAR yes 118257077
chr1 27384103 27384114 FOXB1 JASPAR yes 27673620
chr1 27384103 27384114 FOXC1 JASPAR yes 27673621
chr1 27384103 27384114 FOXB1 JASPAR yes 118257078
chr1 27384103 27384114 FOXC1 JASPAR yes 118257079
chr1 27384103 27384115 FOXC2 JASPAR yes 27673622
chr1 27384103 27384115 FOXC2 JASPAR yes 118257080
chr1 27384111 27384116 GATA2 JASPAR yes 27673623
chr1 27384111 27384116 GATA2 JASPAR yes 118257081
chr1 27384124 27384130 ZNF354C JASPAR yes 27673624
chr1 27384124 27384130 ZNF354C JASPAR yes 118257082
chr1 27384125 27384135 FIGLA JASPAR yes 27673625
chr1 27384125 27384135 FIGLA JASPAR yes 118257083
chr1 27384127 27384132 USF2 TRANSFAC yes 27673626
chr1 27384127 27384132 USF2 TRANSFAC yes 118257084
chr1 27384133 27384151 RARA JASPAR yes 27673627
chr1 27384133 27384151 RARA JASPAR yes 118257085
chr1 27384135 27384145 EMX1 JASPAR yes 27673628
chr1 27384135 27384145 EMX2 JASPAR yes 27673629
chr1 27384135 27384145 EN2 JASPAR yes 27673630
chr1 27384135 27384145 ESX1 JASPAR yes 27673631
chr1 27384135 27384145 EVX1 JASPAR yes 27673632
chr1 27384135 27384145 EVX2 JASPAR yes 27673633
chr1 27384135 27384145 GBX1 JASPAR yes 27673634
chr1 27384135 27384145 GBX2 JASPAR yes 27673635
chr1 27384135 27384145 GSX1 JASPAR yes 27673636
chr1 27384135 27384145 HOXA2 JASPAR yes 27673637
chr1 27384135 27384145 HOXB2 JASPAR yes 27673638
chr1 27384135 27384145 HOXB3 JASPAR yes 27673639
chr1 27384135 27384145 LBX2 JASPAR yes 27673640
chr1 27384135 27384145 LHX2 JASPAR yes 27673641
chr1 27384135 27384145 LHX6 JASPAR yes 27673642
chr1 27384135 27384145 MEOX1 JASPAR yes 27673643
chr1 27384135 27384145 MEOX2 JASPAR yes 27673644
chr1 27384135 27384145 NOTO JASPAR yes 27673645
chr1 27384135 27384145 POU6F1 JASPAR yes 27673646
chr1 27384135 27384145 EMX1 JASPAR yes 118257086
chr1 27384135 27384145 EMX2 JASPAR yes 118257087
chr1 27384135 27384145 EN2 JASPAR yes 118257088
chr1 27384135 27384145 ESX1 JASPAR yes 118257089
chr1 27384135 27384145 EVX1 JASPAR yes 118257090
chr1 27384135 27384145 EVX2 JASPAR yes 118257091
chr1 27384135 27384145 GBX1 JASPAR yes 118257092
chr1 27384135 27384145 GBX2 JASPAR yes 118257093
chr1 27384135 27384145 GSX1 JASPAR yes 118257094
chr1 27384135 27384145 HOXA2 JASPAR yes 118257095
chr1 27384135 27384145 HOXB2 JASPAR yes 118257096
chr1 27384135 27384145 HOXB3 JASPAR yes 118257097
chr1 27384135 27384145 LBX2 JASPAR yes 118257098
chr1 27384135 27384145 LHX2 JASPAR yes 118257099
chr1 27384135 27384145 LHX6 JASPAR yes 118257100
chr1 27384135 27384145 MEOX1 JASPAR yes 118257101
chr1 27384135 27384145 MEOX2 JASPAR yes 118257102
chr1 27384135 27384145 NOTO JASPAR yes 118257103
chr1 27384135 27384145 POU6F1 JASPAR yes 118257104
chr1 27384136 27384144 DLX6 JASPAR yes 27673647
chr1 27384136 27384144 EN1 JASPAR yes 27673648
chr1 27384136 27384144 LBX1 JASPAR yes 27673649
chr1 27384136 27384144 PAX4 JASPAR yes 27673650
chr1 27384136 27384144 PDX1 JASPAR yes 27673651
chr1 27384136 27384144 VAX1 JASPAR yes 27673652
chr1 27384136 27384144 VAX2 JASPAR yes 27673653
chr1 27384136 27384144 VSX1 JASPAR yes 27673654
chr1 27384136 27384144 VSX2 JASPAR yes 27673655
chr1 27384136 27384144 DLX6 JASPAR yes 118257105
chr1 27384136 27384144 EN1 JASPAR yes 118257106
chr1 27384136 27384144 LBX1 JASPAR yes 118257107
chr1 27384136 27384144 PAX4 JASPAR yes 118257108
chr1 27384136 27384144 PDX1 JASPAR yes 118257109
chr1 27384136 27384144 VAX1 JASPAR yes 118257110
chr1 27384136 27384144 VAX2 JASPAR yes 118257111
chr1 27384136 27384144 VSX1 JASPAR yes 118257112
chr1 27384136 27384144 VSX2 JASPAR yes 118257113
chr1 27384151 27384165 E2F7 JASPAR yes 27673656
chr1 27384151 27384165 E2F7 JASPAR yes 118257114
chr1 27384185 27384190 ETS2 TRANSFAC yes 27673657
chr1 27384185 27384190 ETS2 TRANSFAC yes 118257115
chr1 27384187 27384197 SP1 JASPAR yes 27673658
chr1 27384187 27384197 SP1 JASPAR yes 118257116
chr1 27384187 27384201 GLIS2 JASPAR yes 27673659
chr1 27384187 27384201 GLIS2 JASPAR yes 118257117
chr1 27384191 27384201 ZNF740 JASPAR yes 27673660
chr1 27384191 27384201 ZNF740 JASPAR yes 118257118
chr1 27384197 27384201 LFA1 TRANSFAC yes 27673661
chr1 27384197 27384201 LFA1 TRANSFAC yes 118257119
chr1 27384207 27384213 NFE2 TRANSFAC yes 27673662
chr1 27384207 27384213 NFE2 TRANSFAC yes 118257120
chr1 27384208 27384220 TFAP2A JASPAR yes 27673663
chr1 27384208 27384220 TFAP2B JASPAR yes 27673664
chr1 27384208 27384220 TFAP2C JASPAR yes 27673665
chr1 27384208 27384220 TFAP2A JASPAR yes 118257121
chr1 27384208 27384220 TFAP2B JASPAR yes 118257122
chr1 27384208 27384220 TFAP2C JASPAR yes 118257123
chr1 27384208 27384223 TFAP2A JASPAR yes 27673666
chr1 27384208 27384223 TFAP2A JASPAR yes 118257124
chr1 27384241 27384245 H4TF2 TRANSFAC yes 27673667
chr1 27384241 27384245 H4TF2 TRANSFAC yes 118257125
chr1 27384260 27384265 MYB TRANSFAC yes 27673668
chr1 27384260 27384265 MYB TRANSFAC yes 118257126
chr1 27384283 27384300 ZNF410 JASPAR yes 27673669
chr1 27384283 27384300 ZNF410 JASPAR yes 118257127
SNP sites on vista900[chr1:27383957-27384315]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27384044 rs376598465 G T
NFYA NFYB
183851
chr1 27384094 rs57533909 G C
CTCF
183852
chr1 27384133 rs76325923 G A
FIGLA RARA
183853
chr1 27384193 rs35256471 CG C
GLIS2 SP1 ZNF740
183854
chr1 27384193 rs397861153 CG C
GLIS2 SP1 ZNF740
183855
chr1 27384193 rs574938964 C CG
GLIS2 SP1 ZNF740
183856
chr1 27384315 rs10430146 A G no 183857
Genes possibly regulated by vista900[chr1:27383957-27384315]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27276053 27286897 - C1orf172 ENSG00000175707.7 27286897 0.8 1.0 381 2940
chr1 27320198 27327389 + TRNP1 ENSG00000253368.3 27320198 0.89 0.99 382 36241
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 0.95 1.0 383 55370
Expression level of Genes
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miRNAs possibly regulated by vista900[chr1:27383957-27384315]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results