EnhancerDB
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  3. vista901[chr1:27400779-27401092]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista901[chr1:27400779-27401092]
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Tissue distribution of vista901
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Transcription factor that possibly regulate vista901[chr1:27400779-27401092]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27400794 27400807 HNF1B JASPAR yes 27675166
chr1 27400794 27400807 HNF1B JASPAR yes 118257128
chr1 27400796 27400802 TBP TRANSFAC yes 27675167
chr1 27400796 27400802 TBP TRANSFAC yes 118257129
chr1 27400806 27400813 SPIB JASPAR yes 27675168
chr1 27400806 27400813 SPIB JASPAR yes 118257130
chr1 27400811 27400820 NKX2-8 JASPAR yes 27675169
chr1 27400811 27400820 NKX2-8 JASPAR yes 118257131
chr1 27400811 27400821 NKX2-3 JASPAR yes 27675170
chr1 27400811 27400821 NKX2-3 JASPAR yes 118257132
chr1 27400829 27400833 NFE TRANSFAC yes 27675171
chr1 27400829 27400833 NFE TRANSFAC yes 118257133
chr1 27400831 27400852 REST JASPAR yes 27675172
chr1 27400831 27400852 REST JASPAR yes 118257134
chr1 27400840 27400855 FOXP1 JASPAR yes 27675173
chr1 27400840 27400855 FOXP1 JASPAR yes 118257135
chr1 27400841 27400852 FOXA1 JASPAR yes 27675174
chr1 27400841 27400852 FOXA1 JASPAR yes 118257136
chr1 27400843 27400854 FOXP2 JASPAR yes 27675175
chr1 27400843 27400854 FOXP2 JASPAR yes 118257137
chr1 27400858 27400872 JUN JASPAR yes 27675176
chr1 27400858 27400872 JUN JASPAR yes 118257138
chr1 27400860 27400871 BATF JASPAR yes 27675177
chr1 27400860 27400871 BATF JASPAR yes 118257139
chr1 27400861 27400872 FOSL2 JASPAR yes 27675178
chr1 27400861 27400872 JUNB JASPAR yes 27675179
chr1 27400861 27400872 FOSL2 JASPAR yes 118257140
chr1 27400861 27400872 JUNB JASPAR yes 118257141
chr1 27400862 27400873 FOS JASPAR yes 27675180
chr1 27400862 27400873 FOSL1 JASPAR yes 27675181
chr1 27400862 27400873 JUND JASPAR yes 27675182
chr1 27400862 27400873 NFE2 JASPAR yes 27675183
chr1 27400862 27400873 FOS JASPAR yes 118257142
chr1 27400862 27400873 FOSL1 JASPAR yes 118257143
chr1 27400862 27400873 JUND JASPAR yes 118257144
chr1 27400862 27400873 NFE2 JASPAR yes 118257145
chr1 27400863 27400872 JDP2 JASPAR yes 27675184
chr1 27400863 27400872 JDP2 JASPAR yes 118257146
chr1 27400863 27400874 FOSL2 JASPAR yes 27675185
chr1 27400863 27400874 JUNB JASPAR yes 27675186
chr1 27400863 27400874 FOSL2 JASPAR yes 118257147
chr1 27400863 27400874 JUNB JASPAR yes 118257148
chr1 27400863 27400877 JUN JASPAR yes 27675187
chr1 27400863 27400877 JUN JASPAR yes 118257149
chr1 27400864 27400875 BATF JASPAR yes 27675188
chr1 27400864 27400875 BATF JASPAR yes 118257150
chr1 27400866 27400876 MEOX2 JASPAR yes 27675189
chr1 27400866 27400876 MEOX2 JASPAR yes 118257151
chr1 27400866 27400883 ZNF410 JASPAR yes 27675190
chr1 27400866 27400883 ZNF410 JASPAR yes 118257152
chr1 27400869 27400873 YY1 TRANSFAC yes 27675191
chr1 27400869 27400873 YY1 TRANSFAC yes 118257153
chr1 27400873 27400883 SREBF1 JASPAR yes 27675192
chr1 27400873 27400883 SREBF2 JASPAR yes 27675193
chr1 27400873 27400883 SREBF1 JASPAR yes 118257154
chr1 27400873 27400883 SREBF2 JASPAR yes 118257155
chr1 27400874 27400882 MGA JASPAR yes 27675194
chr1 27400874 27400882 MGA JASPAR yes 118257156
chr1 27400877 27400888 ESRRA JASPAR yes 27675195
chr1 27400877 27400888 ESRRB JASPAR yes 27675196
chr1 27400877 27400888 ESRRA JASPAR yes 118257157
chr1 27400877 27400888 ESRRB JASPAR yes 118257158
chr1 27400886 27400900 PLAG1 JASPAR yes 27675197
chr1 27400886 27400900 PLAG1 JASPAR yes 118257159
chr1 27400891 27400906 PRDM1 JASPAR yes 27675198
chr1 27400891 27400906 PRDM1 JASPAR yes 118257160
chr1 27400892 27400913 IRF1 JASPAR yes 27675199
chr1 27400892 27400913 IRF1 JASPAR yes 118257161
chr1 27400896 27400911 STAT2 JASPAR yes 27675200
chr1 27400896 27400911 STAT2 JASPAR yes 118257162
chr1 27400897 27400911 STAT1 JASPAR yes 27675201
chr1 27400897 27400911 STAT1 JASPAR yes 118257163
chr1 27400897 27400912 STAT2 JASPAR yes 27675202
chr1 27400897 27400912 STAT2 JASPAR yes 118257164
chr1 27400922 27400928 GATA3 JASPAR yes 27675203
chr1 27400922 27400928 GATA3 JASPAR yes 118257165
chr1 27400948 27400953 SP1 TRANSFAC yes 27675204
chr1 27400948 27400953 SP1 TRANSFAC yes 118257166
chr1 27400953 27400958 SP1 TRANSFAC yes 27675205
chr1 27400953 27400958 SP1 TRANSFAC yes 118257167
chr1 27400956 27400964 RHOXF1 JASPAR yes 27675206
chr1 27400956 27400964 RHOXF1 JASPAR yes 118257168
chr1 27400980 27400992 INSM1 JASPAR yes 27675207
chr1 27400980 27400992 INSM1 JASPAR yes 118257169
chr1 27400987 27400996 HIC2 JASPAR yes 27675208
chr1 27400987 27400996 HIC2 JASPAR yes 118257170
chr1 27400995 27401009 BATF3 JASPAR yes 27675209
chr1 27400995 27401009 BATF3 JASPAR yes 118257171
chr1 27401026 27401037 FOXA1 JASPAR yes 27675210
chr1 27401026 27401037 FOXA1 JASPAR yes 118257172
chr1 27401026 27401041 FOXA1 JASPAR yes 27675211
chr1 27401026 27401041 FOXA1 JASPAR yes 118257173
chr1 27401028 27401032 LFA1 TRANSFAC yes 27675212
chr1 27401028 27401032 LFA1 TRANSFAC yes 118257174
chr1 27401032 27401038 HiNF-A TRANSFAC yes 27675213
chr1 27401032 27401038 HiNF-A TRANSFAC yes 118257175
SNP sites on vista901[chr1:27400779-27401092]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27400987 rs562081323 C G
HIC2 INSM1
184000
chr1 27400990 rs376660535 GC G
HIC2 INSM1
184001
Genes possibly regulated by vista901[chr1:27400779-27401092]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27320198 27327389 + TRNP1 ENSG00000253368.3 27320198 0.89 0.99 382 19419
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 0.95 1.0 383 38548
chr1 27425306 27493472 - SLC9A1 ENSG00000090020.6 27493472 0.62 1.0 384 7620
Expression level of Genes
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miRNAs possibly regulated by vista901[chr1:27400779-27401092]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results