EnhancerDB
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  3. vista905[chr1:27519342-27519481]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista905[chr1:27519342-27519481]
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Tissue distribution of vista905
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Transcription factor that possibly regulate vista905[chr1:27519342-27519481]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27519329 27519343 TLX1 JASPAR yes 27684673
chr1 27519329 27519343 TLX1 JASPAR yes 118257276
chr1 27519366 27519370 LFA1 TRANSFAC yes 27684674
chr1 27519366 27519370 LFA1 TRANSFAC yes 118257277
chr1 27519390 27519402 POU2F1 JASPAR yes 27684675
chr1 27519390 27519402 POU2F1 JASPAR yes 118257278
chr1 27519390 27519403 POU3F3 JASPAR yes 27684676
chr1 27519390 27519403 POU3F3 JASPAR yes 118257279
chr1 27519390 27519404 POU1F1 JASPAR yes 27684677
chr1 27519390 27519404 POU1F1 JASPAR yes 118257280
chr1 27519391 27519403 POU3F1 JASPAR yes 27684678
chr1 27519391 27519403 POU3F2 JASPAR yes 27684679
chr1 27519391 27519403 POU3F1 JASPAR yes 118257281
chr1 27519391 27519403 POU3F2 JASPAR yes 118257282
chr1 27519391 27519404 POU2F2 JASPAR yes 27684680
chr1 27519391 27519404 POU2F2 JASPAR yes 118257283
chr1 27519392 27519401 POU3F4 JASPAR yes 27684681
chr1 27519392 27519401 POU5F1B JASPAR yes 27684682
chr1 27519392 27519401 POU3F4 JASPAR yes 118257284
chr1 27519392 27519401 POU5F1B JASPAR yes 118257285
chr1 27519397 27519407 TEAD4 JASPAR yes 27684683
chr1 27519397 27519407 TEAD4 JASPAR yes 118257286
chr1 27519400 27519413 SCRT2 JASPAR yes 27684684
chr1 27519400 27519413 SCRT2 JASPAR yes 118257287
chr1 27519400 27519415 SCRT1 JASPAR yes 27684685
chr1 27519400 27519415 SCRT1 JASPAR yes 118257288
chr1 27519414 27519425 BATF JASPAR yes 27684686
chr1 27519414 27519425 BATF JASPAR yes 118257289
chr1 27519415 27519426 FOSL2 JASPAR yes 27684687
chr1 27519415 27519426 FOSL2 JASPAR yes 118257290
chr1 27519416 27519427 FOS JASPAR yes 27684688
chr1 27519416 27519427 FOSL1 JASPAR yes 27684689
chr1 27519416 27519427 FOS JASPAR yes 118257291
chr1 27519416 27519427 FOSL1 JASPAR yes 118257292
chr1 27519417 27519426 JDP2 JASPAR yes 27684690
chr1 27519417 27519426 JDP2 JASPAR yes 118257293
chr1 27519417 27519428 JUNB JASPAR yes 27684691
chr1 27519417 27519428 JUNB JASPAR yes 118257294
chr1 27519417 27519431 JUN JASPAR yes 27684692
chr1 27519417 27519431 JUN JASPAR yes 118257295
chr1 27519418 27519429 BATF JASPAR yes 27684693
chr1 27519418 27519429 BATF JASPAR yes 118257296
chr1 27519423 27519427 YY1 TRANSFAC yes 27684694
chr1 27519423 27519427 YY1 TRANSFAC yes 118257297
chr1 27519445 27519466 ZNF263 JASPAR yes 27684695
chr1 27519445 27519466 ZNF263 JASPAR yes 118257298
chr1 27519449 27519464 PRDM1 JASPAR yes 27684696
chr1 27519449 27519464 PRDM1 JASPAR yes 118257299
chr1 27519456 27519466 SP1 JASPAR yes 27684697
chr1 27519456 27519466 SP1 JASPAR yes 118257300
SNP sites on vista905[chr1:27519342-27519481]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27519418 rs188009309 T C
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB
184851
Genes possibly regulated by vista905[chr1:27519342-27519481]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27425306 27493472 - SLC9A1 ENSG00000090020.6 27493472 0.62 1.0 384 74130
chr1 27561007 27635110 + WDTC1 ENSG00000142784.11 27561007 0.58 1.0 385 58474
Expression level of Genes
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miRNAs possibly regulated by vista905[chr1:27519342-27519481]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results