EnhancerDB
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  3. vista909[chr1:27626897-27627231]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista909[chr1:27626897-27627231]
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Tissue distribution of vista909
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Transcription factor that possibly regulate vista909[chr1:27626897-27627231]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27626880 27626900 TP53 JASPAR yes 27689810
chr1 27626880 27626900 TP53 JASPAR yes 118257363
chr1 27626886 27626906 TP53 JASPAR yes 27689811
chr1 27626886 27626906 TP53 JASPAR yes 118257364
chr1 27626893 27626913 RREB1 JASPAR yes 27689812
chr1 27626893 27626913 RREB1 JASPAR yes 118257365
chr1 27626937 27626948 E2F6 JASPAR yes 27689813
chr1 27626937 27626948 E2F6 JASPAR yes 118257366
chr1 27626938 27626943 SP1 TRANSFAC yes 27689814
chr1 27626938 27626943 SP1 TRANSFAC yes 118257367
chr1 27626951 27626969 ESR1 JASPAR yes 27689815
chr1 27626951 27626969 ESR1 JASPAR yes 118257368
chr1 27626952 27626967 ESR2 JASPAR yes 27689816
chr1 27626952 27626967 ESR2 JASPAR yes 118257369
chr1 27626960 27626974 RORA JASPAR yes 27689817
chr1 27626960 27626974 RORA JASPAR yes 118257370
chr1 27626961 27626971 RORA JASPAR yes 27689818
chr1 27626961 27626971 RORA JASPAR yes 118257371
chr1 27626963 27626984 IRF1 JASPAR yes 27689819
chr1 27626963 27626984 IRF1 JASPAR yes 118257372
chr1 27626964 27626985 ZNF263 JASPAR yes 27689820
chr1 27626964 27626985 ZNF263 JASPAR yes 118257373
chr1 27626965 27626980 PRDM1 JASPAR yes 27689821
chr1 27626965 27626980 PRDM1 JASPAR yes 118257374
chr1 27626967 27626979 IRF1 JASPAR yes 27689822
chr1 27626967 27626979 IRF1 JASPAR yes 118257375
chr1 27626967 27626988 ZNF263 JASPAR yes 27689823
chr1 27626967 27626988 ZNF263 JASPAR yes 118257376
chr1 27626968 27626986 IRF2 JASPAR yes 27689824
chr1 27626968 27626986 IRF2 JASPAR yes 118257377
chr1 27626969 27626990 IRF1 JASPAR yes 27689825
chr1 27626969 27626990 IRF1 JASPAR yes 118257378
chr1 27626971 27626982 ELK4 JASPAR yes 27689826
chr1 27626971 27626982 FLI1 JASPAR yes 27689827
chr1 27626971 27626982 ELK4 JASPAR yes 118257379
chr1 27626971 27626982 FLI1 JASPAR yes 118257380
chr1 27626971 27626984 ELF3 JASPAR yes 27689828
chr1 27626971 27626984 ELF3 JASPAR yes 118257381
chr1 27626971 27626986 STAT2 JASPAR yes 27689829
chr1 27626971 27626986 STAT2 JASPAR yes 118257382
chr1 27626972 27626982 ETV6 JASPAR yes 27689830
chr1 27626972 27626982 GABPA JASPAR yes 27689831
chr1 27626972 27626982 ETV6 JASPAR yes 118257383
chr1 27626972 27626982 GABPA JASPAR yes 118257384
chr1 27626972 27626983 ELF5 JASPAR yes 27689832
chr1 27626972 27626983 ETV2 JASPAR yes 27689833
chr1 27626972 27626983 ELF5 JASPAR yes 118257385
chr1 27626972 27626983 ETV2 JASPAR yes 118257386
chr1 27626972 27626984 EHF JASPAR yes 27689834
chr1 27626972 27626984 ELF1 JASPAR yes 27689835
chr1 27626972 27626984 ELF4 JASPAR yes 27689836
chr1 27626972 27626984 EHF JASPAR yes 118257387
chr1 27626972 27626984 ELF1 JASPAR yes 118257388
chr1 27626972 27626984 ELF4 JASPAR yes 118257389
chr1 27626972 27626985 ELF1 JASPAR yes 27689837
chr1 27626972 27626985 ELF1 JASPAR yes 118257390
chr1 27626972 27626986 SPI1 JASPAR yes 27689838
chr1 27626972 27626986 SPIC JASPAR yes 27689839
chr1 27626972 27626986 SPI1 JASPAR yes 118257391
chr1 27626972 27626986 SPIC JASPAR yes 118257392
chr1 27626973 27626980 SPI1 JASPAR yes 27689840
chr1 27626973 27626980 SPI1 JASPAR yes 118257393
chr1 27626973 27626981 EHF JASPAR yes 27689841
chr1 27626973 27626981 EHF JASPAR yes 118257394
chr1 27626973 27626994 ZNF263 JASPAR yes 27689842
chr1 27626973 27626994 ZNF263 JASPAR yes 118257395
chr1 27626975 27626982 SPIB JASPAR yes 27689843
chr1 27626975 27626982 SPIB JASPAR yes 118257396
chr1 27626975 27626996 ZNF263 JASPAR yes 27689844
chr1 27626975 27626996 ZNF263 JASPAR yes 118257397
chr1 27626976 27626997 ZNF263 JASPAR yes 27689845
chr1 27626976 27626997 ZNF263 JASPAR yes 118257398
chr1 27626984 27626994 SP1 JASPAR yes 27689846
chr1 27626984 27626994 SP1 JASPAR yes 118257399
chr1 27626990 27627000 MZF1 JASPAR yes 27689847
chr1 27626990 27627000 MZF1 JASPAR yes 118257400
chr1 27626991 27626997 MZF1 JASPAR yes 27689848
chr1 27626991 27626997 MZF1 JASPAR yes 118257401
chr1 27627004 27627025 ZNF263 JASPAR yes 27689849
chr1 27627004 27627025 ZNF263 JASPAR yes 118257402
chr1 27627007 27627028 ZNF263 JASPAR yes 27689850
chr1 27627007 27627028 ZNF263 JASPAR yes 118257403
chr1 27627011 27627032 ZNF263 JASPAR yes 27689851
chr1 27627011 27627032 ZNF263 JASPAR yes 118257404
chr1 27627033 27627054 ZNF263 JASPAR yes 27689852
chr1 27627033 27627054 ZNF263 JASPAR yes 118257405
chr1 27627051 27627056 TFAP2A TRANSFAC yes 27689853
chr1 27627051 27627056 TFAP2A TRANSFAC yes 118257406
chr1 27627051 27627057 MZF1 JASPAR yes 27689854
chr1 27627051 27627057 MZF1 JASPAR yes 118257407
chr1 27627083 27627104 ZNF263 JASPAR yes 27689855
chr1 27627083 27627104 ZNF263 JASPAR yes 118257408
chr1 27627102 27627120 MAFF JASPAR yes 27689856
chr1 27627102 27627120 MAFF JASPAR yes 118257409
chr1 27627104 27627119 MAFK JASPAR yes 27689857
chr1 27627104 27627119 MAFK JASPAR yes 118257410
chr1 27627104 27627125 MAFG JASPAR yes 27689858
chr1 27627104 27627125 MAFG JASPAR yes 118257411
chr1 27627110 27627117 JUN TRANSFAC yes 27689859
chr1 27627110 27627117 JUN TRANSFAC yes 118257412
chr1 27627124 27627128 NFE TRANSFAC yes 27689860
chr1 27627124 27627128 NFE TRANSFAC yes 118257413
chr1 27627133 27627143 SP1 JASPAR yes 27689861
chr1 27627133 27627143 SP1 JASPAR yes 118257414
chr1 27627145 27627156 EBF1 JASPAR yes 27689862
chr1 27627145 27627156 EBF1 JASPAR yes 118257415
chr1 27627161 27627173 NHLH1 JASPAR yes 27689863
chr1 27627161 27627173 NHLH1 JASPAR yes 118257416
chr1 27627162 27627172 MSC JASPAR yes 27689864
chr1 27627162 27627172 NHLH1 JASPAR yes 27689865
chr1 27627162 27627172 TFAP4 JASPAR yes 27689866
chr1 27627162 27627172 MSC JASPAR yes 118257417
chr1 27627162 27627172 NHLH1 JASPAR yes 118257418
chr1 27627162 27627172 TFAP4 JASPAR yes 118257419
chr1 27627172 27627178 ZNF354C JASPAR yes 27689867
chr1 27627172 27627178 ZNF354C JASPAR yes 118257420
chr1 27627173 27627192 PAX5 JASPAR yes 27689868
chr1 27627173 27627192 PAX5 JASPAR yes 118257421
chr1 27627176 27627193 PAX1 JASPAR yes 27689869
chr1 27627176 27627193 PAX9 JASPAR yes 27689870
chr1 27627176 27627193 PAX1 JASPAR yes 118257422
chr1 27627176 27627193 PAX9 JASPAR yes 118257423
chr1 27627187 27627204 RARA JASPAR yes 27689871
chr1 27627187 27627204 RARA JASPAR yes 118257424
chr1 27627188 27627203 ZIC3 JASPAR yes 27689872
chr1 27627188 27627203 ZIC4 JASPAR yes 27689873
chr1 27627188 27627203 ZIC3 JASPAR yes 118257425
chr1 27627188 27627203 ZIC4 JASPAR yes 118257426
chr1 27627188 27627204 GLIS1 JASPAR yes 27689874
chr1 27627188 27627204 GLIS1 JASPAR yes 118257427
chr1 27627189 27627203 ZIC1 JASPAR yes 27689875
chr1 27627189 27627203 ZIC1 JASPAR yes 118257428
chr1 27627191 27627201 ZNF740 JASPAR yes 27689876
chr1 27627191 27627201 ZNF740 JASPAR yes 118257429
chr1 27627192 27627202 SP1 JASPAR yes 27689877
chr1 27627192 27627202 ZNF740 JASPAR yes 27689878
chr1 27627192 27627202 SP1 JASPAR yes 118257430
chr1 27627192 27627202 ZNF740 JASPAR yes 118257431
chr1 27627203 27627215 TFAP2A JASPAR yes 27689879
chr1 27627203 27627215 TFAP2B JASPAR yes 27689880
chr1 27627203 27627215 TFAP2C JASPAR yes 27689881
chr1 27627203 27627215 TFAP2A JASPAR yes 118257432
chr1 27627203 27627215 TFAP2B JASPAR yes 118257433
chr1 27627203 27627215 TFAP2C JASPAR yes 118257434
chr1 27627226 27627230 ESR1 TRANSFAC yes 27689882
chr1 27627226 27627230 ESR1 TRANSFAC yes 118257435
SNP sites on vista909[chr1:27626897-27627231]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27626912 rs575832710 G A
RREB1
185245
Genes possibly regulated by vista909[chr1:27626897-27627231]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27561007 27635110 + WDTC1 ENSG00000142784.11 27561007 0.58 1.0 385 34110
chr1 27648651 27662891 + TMEM222 ENSG00000186501.10 27648651 0.55 1.0 386 78580
chr1 27668513 27680421 + SYTL1 ENSG00000142765.13 27668513 0.84 1.0 387 58718
chr1 27681675 27693383 - MAP3K6 ENSG00000142733.10 27693383 0.78 1.0 388 33848
chr1 27695603 27701315 - FCN3 ENSG00000142748.8 27701315 0.99 1.0 389 25916
chr1 27705666 27709870 - CD164L2 ENSG00000174950.6 27709870 0.92 1.0 390 17361
chr1 27719148 27722318 + GPR3 ENSG00000181773.6 27719148 0.8 1.0 391 8083
Expression level of Genes
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miRNAs possibly regulated by vista909[chr1:27626897-27627231]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results