EnhancerDB
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  3. vista910[chr1:27645553-27645918]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista910[chr1:27645553-27645918]
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Tissue distribution of vista910
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Transcription factor that possibly regulate vista910[chr1:27645553-27645918]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27645553 27645568 FOXP1 JASPAR yes 118257436
chr1 27645554 27645560 TBP TRANSFAC yes 118257437
chr1 27645554 27645569 FOXP1 JASPAR yes 118257438
chr1 27645554 27645575 IRF1 JASPAR yes 118257439
chr1 27645555 27645570 FOXP1 JASPAR yes 118257440
chr1 27645555 27645576 IRF1 JASPAR yes 118257441
chr1 27645556 27645571 FOXP1 JASPAR yes 118257442
chr1 27645556 27645577 IRF1 JASPAR yes 118257443
chr1 27645557 27645572 FOXP1 JASPAR yes 118257444
chr1 27645557 27645578 IRF1 JASPAR yes 118257445
chr1 27645558 27645573 FOXP1 JASPAR yes 118257446
chr1 27645558 27645579 IRF1 JASPAR yes 118257447
chr1 27645559 27645574 FOXP1 JASPAR yes 118257448
chr1 27645559 27645580 IRF1 JASPAR yes 118257449
chr1 27645560 27645575 FOXP1 JASPAR yes 118257450
chr1 27645560 27645581 IRF1 JASPAR yes 118257451
chr1 27645561 27645576 FOXP1 JASPAR yes 118257452
chr1 27645562 27645577 FOXP1 JASPAR yes 118257453
chr1 27645562 27645583 IRF1 JASPAR yes 118257454
chr1 27645563 27645578 FOXP1 JASPAR yes 118257455
chr1 27645564 27645579 FOXP1 JASPAR yes 118257456
chr1 27645580 27645600 ESR1 JASPAR yes 118257457
chr1 27645581 27645585 LFA1 TRANSFAC yes 118257458
chr1 27645602 27645623 LUN1 TRANSFAC yes 118257459
chr1 27645627 27645637 TCF3 JASPAR yes 118257460
chr1 27645631 27645648 RARA JASPAR yes 118257461
chr1 27645631 27645648 RXRA JASPAR yes 118257462
chr1 27645632 27645638 ZNF354C JASPAR yes 118257463
chr1 27645638 27645648 RORA JASPAR yes 118257464
chr1 27645639 27645650 ESRRA JASPAR yes 118257465
chr1 27645639 27645650 ESRRB JASPAR yes 118257466
chr1 27645639 27645652 NR2F1 JASPAR yes 118257467
chr1 27645641 27645649 NR4A2 JASPAR yes 118257468
chr1 27645641 27645659 RARA JASPAR yes 118257469
chr1 27645643 27645647 ESR1 TRANSFAC yes 118257470
chr1 27645648 27645663 LEF1 JASPAR yes 118257471
chr1 27645663 27645681 SRF JASPAR yes 118257472
chr1 27645665 27645681 SRF JASPAR yes 118257473
chr1 27645674 27645685 CEBPB JASPAR yes 118257474
chr1 27645675 27645688 NFKB1 JASPAR yes 118257475
chr1 27645675 27645688 NFKB2 JASPAR yes 118257476
chr1 27645691 27645706 MEF2C JASPAR yes 118257477
chr1 27645692 27645707 MEF2A JASPAR yes 118257478
chr1 27645693 27645705 MEF2A JASPAR yes 118257479
chr1 27645693 27645705 MEF2B JASPAR yes 118257480
chr1 27645693 27645705 MEF2D JASPAR yes 118257481
chr1 27645708 27645728 RREB1 JASPAR yes 118257482
chr1 27645710 27645729 REST JASPAR yes 118257483
chr1 27645712 27645727 RUNX2 JASPAR yes 118257484
chr1 27645727 27645736 ZEB1 JASPAR yes 118257485
chr1 27645728 27645738 ID4 JASPAR yes 118257486
chr1 27645728 27645738 TCF3 JASPAR yes 118257487
chr1 27645728 27645738 TCF4 JASPAR yes 118257488
chr1 27645729 27645738 SNAI2 JASPAR yes 118257489
chr1 27645730 27645735 USF2 TRANSFAC yes 118257490
chr1 27645750 27645771 ZNF263 JASPAR yes 118257491
chr1 27645779 27645795 ZNF143 JASPAR yes 118257492
chr1 27645785 27645799 RXRB JASPAR yes 118257493
chr1 27645785 27645799 RXRG JASPAR yes 118257494
chr1 27645828 27645843 RFX5 JASPAR yes 118257495
chr1 27645851 27645855 NFE TRANSFAC yes 118257496
chr1 27645855 27645870 FOXP1 JASPAR yes 118257497
chr1 27645856 27645871 FOXP1 JASPAR yes 118257498
chr1 27645857 27645872 FOXP1 JASPAR yes 118257499
chr1 27645857 27645878 IRF1 JASPAR yes 118257500
chr1 27645858 27645873 FOXP1 JASPAR yes 118257501
chr1 27645858 27645879 IRF1 JASPAR yes 118257502
chr1 27645859 27645874 FOXP1 JASPAR yes 118257503
chr1 27645859 27645880 IRF1 JASPAR yes 118257504
chr1 27645860 27645875 FOXP1 JASPAR yes 118257505
chr1 27645860 27645881 IRF1 JASPAR yes 118257506
chr1 27645861 27645876 FOXP1 JASPAR yes 118257507
chr1 27645861 27645882 IRF1 JASPAR yes 118257508
chr1 27645862 27645877 FOXP1 JASPAR yes 118257509
chr1 27645862 27645883 IRF1 JASPAR yes 118257510
chr1 27645863 27645878 FOXP1 JASPAR yes 118257511
chr1 27645863 27645884 IRF1 JASPAR yes 118257512
chr1 27645864 27645879 FOXP1 JASPAR yes 118257513
chr1 27645864 27645885 IRF1 JASPAR yes 118257514
chr1 27645865 27645880 FOXP1 JASPAR yes 118257515
chr1 27645865 27645886 IRF1 JASPAR yes 118257516
chr1 27645866 27645881 FOXP1 JASPAR yes 118257517
chr1 27645866 27645887 IRF1 JASPAR yes 118257518
chr1 27645867 27645882 FOXP1 JASPAR yes 118257519
chr1 27645867 27645888 IRF1 JASPAR yes 118257520
chr1 27645868 27645883 FOXP1 JASPAR yes 118257521
chr1 27645869 27645884 FOXP1 JASPAR yes 118257522
chr1 27645869 27645890 IRF1 JASPAR yes 118257523
chr1 27645870 27645885 FOXP1 JASPAR yes 118257524
chr1 27645871 27645886 FOXP1 JASPAR yes 118257525
chr1 27645884 27645904 RREB1 JASPAR yes 118257526
chr1 27645889 27645895 ZNF354C JASPAR yes 118257527
chr1 27645889 27645909 RREB1 JASPAR yes 118257528
chr1 27645891 27645911 RREB1 JASPAR yes 118257529
chr1 27645908 27645912 LFA1 TRANSFAC yes 118257530
SNP sites on vista910[chr1:27645553-27645918]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27645629 rs556766015 G A
TCF3
185266
chr1 27645820 rs549999639 A G no 185267
Genes possibly regulated by vista910[chr1:27645553-27645918]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27561007 27635110 + WDTC1 ENSG00000142784.11 27561007 0.58 1.0 385 15454
chr1 27648651 27662891 + TMEM222 ENSG00000186501.10 27648651 0.55 1.0 386 97267
chr1 27668513 27680421 + SYTL1 ENSG00000142765.13 27668513 0.84 1.0 387 77405
chr1 27681675 27693383 - MAP3K6 ENSG00000142733.10 27693383 0.78 1.0 388 52535
chr1 27695603 27701315 - FCN3 ENSG00000142748.8 27701315 0.99 1.0 389 44603
chr1 27705666 27709870 - CD164L2 ENSG00000174950.6 27709870 0.92 1.0 390 36048
chr1 27719148 27722318 + GPR3 ENSG00000181773.6 27719148 0.8 1.0 391 26770
Expression level of Genes
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miRNAs possibly regulated by vista910[chr1:27645553-27645918]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results