EnhancerDB
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  3. vista9376[chr11:1875708-1876088]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9376[chr11:1875708-1876088]
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Tissue distribution of vista9376
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Transcription factor that possibly regulate vista9376[chr11:1875708-1876088]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952182
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952183
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952184
chr11 1875780 1876075 EBF1 UCSC Txn Factor no Conserved 107952202
chr11 1875842 1876102 TCF12 UCSC Txn Factor no Conserved 107952208
chr11 1875933 1876152 SRF UCSC Txn Factor no Conserved 107952225
chr11 1875718 1875730 TEAD1 JASPAR yes 114029074
chr11 1875719 1875735 GLIS1 JASPAR yes 114029075
chr11 1875724 1875744 RREB1 JASPAR yes 114029076
chr11 1875737 1875748 TBX20 JASPAR yes 114029077
chr11 1875771 1875777 NFIC JASPAR yes 114029078
chr11 1875789 1875798 SNAI2 JASPAR yes 114029079
chr11 1875789 1875799 ID4 JASPAR yes 114029080
chr11 1875789 1875799 TCF3 JASPAR yes 114029081
chr11 1875789 1875799 TCF4 JASPAR yes 114029082
chr11 1875791 1875800 ZEB1 JASPAR yes 114029083
chr11 1875792 1875806 GLIS2 JASPAR yes 114029084
chr11 1875794 1875804 ZNF740 JASPAR yes 114029085
chr11 1875800 1875805 SP1 TRANSFAC yes 114029086
chr11 1875822 1875836 MTF1 JASPAR yes 114029087
chr11 1875861 1875873 TFAP2A JASPAR yes 114029088
chr11 1875861 1875873 TFAP2B JASPAR yes 114029089
chr11 1875861 1875873 TFAP2C JASPAR yes 114029090
chr11 1875867 1875877 SP1 JASPAR yes 114029091
chr11 1875890 1875905 RFX5 JASPAR yes 114029092
chr11 1875890 1875905 TFAP2C JASPAR yes 114029093
chr11 1875891 1875895 NFE TRANSFAC yes 114029094
chr11 1875892 1875906 EBF1 JASPAR yes 114029095
chr11 1875893 1875904 EBF1 JASPAR yes 114029096
chr11 1875894 1875900 MZF1 JASPAR yes 114029097
chr11 1875905 1875913 TBX15 JASPAR yes 114029098
chr11 1875905 1875916 E2F6 JASPAR yes 114029099
chr11 1875906 1875911 SP1 TRANSFAC yes 114029100
chr11 1875907 1875927 ESR1 JASPAR yes 114029101
chr11 1875959 1875971 TAL1 JASPAR yes 114029102
chr11 1875960 1875972 NHLH1 JASPAR yes 114029103
chr11 1875960 1875973 ZBTB18 JASPAR yes 114029104
chr11 1875961 1875971 FIGLA JASPAR yes 114029105
chr11 1875961 1875971 MSC JASPAR yes 114029106
chr11 1875961 1875971 MYF6 JASPAR yes 114029107
chr11 1875961 1875971 NHLH1 JASPAR yes 114029108
chr11 1875961 1875971 TFAP4 JASPAR yes 114029109
chr11 1875972 1875982 NHLH1 JASPAR yes 114029110
chr11 1875994 1875998 NFE TRANSFAC yes 36973298
chr11 1875994 1875998 NFE TRANSFAC yes 114029111
chr11 1875996 1876017 REST JASPAR yes 36973299
chr11 1875996 1876017 REST JASPAR yes 114029112
chr11 1875997 1876016 REST JASPAR yes 36973300
chr11 1875997 1876016 REST JASPAR yes 114029113
chr11 1876004 1876016 INSM1 JASPAR yes 36973301
chr11 1876004 1876016 INSM1 JASPAR yes 114029114
chr11 1876011 1876032 REST JASPAR yes 36973302
chr11 1876011 1876032 REST JASPAR yes 114029115
chr11 1876012 1876031 REST JASPAR yes 36973303
chr11 1876012 1876031 REST JASPAR yes 114029116
chr11 1876035 1876039 ESR1 TRANSFAC yes 36973304
chr11 1876035 1876039 ESR1 TRANSFAC yes 114029117
chr11 1876036 1876046 SREBF1 JASPAR yes 36973305
chr11 1876036 1876046 SREBF2 JASPAR yes 36973306
chr11 1876036 1876046 SREBF1 JASPAR yes 114029118
chr11 1876036 1876046 SREBF2 JASPAR yes 114029119
chr11 1876043 1876061 SRF JASPAR yes 36973307
chr11 1876043 1876061 SRF JASPAR yes 114029120
chr11 1876045 1876061 SRF JASPAR yes 36973308
chr11 1876045 1876061 SRF JASPAR yes 114029121
chr11 1876056 1876060 LFA1 TRANSFAC yes 36973309
chr11 1876056 1876060 LFA1 TRANSFAC yes 114029122
chr11 1876065 1876080 TFAP2A JASPAR yes 36973310
chr11 1876065 1876080 TFAP2A JASPAR yes 114029123
chr11 1876079 1876092 NFKB1 JASPAR yes 36973311
chr11 1876079 1876092 NFKB2 JASPAR yes 36973312
chr11 1876079 1876092 NFKB1 JASPAR yes 114029124
chr11 1876079 1876092 NFKB2 JASPAR yes 114029125
chr11 1876080 1876091 NFKB1 JASPAR yes 36973313
chr11 1876080 1876091 NFKB1 JASPAR yes 114029126
chr11 1876081 1876085 LFA1 TRANSFAC yes 36973314
chr11 1876081 1876085 LFA1 TRANSFAC yes 114029127
chr11 1876083 1876104 ZNF263 JASPAR yes 36973315
chr11 1876083 1876104 ZNF263 JASPAR yes 114029128
chr11 1876087 1876093 SP1 TRANSFAC yes 36973316
chr11 1876087 1876093 SP1 TRANSFAC yes 114029129
chr11 1876087 1876097 SP1 JASPAR yes 36973317
chr11 1876087 1876097 SP1 JASPAR yes 114029130
SNP sites on vista9376[chr11:1875708-1876088]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 1875748 rs577254760 G A
POLR2A TBX20
1797426
chr11 1875811 rs116368858 A G
EBF1 POLR2A
1797427
chr11 1875883 rs568210193 C A,T
EBF1 POLR2A TCF12
1797428
chr11 1875886 rs72843931 C T
EBF1 POLR2A TCF12
1797429
chr11 1875986 rs143944521 C T
EBF1 POLR2A SRF TCF12
1797430
chr11 1875991 rs10743028 C T
EBF1 POLR2A SRF TCF12
1797431
Genes possibly regulated by vista9376[chr11:1875708-1876088]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 1768897 1780281 - RP11-295K3.1 ENSG00000250644.1 1780281 0.95 0.8 10400 4573
chr11 1773982 1785222 - CTSD ENSG00000117984.8 1785222 0.74 0.98 10401 9514
chr11 1848709 1858751 + SYT8 ENSG00000149043.12 1848709 0.93 1.0 10402 73001
chr11 1860219 1862910 + TNNI2 ENSG00000130598.11 1860219 0.86 0.96 10403 84511
chr11 1874200 1913497 + LSP1 ENSG00000130592.9 1874200 0.9 0.9 10404 98492
chr11 1910375 1912084 - C11orf89 ENSG00000184682.5 1912084 0.95 1.0 10405 64004
chr11 1940792 1959936 + TNNT3 ENSG00000130595.12 1940792 0.87 1.0 10406 35296
chr11 1968508 2005752 + MRPL23 ENSG00000214026.6 1968508 0.75 0.99 10407 7580
Expression level of Genes
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miRNAs possibly regulated by vista9376[chr11:1875708-1876088]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results