EnhancerDB
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  3. vista9377[chr11:1876283-1876611]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9377[chr11:1876283-1876611]
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Tissue distribution of vista9377
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Transcription factor that possibly regulate vista9377[chr11:1876283-1876611]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952182
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952183
chr11 1873818 1877738 POLR2A UCSC Txn Factor no Conserved 107952184
chr11 1876178 1876647 NFIC UCSC Txn Factor no Conserved 107952255
chr11 1876192 1876624 RUNX3 UCSC Txn Factor no Conserved 107952257
chr11 1876220 1876564 PAX5 UCSC Txn Factor no Conserved 107952265
chr11 1876263 1876667 RELA UCSC Txn Factor no Conserved 107952282
chr11 1876329 1876524 BATF UCSC Txn Factor no Conserved 107952311
chr11 1876294 1876305 EBF1 JASPAR yes 36973354
chr11 1876294 1876305 EBF1 JASPAR yes 114029131
chr11 1876307 1876313 TCF4 TRANSFAC yes 36973355
chr11 1876307 1876313 TCF4 TRANSFAC yes 114029132
chr11 1876321 1876327 SP1 TRANSFAC yes 36973356
chr11 1876321 1876327 SP1 TRANSFAC yes 114029133
chr11 1876329 1876340 NFKB1 JASPAR yes 36973357
chr11 1876329 1876340 NFKB1 JASPAR yes 114029134
chr11 1876330 1876340 NFKB1 JASPAR yes 36973358
chr11 1876330 1876340 NFKB1 JASPAR yes 114029135
chr11 1876336 1876346 SP1 JASPAR yes 36973359
chr11 1876336 1876346 SP1 JASPAR yes 114029136
chr11 1876337 1876347 SP1 JASPAR yes 36973360
chr11 1876337 1876347 SP1 JASPAR yes 114029137
chr11 1876339 1876345 NFE2 TRANSFAC yes 36973361
chr11 1876339 1876345 NFE2 TRANSFAC yes 114029138
chr11 1876361 1876380 PAX5 JASPAR yes 36973362
chr11 1876361 1876380 PAX5 JASPAR yes 114029139
chr11 1876364 1876381 PAX9 JASPAR yes 36973363
chr11 1876364 1876381 PAX9 JASPAR yes 114029140
chr11 1876375 1876383 NR4A2 JASPAR yes 36973364
chr11 1876375 1876383 NR4A2 JASPAR yes 114029141
chr11 1876385 1876406 IRF1 JASPAR yes 36973365
chr11 1876385 1876406 IRF1 JASPAR yes 114029142
chr11 1876387 1876402 IRF9 JASPAR yes 36973366
chr11 1876387 1876402 IRF9 JASPAR yes 114029143
chr11 1876388 1876402 IRF8 JASPAR yes 36973367
chr11 1876388 1876402 IRF8 JASPAR yes 114029144
chr11 1876398 1876412 PLAG1 JASPAR yes 36973368
chr11 1876398 1876412 PLAG1 JASPAR yes 114029145
chr11 1876421 1876425 YY1 TRANSFAC yes 36973369
chr11 1876421 1876425 YY1 TRANSFAC yes 114029146
chr11 1876427 1876441 JUN JASPAR yes 36973370
chr11 1876427 1876441 JUN JASPAR yes 114029147
chr11 1876430 1876441 FOSL2 JASPAR yes 36973371
chr11 1876430 1876441 JUNB JASPAR yes 36973372
chr11 1876430 1876441 FOSL2 JASPAR yes 114029148
chr11 1876430 1876441 JUNB JASPAR yes 114029149
chr11 1876431 1876442 FOSL1 JASPAR yes 36973373
chr11 1876431 1876442 FOSL1 JASPAR yes 114029150
chr11 1876431 1876447 RFX5 JASPAR yes 36973374
chr11 1876431 1876447 RFX5 JASPAR yes 114029151
chr11 1876432 1876439 JUN TRANSFAC yes 36973375
chr11 1876432 1876439 JUN TRANSFAC yes 114029152
chr11 1876447 1876458 NFKB1 JASPAR yes 36973376
chr11 1876447 1876458 NFKB1 JASPAR yes 114029153
chr11 1876448 1876458 NFKB1 JASPAR yes 36973377
chr11 1876448 1876458 RELA JASPAR yes 36973378
chr11 1876448 1876458 REL JASPAR yes 36973379
chr11 1876448 1876458 NFKB1 JASPAR yes 114029154
chr11 1876448 1876458 RELA JASPAR yes 114029155
chr11 1876448 1876458 REL JASPAR yes 114029156
chr11 1876448 1876459 NFKB1 JASPAR yes 36973380
chr11 1876448 1876459 NFKB1 JASPAR yes 114029157
chr11 1876451 1876462 ETV2 JASPAR yes 36973381
chr11 1876451 1876462 ETV2 JASPAR yes 114029158
chr11 1876457 1876461 NFE TRANSFAC yes 36973382
chr11 1876457 1876461 NFE TRANSFAC yes 114029159
chr11 1876508 1876519 NFKB1 JASPAR yes 36973383
chr11 1876508 1876519 NFKB1 JASPAR yes 114029160
chr11 1876509 1876514 ETS2 TRANSFAC yes 36973384
chr11 1876509 1876514 ETS2 TRANSFAC yes 114029161
chr11 1876509 1876519 NFKB1 JASPAR yes 36973385
chr11 1876509 1876519 RELA JASPAR yes 36973386
chr11 1876509 1876519 NFKB1 JASPAR yes 114029162
chr11 1876509 1876519 RELA JASPAR yes 114029163
chr11 1876509 1876520 NFKB1 JASPAR yes 36973387
chr11 1876509 1876520 NFKB1 JASPAR yes 114029164
chr11 1876524 1876534 NFKB1 JASPAR yes 36973388
chr11 1876524 1876534 NFKB1 JASPAR yes 114029165
chr11 1876524 1876535 NFKB1 JASPAR yes 36973389
chr11 1876524 1876535 NFKB1 JASPAR yes 114029166
chr11 1876529 1876535 MZF1 JASPAR yes 36973390
chr11 1876529 1876535 MZF1 JASPAR yes 114029167
chr11 1876532 1876539 ETS1 TRANSFAC yes 36973391
chr11 1876532 1876539 ETS1 TRANSFAC yes 114029168
chr11 1876533 1876541 EHF JASPAR yes 36973392
chr11 1876533 1876541 EHF JASPAR yes 114029169
chr11 1876548 1876559 NRF1 JASPAR yes 36973393
chr11 1876548 1876559 NRF1 JASPAR yes 114029170
chr11 1876548 1876568 ESR1 JASPAR yes 36973394
chr11 1876548 1876568 ESR1 JASPAR yes 114029171
chr11 1876549 1876553 LFA1 TRANSFAC yes 36973395
chr11 1876549 1876553 LFA1 TRANSFAC yes 114029172
chr11 1876555 1876567 NHLH1 JASPAR yes 36973396
chr11 1876555 1876567 NHLH1 JASPAR yes 114029173
chr11 1876556 1876566 NHLH1 JASPAR yes 36973397
chr11 1876556 1876566 NHLH1 JASPAR yes 114029174
SNP sites on vista9377[chr11:1876283-1876611]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 1876289 rs557116460 C T
NFIC PAX5 POLR2A RELA RUNX3
1797439
chr11 1876321 rs546207776 C A
NFIC PAX5 POLR2A RELA RUNX3 SP1
1797440
chr11 1876401 rs74047611 G A,T
BATF IRF1 IRF8 IRF9 NFIC PAX5 PLAG1 POLR2A RELA RUNX3
1797441
chr11 1876486 rs192230812 C A,T
BATF NFIC PAX5 POLR2A RELA RUNX3
1797442
chr11 1876554 rs11041481 A G
ESR1 NFIC NRF1 PAX5 POLR2A RELA RUNX3
1797443
chr11 1876594 rs4980395 C T
NFIC POLR2A RELA RUNX3
1797444
chr11 1876595 rs10839821 G A
NFIC POLR2A RELA RUNX3
1797445
Genes possibly regulated by vista9377[chr11:1876283-1876611]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 1768897 1780281 - RP11-295K3.1 ENSG00000250644.1 1780281 0.95 0.8 10400 3998
chr11 1773982 1785222 - CTSD ENSG00000117984.8 1785222 0.74 0.98 10401 8939
chr11 1848709 1858751 + SYT8 ENSG00000149043.12 1848709 0.93 1.0 10402 72426
chr11 1860219 1862910 + TNNI2 ENSG00000130598.11 1860219 0.86 0.96 10403 83936
chr11 1874200 1913497 + LSP1 ENSG00000130592.9 1874200 0.9 0.9 10404 97917
chr11 1910375 1912084 - C11orf89 ENSG00000184682.5 1912084 0.95 1.0 10405 64527
chr11 1940792 1959936 + TNNT3 ENSG00000130595.12 1940792 0.87 1.0 10406 35819
chr11 1968508 2005752 + MRPL23 ENSG00000214026.6 1968508 0.75 0.99 10407 8103
Expression level of Genes
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miRNAs possibly regulated by vista9377[chr11:1876283-1876611]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results