EnhancerDB
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  3. vista938[chr1:27935491-27936061]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista938[chr1:27935491-27936061]
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Tissue distribution of vista938
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Transcription factor that possibly regulate vista938[chr1:27935491-27936061]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27935492 27935512 RREB1 JASPAR yes 118259188
chr1 27935494 27935514 RREB1 JASPAR yes 118259189
chr1 27935496 27935516 RREB1 JASPAR yes 118259190
chr1 27935498 27935518 RREB1 JASPAR yes 118259191
chr1 27935500 27935520 RREB1 JASPAR yes 118259192
chr1 27935502 27935522 RREB1 JASPAR yes 118259193
chr1 27935504 27935524 RREB1 JASPAR yes 118259194
chr1 27935506 27935526 RREB1 JASPAR yes 118259195
chr1 27935508 27935528 RREB1 JASPAR yes 118259196
chr1 27935510 27935530 RREB1 JASPAR yes 118259197
chr1 27935512 27935532 RREB1 JASPAR yes 118259198
chr1 27935514 27935534 RREB1 JASPAR yes 118259199
chr1 27935516 27935536 RREB1 JASPAR yes 118259200
chr1 27935518 27935538 RREB1 JASPAR yes 118259201
chr1 27935572 27935578 ZNF354C JASPAR yes 118259202
chr1 27935620 27935626 MZF1 JASPAR yes 118259203
chr1 27935638 27935642 H4TF2 TRANSFAC yes 118259204
chr1 27935647 27935652 H4TF1 TRANSFAC yes 118259205
chr1 27935650 27935671 IRF1 JASPAR yes 118259206
chr1 27935652 27935667 STAT2 JASPAR yes 118259207
chr1 27935653 27935667 STAT1 JASPAR yes 118259208
chr1 27935663 27935669 MZF1 JASPAR yes 118259209
chr1 27935689 27935699 RELA JASPAR yes 118259210
chr1 27935690 27935701 NFKB1 JASPAR yes 118259211
chr1 27935693 27935714 ZNF263 JASPAR yes 118259212
chr1 27935695 27935705 MZF1 JASPAR yes 118259213
chr1 27935697 27935718 ZNF263 JASPAR yes 118259214
chr1 27935698 27935704 SP1 TRANSFAC yes 118259215
chr1 27935698 27935708 SP1 JASPAR yes 118259216
chr1 27935713 27935734 ZNF263 JASPAR yes 118259217
chr1 27935717 27935724 JUN TRANSFAC yes 118259218
chr1 27935740 27935751 NFE2 JASPAR yes 118259219
chr1 27935753 27935767 PLAG1 JASPAR yes 118259220
chr1 27935771 27935781 POU6F2 JASPAR yes 118259221
chr1 27935772 27935782 EMX1 JASPAR yes 118259222
chr1 27935772 27935782 EMX2 JASPAR yes 118259223
chr1 27935772 27935782 EVX1 JASPAR yes 118259224
chr1 27935772 27935782 EVX2 JASPAR yes 118259225
chr1 27935772 27935782 GSX1 JASPAR yes 118259226
chr1 27935772 27935782 HOXB2 JASPAR yes 118259227
chr1 27935772 27935782 HOXB3 JASPAR yes 118259228
chr1 27935772 27935782 LHX2 JASPAR yes 118259229
chr1 27935772 27935782 LHX6 JASPAR yes 118259230
chr1 27935772 27935782 MEOX1 JASPAR yes 118259231
chr1 27935772 27935782 POU6F1 JASPAR yes 118259232
chr1 27935773 27935781 LBX1 JASPAR yes 118259233
chr1 27935773 27935781 PDX1 JASPAR yes 118259234
chr1 27935773 27935781 VAX1 JASPAR yes 118259235
chr1 27935773 27935781 VAX2 JASPAR yes 118259236
chr1 27935773 27935781 VSX1 JASPAR yes 118259237
chr1 27935773 27935781 VSX2 JASPAR yes 118259238
chr1 27935778 27935788 NFIA JASPAR yes 118259239
chr1 27935780 27935786 NFIC JASPAR yes 118259240
chr1 27935781 27935793 HES5 JASPAR yes 118259241
chr1 27935781 27935793 HES7 JASPAR yes 118259242
chr1 27935813 27935825 BHLHE23 JASPAR yes 118259243
chr1 27935814 27935824 BHLHE22 JASPAR yes 118259244
chr1 27935814 27935824 NEUROD2 JASPAR yes 118259245
chr1 27935814 27935824 OLIG2 JASPAR yes 118259246
chr1 27935814 27935824 OLIG3 JASPAR yes 118259247
chr1 27935824 27935839 HNF4A JASPAR yes 118259248
chr1 27935825 27935839 NR2F1 JASPAR yes 118259249
chr1 27935825 27935840 HNF4G JASPAR yes 118259250
chr1 27935831 27935848 NR3C1 JASPAR yes 118259251
chr1 27935831 27935848 NR3C2 JASPAR yes 118259252
chr1 27935833 27935848 AR JASPAR yes 118259253
chr1 27935840 27935859 CTCF JASPAR yes 118259254
chr1 27935854 27935869 JUND JASPAR yes 118259255
chr1 27935855 27935868 JUN JASPAR yes 118259256
chr1 27935856 27935870 ATF7 JASPAR yes 118259257
chr1 27935857 27935869 JDP2 JASPAR yes 118259258
chr1 27935857 27935872 JUND JASPAR yes 118259259
chr1 27935858 27935871 JUN JASPAR yes 118259260
chr1 27935859 27935867 CREB1 JASPAR yes 118259261
chr1 27935861 27935882 ZNF263 JASPAR yes 118259262
chr1 27935896 27935900 YY1 TRANSFAC yes 118259263
chr1 27935912 27935922 NFKB1 JASPAR yes 118259264
chr1 27935938 27935949 ESRRA JASPAR yes 118259265
chr1 27935938 27935949 ESRRB JASPAR yes 118259266
chr1 27935939 27935947 NR4A2 JASPAR yes 118259267
chr1 27935951 27935960 NKX3-2 JASPAR yes 118259268
chr1 27935960 27935976 SOX8 JASPAR yes 118259269
chr1 27935961 27935970 SOX9 JASPAR yes 118259270
chr1 27935961 27935976 FOXA1 JASPAR yes 118259271
chr1 27935962 27935977 FOXP1 JASPAR yes 118259272
chr1 27935963 27935972 SRY JASPAR yes 118259273
chr1 27935963 27935974 FOXP2 JASPAR yes 118259274
chr1 27935963 27935975 FOXC2 JASPAR yes 118259275
chr1 27935963 27935977 FOXF2 JASPAR yes 118259276
chr1 27935964 27935972 FOXD1 JASPAR yes 118259277
chr1 27935964 27935972 FOXG1 JASPAR yes 118259278
chr1 27935964 27935972 FOXO3 JASPAR yes 118259279
chr1 27935965 27935972 FOXD2 JASPAR yes 118259280
chr1 27935965 27935972 FOXI1 JASPAR yes 118259281
chr1 27935965 27935972 FOXL1 JASPAR yes 118259282
chr1 27935965 27935972 FOXO4 JASPAR yes 118259283
chr1 27935965 27935972 FOXO6 JASPAR yes 118259284
chr1 27935965 27935972 FOXP3 JASPAR yes 118259285
chr1 27935965 27935976 FOXA1 JASPAR yes 118259286
chr1 27936018 27936031 EOMES JASPAR yes 118259287
chr1 27936019 27936029 TBR1 JASPAR yes 118259288
chr1 27936027 27936042 HNF1A JASPAR yes 118259289
chr1 27936028 27936041 HNF1B JASPAR yes 118259290
chr1 27936047 27936057 HOXC10 JASPAR yes 118259291
chr1 27936047 27936057 HOXD11 JASPAR yes 118259292
chr1 27936047 27936058 HOXC11 JASPAR yes 118259293
chr1 27936047 27936058 HOXC12 JASPAR yes 118259294
chr1 27936047 27936058 HOXC13 JASPAR yes 118259295
chr1 27936047 27936058 HOXD12 JASPAR yes 118259296
SNP sites on vista938[chr1:27935491-27936061]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27935497 rs371063468 GGT G
RREB1
187371
chr1 27935782 rs75306602 T C
EMX1 EMX2 EVX1 EVX2 GSX1 HES5 HES7 HOXB2 HOXB3 LHX2 LHX6 MEOX1 NFIA NFIC POU6F1
187372
chr1 27935810 rs116791856 A T no 187373
chr1 27935829 rs144467048 C T
HNF4A HNF4G NR2F1
187374
Genes possibly regulated by vista938[chr1:27935491-27936061]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 95451
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 74273
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 37332
Expression level of Genes
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miRNAs possibly regulated by vista938[chr1:27935491-27936061]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results