EnhancerDB
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  3. vista940[chr1:27959091-27959724]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista940[chr1:27959091-27959724]
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Tissue distribution of vista940
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Transcription factor that possibly regulate vista940[chr1:27959091-27959724]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27959081 27959096 HNF4A JASPAR yes 27716920
chr1 27959081 27959096 HNF4A JASPAR yes 118259516
chr1 27959082 27959096 NR2F1 JASPAR yes 27716921
chr1 27959082 27959096 RXRB JASPAR yes 27716922
chr1 27959082 27959096 RXRG JASPAR yes 27716923
chr1 27959082 27959096 NR2F1 JASPAR yes 118259517
chr1 27959082 27959096 RXRB JASPAR yes 118259518
chr1 27959082 27959096 RXRG JASPAR yes 118259519
chr1 27959082 27959097 HNF4G JASPAR yes 27716924
chr1 27959082 27959097 NR2C2 JASPAR yes 27716925
chr1 27959082 27959097 HNF4G JASPAR yes 118259520
chr1 27959082 27959097 NR2C2 JASPAR yes 118259521
chr1 27959089 27959103 GLIS3 JASPAR yes 27716926
chr1 27959089 27959103 GLIS3 JASPAR yes 118259522
chr1 27959095 27959105 MAX JASPAR yes 27716927
chr1 27959095 27959105 MAX JASPAR yes 118259523
chr1 27959095 27959107 GLI2 JASPAR yes 27716928
chr1 27959095 27959107 GLI2 JASPAR yes 118259524
chr1 27959101 27959105 H4TF2 TRANSFAC yes 27716929
chr1 27959101 27959105 H4TF2 TRANSFAC yes 118259525
chr1 27959112 27959116 YY1 TRANSFAC yes 27716930
chr1 27959112 27959116 YY1 TRANSFAC yes 118259526
chr1 27959122 27959132 NFATC3 JASPAR yes 27716931
chr1 27959122 27959132 NFATC3 JASPAR yes 118259527
chr1 27959123 27959130 NFATC2 JASPAR yes 27716932
chr1 27959123 27959130 NFATC2 JASPAR yes 118259528
chr1 27959146 27959156 RELA JASPAR yes 27716933
chr1 27959146 27959156 RELA JASPAR yes 118259529
chr1 27959150 27959157 NFATC2 JASPAR yes 27716934
chr1 27959150 27959157 NFATC2 JASPAR yes 118259530
chr1 27959152 27959167 SCRT1 JASPAR yes 27716935
chr1 27959152 27959167 SCRT1 JASPAR yes 118259531
chr1 27959153 27959163 FIGLA JASPAR yes 27716936
chr1 27959153 27959163 MSC JASPAR yes 27716937
chr1 27959153 27959163 FIGLA JASPAR yes 118259532
chr1 27959153 27959163 MSC JASPAR yes 118259533
chr1 27959154 27959163 SNAI2 JASPAR yes 27716938
chr1 27959154 27959163 SNAI2 JASPAR yes 118259534
chr1 27959154 27959167 SCRT2 JASPAR yes 27716939
chr1 27959154 27959167 SCRT2 JASPAR yes 118259535
chr1 27959155 27959160 USF2 TRANSFAC yes 27716940
chr1 27959155 27959160 USF2 TRANSFAC yes 118259536
chr1 27959156 27959162 PTF TRANSFAC yes 27716941
chr1 27959156 27959162 PTF TRANSFAC yes 118259537
chr1 27959168 27959188 RREB1 JASPAR yes 27716942
chr1 27959168 27959188 RREB1 JASPAR yes 118259538
chr1 27959188 27959194 HiNF-A TRANSFAC yes 27716943
chr1 27959188 27959194 HiNF-A TRANSFAC yes 118259539
chr1 27959191 27959201 MSC JASPAR yes 27716944
chr1 27959191 27959201 MSC JASPAR yes 118259540
chr1 27959206 27959212 YY1 JASPAR yes 27716945
chr1 27959206 27959212 YY1 JASPAR yes 118259541
chr1 27959206 27959216 NEUROG2 JASPAR yes 27716946
chr1 27959206 27959216 NEUROG2 JASPAR yes 118259542
chr1 27959241 27959257 RFX3 JASPAR yes 27716947
chr1 27959241 27959257 RFX3 JASPAR yes 118259543
chr1 27959249 27959264 ZIC3 JASPAR yes 27716948
chr1 27959249 27959264 ZIC4 JASPAR yes 27716949
chr1 27959249 27959264 ZIC3 JASPAR yes 118259544
chr1 27959249 27959264 ZIC4 JASPAR yes 118259545
chr1 27959250 27959260 SP1 JASPAR yes 27716950
chr1 27959250 27959260 SP1 JASPAR yes 118259546
chr1 27959250 27959264 GLIS2 JASPAR yes 27716951
chr1 27959250 27959264 ZIC1 JASPAR yes 27716952
chr1 27959250 27959264 GLIS2 JASPAR yes 118259547
chr1 27959250 27959264 ZIC1 JASPAR yes 118259548
chr1 27959253 27959258 SP1 TRANSFAC yes 27716953
chr1 27959253 27959258 SP1 TRANSFAC yes 118259549
chr1 27959253 27959259 SP1 TRANSFAC yes 27716954
chr1 27959253 27959259 SP1 TRANSFAC yes 118259550
chr1 27959257 27959264 SP1 TRANSFAC yes 27716955
chr1 27959257 27959264 SP1 TRANSFAC yes 118259551
chr1 27959257 27959267 SP1 JASPAR yes 27716956
chr1 27959257 27959267 SP1 JASPAR yes 118259552
chr1 27959258 27959266 SP1 TRANSFAC yes 27716957
chr1 27959258 27959266 SP1 TRANSFAC yes 118259553
chr1 27959259 27959264 SP1 TRANSFAC yes 27716958
chr1 27959259 27959264 SP1 TRANSFAC yes 118259554
chr1 27959260 27959265 SP1 TRANSFAC yes 27716959
chr1 27959260 27959265 SP1 TRANSFAC yes 118259555
chr1 27959260 27959266 SP1 TRANSFAC yes 27716960
chr1 27959260 27959266 SP1 TRANSFAC yes 118259556
chr1 27959266 27959270 H4TF2 TRANSFAC yes 27716961
chr1 27959266 27959270 H4TF2 TRANSFAC yes 118259557
chr1 27959272 27959293 ZNF263 JASPAR yes 27716962
chr1 27959272 27959293 ZNF263 JASPAR yes 118259558
chr1 27959273 27959277 LFA1 TRANSFAC yes 27716963
chr1 27959273 27959277 LFA1 TRANSFAC yes 118259559
chr1 27959297 27959302 H4TF1 TRANSFAC yes 27716964
chr1 27959297 27959302 H4TF1 TRANSFAC yes 118259560
chr1 27959313 27959326 ELF1 JASPAR yes 27716965
chr1 27959313 27959326 ELF1 JASPAR yes 118259561
chr1 27959316 27959326 GABPA JASPAR yes 27716966
chr1 27959316 27959326 GABPA JASPAR yes 118259562
chr1 27959316 27959327 ELK4 JASPAR yes 27716967
chr1 27959316 27959327 FLI1 JASPAR yes 27716968
chr1 27959316 27959327 ELK4 JASPAR yes 118259563
chr1 27959316 27959327 FLI1 JASPAR yes 118259564
chr1 27959318 27959328 NFKB1 JASPAR yes 27716969
chr1 27959318 27959328 NFKB1 JASPAR yes 118259565
chr1 27959325 27959331 SP1 TRANSFAC yes 27716970
chr1 27959325 27959331 SP1 TRANSFAC yes 118259566
chr1 27959333 27959348 TFAP2A JASPAR yes 27716971
chr1 27959333 27959348 TFAP2C JASPAR yes 27716972
chr1 27959333 27959348 TFAP2A JASPAR yes 118259567
chr1 27959333 27959348 TFAP2C JASPAR yes 118259568
chr1 27959334 27959338 H4TF2 TRANSFAC yes 27716973
chr1 27959334 27959338 H4TF2 TRANSFAC yes 118259569
chr1 27959336 27959348 TFAP2A JASPAR yes 27716974
chr1 27959336 27959348 TFAP2B JASPAR yes 27716975
chr1 27959336 27959348 TFAP2C JASPAR yes 27716976
chr1 27959336 27959348 TFAP2A JASPAR yes 118259570
chr1 27959336 27959348 TFAP2B JASPAR yes 118259571
chr1 27959336 27959348 TFAP2C JASPAR yes 118259572
chr1 27959338 27959349 EBF1 JASPAR yes 27716977
chr1 27959338 27959349 EBF1 JASPAR yes 118259573
chr1 27959342 27959363 ZNF263 JASPAR yes 27716978
chr1 27959342 27959363 ZNF263 JASPAR yes 118259574
chr1 27959344 27959364 RREB1 JASPAR yes 27716979
chr1 27959344 27959364 RREB1 JASPAR yes 118259575
chr1 27959350 27959360 SP1 JASPAR yes 27716980
chr1 27959350 27959360 SP1 JASPAR yes 118259576
chr1 27959350 27959364 PLAG1 JASPAR yes 27716981
chr1 27959350 27959364 PLAG1 JASPAR yes 118259577
chr1 27959351 27959356 SP1 TRANSFAC yes 27716982
chr1 27959351 27959356 SP1 TRANSFAC yes 118259578
chr1 27959357 27959367 MZF1 JASPAR yes 27716983
chr1 27959357 27959367 MZF1 JASPAR yes 118259579
chr1 27959361 27959379 ESR2 JASPAR yes 27716984
chr1 27959361 27959379 ESR2 JASPAR yes 118259580
chr1 27959374 27959387 EOMES JASPAR yes 27716985
chr1 27959374 27959387 EOMES JASPAR yes 118259581
chr1 27959375 27959386 E2F6 JASPAR yes 27716986
chr1 27959375 27959386 E2F6 JASPAR yes 118259582
chr1 27959375 27959389 E2F7 JASPAR yes 27716987
chr1 27959375 27959389 E2F7 JASPAR yes 118259583
chr1 27959376 27959387 TBX20 JASPAR yes 27716988
chr1 27959376 27959387 TBX20 JASPAR yes 118259584
chr1 27959377 27959387 TBX21 JASPAR yes 27716989
chr1 27959377 27959387 TBX21 JASPAR yes 118259585
chr1 27959378 27959386 TBX15 JASPAR yes 27716990
chr1 27959378 27959386 TBX15 JASPAR yes 118259586
chr1 27959385 27959403 ESR1 JASPAR yes 27716991
chr1 27959385 27959403 ESR1 JASPAR yes 118259587
chr1 27959387 27959402 ESR2 JASPAR yes 27716992
chr1 27959387 27959402 ESR2 JASPAR yes 118259588
chr1 27959388 27959392 ESR1 TRANSFAC yes 27716993
chr1 27959388 27959392 ESR1 TRANSFAC yes 118259589
chr1 27959389 27959399 SREBF2 JASPAR yes 27716994
chr1 27959389 27959399 SREBF2 JASPAR yes 118259590
chr1 27959411 27959416 ETS2 TRANSFAC yes 27716995
chr1 27959411 27959416 ETS2 TRANSFAC yes 118259591
chr1 27959413 27959433 PPARG JASPAR yes 27716996
chr1 27959413 27959433 PPARG JASPAR yes 118259592
chr1 27959433 27959439 MZF1 JASPAR yes 27716997
chr1 27959433 27959439 MZF1 JASPAR yes 118259593
chr1 27959443 27959453 RELA JASPAR yes 27716998
chr1 27959443 27959453 RELA JASPAR yes 118259594
chr1 27959443 27959454 NFKB1 JASPAR yes 27716999
chr1 27959443 27959454 NFKB1 JASPAR yes 118259595
chr1 27959454 27959464 SP1 JASPAR yes 27717000
chr1 27959454 27959464 SP1 JASPAR yes 118259596
chr1 27959455 27959465 SP1 JASPAR yes 27717001
chr1 27959455 27959465 SP1 JASPAR yes 118259597
chr1 27959459 27959470 EBF1 JASPAR yes 27717002
chr1 27959459 27959470 EBF1 JASPAR yes 118259598
chr1 27959475 27959486 FLI1 JASPAR yes 27717003
chr1 27959475 27959486 FLI1 JASPAR yes 118259599
chr1 27959476 27959486 GABPA JASPAR yes 27717004
chr1 27959476 27959486 GABPA JASPAR yes 118259600
chr1 27959476 27959489 ELF1 JASPAR yes 27717005
chr1 27959476 27959489 ELF1 JASPAR yes 118259601
chr1 27959477 27959484 SPI1 JASPAR yes 27717006
chr1 27959477 27959484 SPI1 JASPAR yes 118259602
chr1 27959477 27959485 FEV JASPAR yes 27717007
chr1 27959477 27959485 FEV JASPAR yes 118259603
chr1 27959479 27959484 ETS2 TRANSFAC yes 27717008
chr1 27959479 27959484 ETS2 TRANSFAC yes 118259604
chr1 27959483 27959497 XBP1 JASPAR yes 27717009
chr1 27959483 27959497 XBP1 JASPAR yes 118259605
chr1 27959484 27959498 CREB3L1 JASPAR yes 27717010
chr1 27959484 27959498 CREB3L1 JASPAR yes 118259606
chr1 27959516 27959536 RREB1 JASPAR yes 27717011
chr1 27959516 27959536 RREB1 JASPAR yes 118259607
chr1 27959517 27959529 FOXI1 JASPAR yes 27717012
chr1 27959517 27959529 FOXI1 JASPAR yes 118259608
chr1 27959525 27959531 ZNF354C JASPAR yes 27717013
chr1 27959525 27959531 ZNF354C JASPAR yes 118259609
chr1 27959535 27959549 NR2F1 JASPAR yes 27717014
chr1 27959535 27959549 NR2F1 JASPAR yes 118259610
chr1 27959575 27959587 FOXI1 JASPAR yes 27717015
chr1 27959575 27959587 FOXI1 JASPAR yes 118259611
chr1 27959578 27959598 RREB1 JASPAR yes 27717016
chr1 27959578 27959598 RREB1 JASPAR yes 118259612
chr1 27959584 27959594 TBX21 JASPAR yes 27717017
chr1 27959584 27959594 TBX21 JASPAR yes 118259613
chr1 27959585 27959593 MGA JASPAR yes 27717018
chr1 27959585 27959593 TBX15 JASPAR yes 27717019
chr1 27959585 27959593 TBX1 JASPAR yes 27717020
chr1 27959585 27959593 TBX4 JASPAR yes 27717021
chr1 27959585 27959593 TBX5 JASPAR yes 27717022
chr1 27959585 27959593 MGA JASPAR yes 118259614
chr1 27959585 27959593 TBX15 JASPAR yes 118259615
chr1 27959585 27959593 TBX1 JASPAR yes 118259616
chr1 27959585 27959593 TBX4 JASPAR yes 118259617
chr1 27959585 27959593 TBX5 JASPAR yes 118259618
chr1 27959599 27959606 CEBPA TRANSFAC yes 27717023
chr1 27959599 27959606 CEBPA TRANSFAC yes 118259619
chr1 27959603 27959613 TBX21 JASPAR yes 27717024
chr1 27959603 27959613 TBX21 JASPAR yes 118259620
chr1 27959603 27959614 TBX20 JASPAR yes 27717025
chr1 27959603 27959614 TBX2 JASPAR yes 27717026
chr1 27959603 27959614 TBX20 JASPAR yes 118259621
chr1 27959603 27959614 TBX2 JASPAR yes 118259622
chr1 27959603 27959616 EOMES JASPAR yes 27717027
chr1 27959603 27959616 EOMES JASPAR yes 118259623
chr1 27959604 27959612 MGA JASPAR yes 27717028
chr1 27959604 27959612 TBX15 JASPAR yes 27717029
chr1 27959604 27959612 TBX1 JASPAR yes 27717030
chr1 27959604 27959612 TBX4 JASPAR yes 27717031
chr1 27959604 27959612 TBX5 JASPAR yes 27717032
chr1 27959604 27959612 MGA JASPAR yes 118259624
chr1 27959604 27959612 TBX15 JASPAR yes 118259625
chr1 27959604 27959612 TBX1 JASPAR yes 118259626
chr1 27959604 27959612 TBX4 JASPAR yes 118259627
chr1 27959604 27959612 TBX5 JASPAR yes 118259628
chr1 27959626 27959640 SPI1 JASPAR yes 27717033
chr1 27959626 27959640 SPIC JASPAR yes 27717034
chr1 27959626 27959640 SPI1 JASPAR yes 118259629
chr1 27959626 27959640 SPIC JASPAR yes 118259630
chr1 27959627 27959640 ELF1 JASPAR yes 27717035
chr1 27959627 27959640 ELF1 JASPAR yes 118259631
chr1 27959628 27959640 EHF JASPAR yes 27717036
chr1 27959628 27959640 ELF1 JASPAR yes 27717037
chr1 27959628 27959640 ELF4 JASPAR yes 27717038
chr1 27959628 27959640 EHF JASPAR yes 118259632
chr1 27959628 27959640 ELF1 JASPAR yes 118259633
chr1 27959628 27959640 ELF4 JASPAR yes 118259634
chr1 27959628 27959641 ELF3 JASPAR yes 27717039
chr1 27959628 27959641 ELF3 JASPAR yes 118259635
chr1 27959629 27959640 ELF5 JASPAR yes 27717040
chr1 27959629 27959640 ETV2 JASPAR yes 27717041
chr1 27959629 27959640 SPDEF JASPAR yes 27717042
chr1 27959629 27959640 ELF5 JASPAR yes 118259636
chr1 27959629 27959640 ETV2 JASPAR yes 118259637
chr1 27959629 27959640 SPDEF JASPAR yes 118259638
chr1 27959630 27959640 ELK1 JASPAR yes 27717043
chr1 27959630 27959640 ELK3 JASPAR yes 27717044
chr1 27959630 27959640 ERF JASPAR yes 27717045
chr1 27959630 27959640 ERG JASPAR yes 27717046
chr1 27959630 27959640 ETS1 JASPAR yes 27717047
chr1 27959630 27959640 ETV1 JASPAR yes 27717048
chr1 27959630 27959640 ETV3 JASPAR yes 27717049
chr1 27959630 27959640 ETV4 JASPAR yes 27717050
chr1 27959630 27959640 ETV6 JASPAR yes 27717051
chr1 27959630 27959640 FEV JASPAR yes 27717052
chr1 27959630 27959640 FLI1 JASPAR yes 27717053
chr1 27959630 27959640 ELK1 JASPAR yes 118259639
chr1 27959630 27959640 ELK3 JASPAR yes 118259640
chr1 27959630 27959640 ERF JASPAR yes 118259641
chr1 27959630 27959640 ERG JASPAR yes 118259642
chr1 27959630 27959640 ETS1 JASPAR yes 118259643
chr1 27959630 27959640 ETV1 JASPAR yes 118259644
chr1 27959630 27959640 ETV3 JASPAR yes 118259645
chr1 27959630 27959640 ETV4 JASPAR yes 118259646
chr1 27959630 27959640 ETV6 JASPAR yes 118259647
chr1 27959630 27959640 FEV JASPAR yes 118259648
chr1 27959630 27959640 FLI1 JASPAR yes 118259649
chr1 27959630 27959641 ELK4 JASPAR yes 27717054
chr1 27959630 27959641 FLI1 JASPAR yes 27717055
chr1 27959630 27959641 ELK4 JASPAR yes 118259650
chr1 27959630 27959641 FLI1 JASPAR yes 118259651
chr1 27959631 27959639 EHF JASPAR yes 27717056
chr1 27959631 27959639 FEV JASPAR yes 27717057
chr1 27959631 27959639 EHF JASPAR yes 118259652
chr1 27959631 27959639 FEV JASPAR yes 118259653
chr1 27959632 27959639 SPI1 JASPAR yes 27717058
chr1 27959632 27959639 SPI1 JASPAR yes 118259654
chr1 27959650 27959670 RREB1 JASPAR yes 27717059
chr1 27959650 27959670 RREB1 JASPAR yes 118259655
chr1 27959652 27959673 ZNF263 JASPAR yes 27717060
chr1 27959652 27959673 ZNF263 JASPAR yes 118259656
chr1 27959654 27959674 RREB1 JASPAR yes 27717061
chr1 27959654 27959674 RREB1 JASPAR yes 118259657
chr1 27959669 27959683 GLIS3 JASPAR yes 27717062
chr1 27959669 27959683 GLIS3 JASPAR yes 118259658
chr1 27959679 27959693 STAT1 JASPAR yes 27717063
chr1 27959679 27959693 STAT1 JASPAR yes 118259659
chr1 27959696 27959711 JUND JASPAR yes 27717064
chr1 27959696 27959711 JUND JASPAR yes 118259660
chr1 27959697 27959710 JUN JASPAR yes 27717065
chr1 27959697 27959710 JUN JASPAR yes 118259661
SNP sites on vista940[chr1:27959091-27959724]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27959309 rs555366083 G A no 187539
chr1 27959336 rs113665708 G A
H4TF2 TFAP2A TFAP2B TFAP2C
187540
chr1 27959356 rs75354344 G A
PLAG1 RREB1 SP1 ZNF263
187541
chr1 27959423 rs557795363 T C
PPARG
187542
chr1 27959653 rs528754818 C G
RREB1 ZNF263
187543
chr1 27959685 rs140022391 A G
STAT1
187544
Genes possibly regulated by vista940[chr1:27959091-27959724]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 71851
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 97936
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 60995
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 7234
Expression level of Genes
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miRNAs possibly regulated by vista940[chr1:27959091-27959724]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results