EnhancerDB
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  3. vista941[chr1:27959966-27960344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista941[chr1:27959966-27960344]
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Tissue distribution of vista941
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Transcription factor that possibly regulate vista941[chr1:27959966-27960344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27959955 27959966 NRL JASPAR yes 27717097
chr1 27959955 27959966 NRL JASPAR yes 118259662
chr1 27959958 27959971 NR2F1 JASPAR yes 27717098
chr1 27959958 27959971 NR2F1 JASPAR yes 118259663
chr1 27959967 27959973 MZF1 JASPAR yes 27717099
chr1 27959967 27959973 MZF1 JASPAR yes 118259664
chr1 27959989 27960000 CDX2 JASPAR yes 27717100
chr1 27959989 27960000 CDX2 JASPAR yes 118259665
chr1 27959990 27960001 HOXA10 JASPAR yes 27717101
chr1 27959990 27960001 HOXA10 JASPAR yes 118259666
chr1 27959991 27960000 CDX1 JASPAR yes 27717102
chr1 27959991 27960000 CDX1 JASPAR yes 118259667
chr1 27959991 27960007 POU4F3 JASPAR yes 27717103
chr1 27959991 27960007 POU4F3 JASPAR yes 118259668
chr1 27959993 27960007 POU4F1 JASPAR yes 27717104
chr1 27959993 27960007 POU4F1 JASPAR yes 118259669
chr1 27960000 27960004 YY1 TRANSFAC yes 27717105
chr1 27960000 27960004 YY1 TRANSFAC yes 118259670
chr1 27960023 27960027 H4TF2 TRANSFAC yes 27717106
chr1 27960023 27960027 H4TF2 TRANSFAC yes 118259671
chr1 27960025 27960036 EBF1 JASPAR yes 27717107
chr1 27960025 27960036 EBF1 JASPAR yes 118259672
chr1 27960037 27960041 NFE TRANSFAC yes 27717108
chr1 27960037 27960041 NFE TRANSFAC yes 118259673
chr1 27960052 27960056 LFA1 TRANSFAC yes 27717109
chr1 27960052 27960056 LFA1 TRANSFAC yes 118259674
chr1 27960061 27960065 H4TF2 TRANSFAC yes 27717110
chr1 27960061 27960065 H4TF2 TRANSFAC yes 118259675
chr1 27960062 27960072 MZF1 JASPAR yes 27717111
chr1 27960062 27960072 MZF1 JASPAR yes 118259676
chr1 27960065 27960071 SP1 TRANSFAC yes 27717112
chr1 27960065 27960071 SP1 TRANSFAC yes 118259677
chr1 27960076 27960096 RREB1 JASPAR yes 27717113
chr1 27960076 27960096 RREB1 JASPAR yes 118259678
chr1 27960077 27960083 TCF4 TRANSFAC yes 27717114
chr1 27960077 27960083 TCF4 TRANSFAC yes 118259679
chr1 27960088 27960103 FOXA1 JASPAR yes 27717115
chr1 27960088 27960103 FOXA1 JASPAR yes 118259680
chr1 27960089 27960104 FOXP1 JASPAR yes 27717116
chr1 27960089 27960104 FOXP1 JASPAR yes 118259681
chr1 27960090 27960101 FOXP2 JASPAR yes 27717117
chr1 27960090 27960101 FOXP2 JASPAR yes 118259682
chr1 27960090 27960102 FOXC2 JASPAR yes 27717118
chr1 27960090 27960102 FOXC2 JASPAR yes 118259683
chr1 27960091 27960099 FOXD1 JASPAR yes 27717119
chr1 27960091 27960099 FOXG1 JASPAR yes 27717120
chr1 27960091 27960099 FOXO3 JASPAR yes 27717121
chr1 27960091 27960099 FOXD1 JASPAR yes 118259684
chr1 27960091 27960099 FOXG1 JASPAR yes 118259685
chr1 27960091 27960099 FOXO3 JASPAR yes 118259686
chr1 27960091 27960102 FOXB1 JASPAR yes 27717122
chr1 27960091 27960102 FOXC1 JASPAR yes 27717123
chr1 27960091 27960102 FOXB1 JASPAR yes 118259687
chr1 27960091 27960102 FOXC1 JASPAR yes 118259688
chr1 27960092 27960099 FOXD2 JASPAR yes 27717124
chr1 27960092 27960099 FOXI1 JASPAR yes 27717125
chr1 27960092 27960099 FOXL1 JASPAR yes 27717126
chr1 27960092 27960099 FOXO4 JASPAR yes 27717127
chr1 27960092 27960099 FOXO6 JASPAR yes 27717128
chr1 27960092 27960099 FOXP3 JASPAR yes 27717129
chr1 27960092 27960099 FOXD2 JASPAR yes 118259689
chr1 27960092 27960099 FOXI1 JASPAR yes 118259690
chr1 27960092 27960099 FOXL1 JASPAR yes 118259691
chr1 27960092 27960099 FOXO4 JASPAR yes 118259692
chr1 27960092 27960099 FOXO6 JASPAR yes 118259693
chr1 27960092 27960099 FOXP3 JASPAR yes 118259694
chr1 27960092 27960100 FOXO3 JASPAR yes 27717130
chr1 27960092 27960100 FOXO3 JASPAR yes 118259695
chr1 27960092 27960103 FOXA1 JASPAR yes 27717131
chr1 27960092 27960103 FOXA1 JASPAR yes 118259696
chr1 27960200 27960209 SNAI2 JASPAR yes 27717132
chr1 27960200 27960209 SNAI2 JASPAR yes 118259697
chr1 27960200 27960210 ID4 JASPAR yes 27717133
chr1 27960200 27960210 TCF3 JASPAR yes 27717134
chr1 27960200 27960210 TCF4 JASPAR yes 27717135
chr1 27960200 27960210 ID4 JASPAR yes 118259698
chr1 27960200 27960210 TCF3 JASPAR yes 118259699
chr1 27960200 27960210 TCF4 JASPAR yes 118259700
chr1 27960230 27960233 MYB TRANSFAC yes 27717136
chr1 27960230 27960233 MYB TRANSFAC yes 118259701
chr1 27960236 27960240 YY1 TRANSFAC yes 27717137
chr1 27960236 27960240 YY1 TRANSFAC yes 118259702
chr1 27960255 27960267 ZBTB7B JASPAR yes 27717138
chr1 27960255 27960267 ZBTB7C JASPAR yes 27717139
chr1 27960255 27960267 ZBTB7B JASPAR yes 118259703
chr1 27960255 27960267 ZBTB7C JASPAR yes 118259704
chr1 27960257 27960270 NFKB1 JASPAR yes 27717140
chr1 27960257 27960270 NFKB2 JASPAR yes 27717141
chr1 27960257 27960270 NFKB1 JASPAR yes 118259705
chr1 27960257 27960270 NFKB2 JASPAR yes 118259706
chr1 27960258 27960269 NFKB1 JASPAR yes 27717142
chr1 27960258 27960269 NFKB1 JASPAR yes 118259707
chr1 27960305 27960320 PRDM1 JASPAR yes 118259708
chr1 27960320 27960341 MAFG JASPAR yes 118259709
chr1 27960324 27960335 JUNB JASPAR yes 118259710
chr1 27960324 27960335 NFE2L2 JASPAR yes 118259711
chr1 27960325 27960336 FOS JASPAR yes 118259712
chr1 27960325 27960336 FOSL1 JASPAR yes 118259713
chr1 27960325 27960336 JUND JASPAR yes 118259714
chr1 27960327 27960334 JUN TRANSFAC yes 118259715
chr1 27960335 27960340 GATA2 JASPAR yes 118259716
SNP sites on vista941[chr1:27959966-27960344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27960011 rs6658795 C T no 187548
chr1 27960112 rs568231369 ACT A no 187549
chr1 27960238 rs530006303 A AT
YY1
187550
chr1 27960250 rs1292073 A G no 187551
chr1 27960254 rs6671549 A G no 187552
chr1 27960259 rs190169500 G C
NFKB1 NFKB2 ZBTB7B ZBTB7C
187553
Genes possibly regulated by vista941[chr1:27959966-27960344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 70976
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 98556
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 61615
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 7854
Expression level of Genes
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miRNAs possibly regulated by vista941[chr1:27959966-27960344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results