EnhancerDB
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  3. vista942[chr1:27963400-27963974]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista942[chr1:27963400-27963974]
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Tissue distribution of vista942
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Transcription factor that possibly regulate vista942[chr1:27963400-27963974]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27963404 27963408 H1TF2 TRANSFAC yes 118259717
chr1 27963404 27963408 NFE TRANSFAC yes 118259718
chr1 27963404 27963408 SRF TRANSFAC yes 118259719
chr1 27963410 27963422 INSM1 JASPAR yes 118259720
chr1 27963419 27963422 MYB TRANSFAC yes 118259721
chr1 27963428 27963433 SP1 TRANSFAC yes 118259722
chr1 27963436 27963450 GATA2 JASPAR yes 118259723
chr1 27963438 27963446 GATA3 JASPAR yes 118259724
chr1 27963438 27963446 GATA5 JASPAR yes 118259725
chr1 27963439 27963451 TEAD1 JASPAR yes 118259726
chr1 27963453 27963459 MYC TRANSFAC yes 118259727
chr1 27963458 27963466 FEV JASPAR yes 118259728
chr1 27963467 27963488 ZNF263 JASPAR yes 118259729
chr1 27963468 27963475 CEBPA TRANSFAC yes 118259730
chr1 27963468 27963489 ZNF263 JASPAR yes 118259731
chr1 27963471 27963492 ZNF263 JASPAR yes 118259732
chr1 27963477 27963498 ZNF263 JASPAR yes 118259733
chr1 27963479 27963492 SMAD2 JASPAR yes 118259734
chr1 27963480 27963486 PEA3 TRANSFAC yes 118259735
chr1 27963542 27963546 LFA1 TRANSFAC yes 118259736
chr1 27963550 27963565 NR2C2 JASPAR yes 118259737
chr1 27963554 27963565 YY2 JASPAR yes 118259738
chr1 27963558 27963564 YY1 JASPAR yes 118259739
chr1 27963580 27963586 YY1 JASPAR yes 118259740
chr1 27963596 27963606 ALX3 JASPAR yes 118259741
chr1 27963596 27963606 ESX1 JASPAR yes 118259742
chr1 27963596 27963606 HESX1 JASPAR yes 118259743
chr1 27963596 27963606 LBX2 JASPAR yes 118259744
chr1 27963596 27963606 MIXL1 JASPAR yes 118259745
chr1 27963597 27963605 LHX9 JASPAR yes 118259746
chr1 27963597 27963605 SHOX JASPAR yes 118259747
chr1 27963600 27963611 FOXA1 JASPAR yes 118259748
chr1 27963600 27963615 FOXA1 JASPAR yes 118259749
chr1 27963621 27963625 TEAD2 TRANSFAC yes 118259750
chr1 27963635 27963648 SMAD2 JASPAR yes 118259751
chr1 27963639 27963654 TFAP2A JASPAR yes 118259752
chr1 27963642 27963653 TFAP2B JASPAR yes 118259753
chr1 27963642 27963653 TFAP2C JASPAR yes 118259754
chr1 27963671 27963675 H4TF2 TRANSFAC yes 118259755
chr1 27963683 27963696 NFKB1 JASPAR yes 118259756
chr1 27963683 27963696 NFKB2 JASPAR yes 118259757
chr1 27963684 27963694 RELA JASPAR yes 118259758
chr1 27963684 27963695 NFKB1 JASPAR yes 118259759
chr1 27963684 27963697 NFKB1 JASPAR yes 118259760
chr1 27963684 27963697 NFKB2 JASPAR yes 118259761
chr1 27963685 27963695 NFKB1 JASPAR yes 118259762
chr1 27963685 27963696 NFKB1 JASPAR yes 118259763
chr1 27963686 27963696 RELA JASPAR yes 118259764
chr1 27963695 27963699 H1TF2 TRANSFAC yes 118259765
chr1 27963695 27963699 NFE TRANSFAC yes 118259766
chr1 27963695 27963699 SRF TRANSFAC yes 118259767
chr1 27963700 27963704 NFE TRANSFAC yes 118259768
chr1 27963710 27963721 NFE2L2 JASPAR yes 118259769
chr1 27963714 27963718 NFE TRANSFAC yes 118259770
chr1 27963726 27963740 JUN JASPAR yes 118259771
chr1 27963728 27963739 BATF JASPAR yes 118259772
chr1 27963730 27963741 FOS JASPAR yes 118259773
chr1 27963730 27963741 FOSL1 JASPAR yes 118259774
chr1 27963730 27963741 JUND JASPAR yes 118259775
chr1 27963731 27963742 FOSL2 JASPAR yes 118259776
chr1 27963731 27963742 JUNB JASPAR yes 118259777
chr1 27963731 27963745 JUN JASPAR yes 118259778
chr1 27963740 27963752 NHLH1 JASPAR yes 118259779
chr1 27963741 27963751 NHLH1 JASPAR yes 118259780
chr1 27963779 27963799 RREB1 JASPAR yes 118259781
chr1 27963781 27963801 RREB1 JASPAR yes 118259782
chr1 27963815 27963830 TFAP2C JASPAR yes 118259783
chr1 27963816 27963827 TFAP2A JASPAR yes 118259784
chr1 27963816 27963827 TFAP2B JASPAR yes 118259785
chr1 27963816 27963827 TFAP2C JASPAR yes 118259786
chr1 27963817 27963826 TFAP2A JASPAR yes 118259787
chr1 27963822 27963826 LFA1 TRANSFAC yes 118259788
chr1 27963830 27963845 RFX5 JASPAR yes 118259789
chr1 27963832 27963846 EBF1 JASPAR yes 118259790
chr1 27963833 27963847 GLIS3 JASPAR yes 118259791
chr1 27963834 27963846 INSM1 JASPAR yes 118259792
chr1 27963836 27963856 RREB1 JASPAR yes 118259793
chr1 27963839 27963849 SP1 JASPAR yes 118259794
chr1 27963839 27963859 RREB1 JASPAR yes 118259795
chr1 27963839 27963860 ZNF263 JASPAR yes 118259796
chr1 27963855 27963860 GATA2 JASPAR yes 118259797
chr1 27963860 27963868 FOXO3 JASPAR yes 118259798
chr1 27963862 27963877 TFAP2C JASPAR yes 118259799
chr1 27963868 27963879 ESRRA JASPAR yes 118259800
chr1 27963869 27963884 NR2C2 JASPAR yes 118259801
chr1 27963872 27963876 LFA1 TRANSFAC yes 118259802
chr1 27963872 27963884 INSM1 JASPAR yes 118259803
chr1 27963951 27963961 MAX JASPAR yes 118259804
chr1 27963952 27963962 BHLHE40 JASPAR yes 118259805
chr1 27963952 27963962 MAX JASPAR yes 118259806
chr1 27963952 27963962 MLXIPL JASPAR yes 118259807
chr1 27963952 27963962 MLX JASPAR yes 118259808
chr1 27963952 27963962 MNT JASPAR yes 118259809
chr1 27963952 27963962 TFE3 JASPAR yes 118259810
chr1 27963954 27963959 MYC TRANSFAC yes 118259811
chr1 27963954 27963959 USF1 TRANSFAC yes 118259812
chr1 27963954 27963959 USF2 TRANSFAC yes 118259813
chr1 27963958 27963964 JUN TRANSFAC yes 118259814
SNP sites on vista942[chr1:27963400-27963974]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27963594 rs143556525 A G no 187579
chr1 27963670 rs137973962 C T no 187580
chr1 27963710 rs115856517 T C
NFE2L2
187581
Genes possibly regulated by vista942[chr1:27963400-27963974]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 67542
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 98388
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 65245
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 11484
Expression level of Genes
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miRNAs possibly regulated by vista942[chr1:27963400-27963974]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results