EnhancerDB
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  3. vista947[chr1:27982664-27982914]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista947[chr1:27982664-27982914]
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Tissue distribution of vista947
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Transcription factor that possibly regulate vista947[chr1:27982664-27982914]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27982653 27982667 RORA JASPAR yes 27719235
chr1 27982653 27982667 RORA JASPAR yes 118260029
chr1 27982662 27982674 INSM1 JASPAR yes 27719236
chr1 27982662 27982674 INSM1 JASPAR yes 118260030
chr1 27982671 27982678 E2F1 TRANSFAC yes 27719237
chr1 27982671 27982678 E2F1 TRANSFAC yes 118260031
chr1 27982690 27982705 RFX5 JASPAR yes 27719238
chr1 27982690 27982705 RFX5 JASPAR yes 118260032
chr1 27982699 27982717 SRF JASPAR yes 27719239
chr1 27982699 27982717 SRF JASPAR yes 118260033
chr1 27982701 27982717 SRF JASPAR yes 27719240
chr1 27982701 27982717 SRF JASPAR yes 118260034
chr1 27982701 27982719 SRF JASPAR yes 27719241
chr1 27982701 27982719 SRF JASPAR yes 118260035
chr1 27982702 27982714 SRF JASPAR yes 27719242
chr1 27982702 27982714 SRF JASPAR yes 118260036
chr1 27982704 27982716 SRF JASPAR yes 27719243
chr1 27982704 27982716 SRF JASPAR yes 118260037
chr1 27982718 27982722 H4TF2 TRANSFAC yes 27719244
chr1 27982718 27982722 H4TF2 TRANSFAC yes 118260038
chr1 27982718 27982733 ZIC4 JASPAR yes 27719245
chr1 27982718 27982733 ZIC4 JASPAR yes 118260039
chr1 27982734 27982748 JUN JASPAR yes 27719246
chr1 27982734 27982748 JUN JASPAR yes 118260040
chr1 27982739 27982746 JUN TRANSFAC yes 27719247
chr1 27982739 27982746 JUN TRANSFAC yes 118260041
chr1 27982753 27982758 ETS2 TRANSFAC yes 27719248
chr1 27982753 27982758 ETS2 TRANSFAC yes 118260042
chr1 27982753 27982761 EHF JASPAR yes 27719249
chr1 27982753 27982761 EHF JASPAR yes 118260043
chr1 27982761 27982772 NFE2 JASPAR yes 27719250
chr1 27982761 27982772 NFE2 JASPAR yes 118260044
chr1 27982795 27982801 NFIC JASPAR yes 27719251
chr1 27982795 27982801 NFIC JASPAR yes 118260045
chr1 27982802 27982814 NHLH1 JASPAR yes 27719252
chr1 27982802 27982814 NHLH1 JASPAR yes 118260046
chr1 27982803 27982813 FIGLA JASPAR yes 27719253
chr1 27982803 27982813 MSC JASPAR yes 27719254
chr1 27982803 27982813 TFAP4 JASPAR yes 27719255
chr1 27982803 27982813 FIGLA JASPAR yes 118260047
chr1 27982803 27982813 MSC JASPAR yes 118260048
chr1 27982803 27982813 TFAP4 JASPAR yes 118260049
chr1 27982803 27982815 TAL1 JASPAR yes 27719256
chr1 27982803 27982815 TAL1 JASPAR yes 118260050
chr1 27982819 27982834 ZIC4 JASPAR yes 27719257
chr1 27982819 27982834 ZIC4 JASPAR yes 118260051
chr1 27982826 27982831 SP1 TRANSFAC yes 27719258
chr1 27982826 27982831 SP1 TRANSFAC yes 118260052
chr1 27982827 27982832 SP1 TRANSFAC yes 27719259
chr1 27982827 27982832 SP1 TRANSFAC yes 118260053
chr1 27982841 27982846 TFAP2A TRANSFAC yes 27719260
chr1 27982841 27982846 TFAP2A TRANSFAC yes 118260054
chr1 27982841 27982847 MZF1 JASPAR yes 27719261
chr1 27982841 27982847 MZF1 JASPAR yes 118260055
chr1 27982850 27982865 RUNX2 JASPAR yes 27719262
chr1 27982850 27982865 RUNX2 JASPAR yes 118260056
chr1 27982908 27982912 LFA1 TRANSFAC yes 27719263
chr1 27982908 27982912 LFA1 TRANSFAC yes 118260057
chr1 27982912 27982918 GATA3 JASPAR yes 27719264
chr1 27982912 27982918 GATA3 JASPAR yes 118260058
SNP sites on vista947[chr1:27982664-27982914]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27982740 rs530594351 G C
JUN
187824
Genes possibly regulated by vista947[chr1:27982664-27982914]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 48278
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 79124
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 84185
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 30424
Expression level of Genes
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miRNAs possibly regulated by vista947[chr1:27982664-27982914]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results