EnhancerDB
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  3. vista9487[chr11:5350226-5350590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9487[chr11:5350226-5350590]
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Tissue distribution of vista9487
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Transcription factor that possibly regulate vista9487[chr11:5350226-5350590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 5350226 5350241 FOXP1 JASPAR yes 114034239
chr11 5350226 5350247 IRF1 JASPAR yes 114034240
chr11 5350227 5350242 FOXP1 JASPAR yes 114034241
chr11 5350228 5350243 FOXP1 JASPAR yes 114034242
chr11 5350229 5350244 FOXP1 JASPAR yes 114034243
chr11 5350230 5350245 FOXP1 JASPAR yes 114034244
chr11 5350231 5350246 FOXP1 JASPAR yes 114034245
chr11 5350232 5350247 FOXP1 JASPAR yes 114034246
chr11 5350233 5350248 FOXP1 JASPAR yes 114034247
chr11 5350235 5350250 MEF2A JASPAR yes 114034248
chr11 5350236 5350251 MEF2C JASPAR yes 114034249
chr11 5350246 5350252 GATA3 JASPAR yes 114034250
chr11 5350260 5350275 RFX5 JASPAR yes 114034251
chr11 5350261 5350265 NFE TRANSFAC yes 114034252
chr11 5350292 5350302 SREBF1 JASPAR yes 114034253
chr11 5350344 5350355 EBF1 JASPAR yes 114034254
chr11 5350372 5350384 CREB1 JASPAR yes 114034255
chr11 5350395 5350410 MEF2A JASPAR yes 114034256
chr11 5350396 5350411 MEF2C JASPAR yes 114034257
chr11 5350397 5350409 MEF2A JASPAR yes 114034258
chr11 5350397 5350409 MEF2B JASPAR yes 114034259
chr11 5350397 5350409 MEF2D JASPAR yes 114034260
chr11 5350399 5350403 YY1 TRANSFAC yes 114034261
chr11 5350414 5350427 NFKB1 JASPAR yes 114034262
chr11 5350414 5350427 NFKB2 JASPAR yes 114034263
chr11 5350417 5350428 CEBPB JASPAR yes 114034264
chr11 5350417 5350429 HLF JASPAR yes 114034265
chr11 5350418 5350429 CEBPA JASPAR yes 114034266
chr11 5350449 5350462 NR2F1 JASPAR yes 114034267
chr11 5350453 5350470 RXRA JASPAR yes 114034268
chr11 5350463 5350469 ZNF354C JASPAR yes 114034269
chr11 5350468 5350482 PLAG1 JASPAR yes 114034270
chr11 5350473 5350480 E2F1 TRANSFAC yes 114034271
chr11 5350497 5350506 SNAI2 JASPAR yes 114034272
chr11 5350497 5350507 ID4 JASPAR yes 114034273
chr11 5350497 5350507 TCF3 JASPAR yes 114034274
chr11 5350497 5350507 TCF4 JASPAR yes 114034275
chr11 5350499 5350508 ZEB1 JASPAR yes 114034276
chr11 5350499 5350509 TBX21 JASPAR yes 114034277
chr11 5350499 5350510 TBX2 JASPAR yes 114034278
chr11 5350499 5350513 JUN JASPAR yes 114034279
chr11 5350500 5350508 MGA JASPAR yes 114034280
chr11 5350500 5350508 TBX15 JASPAR yes 114034281
chr11 5350500 5350508 TBX1 JASPAR yes 114034282
chr11 5350500 5350508 TBX4 JASPAR yes 114034283
chr11 5350500 5350508 TBX5 JASPAR yes 114034284
chr11 5350500 5350510 TBR1 JASPAR yes 114034285
chr11 5350500 5350513 SMAD2 JASPAR yes 114034286
chr11 5350502 5350513 FOSL2 JASPAR yes 114034287
chr11 5350502 5350513 JUNB JASPAR yes 114034288
chr11 5350503 5350514 FOS JASPAR yes 114034289
chr11 5350503 5350514 FOSL1 JASPAR yes 114034290
chr11 5350503 5350514 JUND JASPAR yes 114034291
chr11 5350503 5350514 NFE2 JASPAR yes 114034292
chr11 5350504 5350513 JDP2 JASPAR yes 114034293
chr11 5350504 5350515 FOSL2 JASPAR yes 114034294
chr11 5350504 5350515 JUNB JASPAR yes 114034295
chr11 5350504 5350518 JUN JASPAR yes 114034296
chr11 5350531 5350545 GATA2 JASPAR yes 114034297
chr11 5350535 5350543 GATA3 JASPAR yes 114034298
chr11 5350545 5350556 PHOX2A JASPAR yes 114034299
chr11 5350545 5350556 PROP1 JASPAR yes 114034300
chr11 5350551 5350566 SCRT1 JASPAR yes 114034301
chr11 5350567 5350588 IRF1 JASPAR yes 114034302
chr11 5350571 5350586 FOXP1 JASPAR yes 114034303
chr11 5350572 5350587 FOXP1 JASPAR yes 114034304
chr11 5350573 5350588 FOXP1 JASPAR yes 114034305
chr11 5350574 5350589 FOXP1 JASPAR yes 114034306
chr11 5350575 5350590 FOXP1 JASPAR yes 114034307
SNP sites on vista9487[chr11:5350226-5350590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 5350246 rs4553397 T A
FOXP1 GATA3 IRF1 MEF2A MEF2C
1816549
chr11 5350278 rs4134042 G C no 1816550
chr11 5350376 rs74857010 G A
CREB1
1816551
chr11 5350394 rs187835597 T A no 1816552
chr11 5350430 rs12099343 T C no 1816553
chr11 5350447 rs4134041 G C no 1816554
chr11 5350461 rs543406299 G A
NR2F1 RXRA
1816555
chr11 5350487 rs375546104 AGT A no 1816556
chr11 5350487 rs540216408 AGT A no 1816557
chr11 5350508 rs558296254 A T
FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND MGA NFE2 SMAD2 TBR1 TBX1 TBX15 TBX2 TBX21 TBX4 TBX5 ZEB1
1816558
chr11 5350557 rs576856263 C T
SCRT1
1816559
chr11 5350558 rs540692419 T C
SCRT1
1816560
Genes possibly regulated by vista9487[chr11:5350226-5350590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 5246694 5250625 - HBB ENSG00000244734.2 5250625 0.94 1.0 10468 399
chr11 5253908 5256600 - HBD ENSG00000223609.3 5256600 0.98 1.0 10469 6374
chr11 5269313 5271122 - HBG1 ENSG00000213934.5 5271122 0.91 1.0 10470 20896
chr11 5322244 5323226 - OR51B4 ENSG00000183251.3 5323226 0.93 1.0 10473 73000
chr11 5344541 5345582 - OR51B2 ENSG00000184881.2 5345582 0.96 1.0 10474 95356
chr11 5363744 5364809 - OR51B5 ENSG00000242180.2 5364809 0.97 1.0 10475 85781
chr11 5372738 5373676 + OR51B6 ENSG00000176239.7 5372738 0.96 1.0 10476 77852
chr11 5410607 5411664 + OR51M1 ENSG00000184698.3 5410607 0.0 1.0 10477 39983
chr11 5423827 5424777 + OR51J1 ENSG00000184321.1 5423827 0.0 1.0 10478 26763
chr11 5443341 5444436 + OR51Q1 ENSG00000167360.4 5443341 0.99 0.0 10479 7249
Expression level of Genes
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miRNAs possibly regulated by vista9487[chr11:5350226-5350590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results