EnhancerDB
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  3. vista9565[chr11:9310546-9310889]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9565[chr11:9310546-9310889]
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Tissue distribution of vista9565
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Transcription factor that possibly regulate vista9565[chr11:9310546-9310889]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 9310563 9310567 YY1 TRANSFAC yes 114037723
chr11 9310570 9310582 PROX1 JASPAR yes 114037724
chr11 9310576 9310595 PAX5 JASPAR yes 114037725
chr11 9310580 9310591 NFE2L2 JASPAR yes 114037726
chr11 9310582 9310588 SOX10 JASPAR yes 114037727
chr11 9310659 9310669 NKX2-3 JASPAR yes 114037728
chr11 9310660 9310669 NKX2-8 JASPAR yes 114037729
chr11 9310691 9310703 PKNOX1 JASPAR yes 114037730
chr11 9310691 9310703 PKNOX2 JASPAR yes 114037731
chr11 9310691 9310703 TGIF2 JASPAR yes 114037732
chr11 9310708 9310712 H1TF2 TRANSFAC yes 114037733
chr11 9310708 9310712 NFE TRANSFAC yes 114037734
chr11 9310708 9310712 SRF TRANSFAC yes 114037735
chr11 9310712 9310722 HOXA13 JASPAR yes 114037736
chr11 9310712 9310722 HOXB13 JASPAR yes 114037737
chr11 9310712 9310722 HOXD13 JASPAR yes 114037738
chr11 9310712 9310723 HOXA10 JASPAR yes 114037739
chr11 9310713 9310722 CDX1 JASPAR yes 114037740
chr11 9310713 9310724 CDX2 JASPAR yes 114037741
chr11 9310719 9310723 YY1 TRANSFAC yes 114037742
chr11 9310733 9310753 ESR1 JASPAR yes 114037743
chr11 9310743 9310761 TP53 JASPAR yes 114037744
chr11 9310744 9310764 TP53 JASPAR yes 114037745
chr11 9310853 9310868 MEF2C JASPAR yes 114037746
chr11 9310854 9310869 MEF2A JASPAR yes 114037747
chr11 9310855 9310867 MEF2A JASPAR yes 114037748
chr11 9310856 9310866 MEF2A JASPAR yes 114037749
chr11 9310859 9310873 ONECUT3 JASPAR yes 114037750
chr11 9310861 9310882 IRF1 JASPAR yes 114037751
chr11 9310866 9310881 FOXP1 JASPAR yes 114037752
chr11 9310866 9310887 IRF1 JASPAR yes 114037753
chr11 9310867 9310882 FOXP1 JASPAR yes 114037754
chr11 9310868 9310883 FOXP1 JASPAR yes 114037755
chr11 9310869 9310884 FOXP1 JASPAR yes 114037756
chr11 9310870 9310885 FOXP1 JASPAR yes 114037757
chr11 9310872 9310887 FOXP1 JASPAR yes 114037758
chr11 9310874 9310889 FOXP1 JASPAR yes 114037759
chr11 9310876 9310888 IRF1 JASPAR yes 114037760
SNP sites on vista9565[chr11:9310546-9310889]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 9310692 rs192340864 G A,C
PKNOX1 PKNOX2 TGIF2
1832929
chr11 9310693 rs183126319 G A
PKNOX1 PKNOX2 TGIF2
1832930
chr11 9310696 rs143592721 GTGTGTCACCACACCAA G
PKNOX1 PKNOX2 TGIF2
1832931
chr11 9310761 rs530327921 C A
TP53
1832932
chr11 9310781 rs151177036 C T no 1832933
chr11 9310812 rs11042265 G A no 1832934
chr11 9310840 rs11042266 G A no 1832935
chr11 9310867 rs11333738 AT A
FOXP1 IRF1 MEF2A MEF2C ONECUT3
1832936
chr11 9310867 rs398015306 AT A
FOXP1 IRF1 MEF2A MEF2C ONECUT3
1832937
chr11 9310867 rs560488325 AT A
FOXP1 IRF1 MEF2A MEF2C ONECUT3
1832938
Genes possibly regulated by vista9565[chr11:9310546-9310889]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 9160372 9286937 - DENND5A ENSG00000184014.3 9286937 0.72 1.0 10563 76391
chr11 9302201 9336327 - TMEM41B ENSG00000166471.6 9336327 0.76 1.0 10564 74562
chr11 9406169 9469673 + IPO7 ENSG00000205339.5 9406169 0.65 0.99 10565 4720
Expression level of Genes
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miRNAs possibly regulated by vista9565[chr11:9310546-9310889]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results