EnhancerDB
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  3. vista957[chr1:28190756-28191157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista957[chr1:28190756-28191157]
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Tissue distribution of vista957
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Transcription factor that possibly regulate vista957[chr1:28190756-28191157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28190754 28190774 PPARG JASPAR yes 27728599
chr1 28190754 28190774 PPARG JASPAR yes 118260509
chr1 28190808 28190812 NFE TRANSFAC yes 27728600
chr1 28190808 28190812 NFE TRANSFAC yes 118260510
chr1 28190825 28190836 GCM1 JASPAR yes 27728601
chr1 28190825 28190836 GCM1 JASPAR yes 118260511
chr1 28190826 28190836 GCM2 JASPAR yes 27728602
chr1 28190826 28190836 GCM2 JASPAR yes 118260512
chr1 28190826 28190842 ZNF143 JASPAR yes 27728603
chr1 28190826 28190842 ZNF143 JASPAR yes 118260513
chr1 28190839 28190853 RXRB JASPAR yes 27728604
chr1 28190839 28190853 RXRG JASPAR yes 27728605
chr1 28190839 28190853 RXRB JASPAR yes 118260514
chr1 28190839 28190853 RXRG JASPAR yes 118260515
chr1 28190839 28190854 NR2C2 JASPAR yes 27728606
chr1 28190839 28190854 NR2C2 JASPAR yes 118260516
chr1 28190864 28190869 SP1 TRANSFAC yes 27728607
chr1 28190864 28190869 SP1 TRANSFAC yes 118260517
chr1 28190902 28190917 TFAP2A JASPAR yes 27728608
chr1 28190902 28190917 TFAP2C JASPAR yes 27728609
chr1 28190902 28190917 TFAP2A JASPAR yes 118260518
chr1 28190902 28190917 TFAP2C JASPAR yes 118260519
chr1 28190905 28190917 TFAP2A JASPAR yes 27728610
chr1 28190905 28190917 TFAP2B JASPAR yes 27728611
chr1 28190905 28190917 TFAP2C JASPAR yes 27728612
chr1 28190905 28190917 TFAP2A JASPAR yes 118260520
chr1 28190905 28190917 TFAP2B JASPAR yes 118260521
chr1 28190905 28190917 TFAP2C JASPAR yes 118260522
chr1 28190912 28190916 LFA1 TRANSFAC yes 27728613
chr1 28190912 28190916 LFA1 TRANSFAC yes 118260523
chr1 28190952 28190962 MZF1 JASPAR yes 27728614
chr1 28190952 28190962 MZF1 JASPAR yes 118260524
chr1 28190955 28190960 TFAP2A TRANSFAC yes 27728615
chr1 28190955 28190960 TFAP2A TRANSFAC yes 118260525
chr1 28190955 28190961 MZF1 JASPAR yes 27728616
chr1 28190955 28190961 MZF1 JASPAR yes 118260526
chr1 28190957 28190963 MAZ TRANSFAC yes 27728617
chr1 28190957 28190963 MAZ TRANSFAC yes 118260527
chr1 28190958 28190973 HSF1 JASPAR yes 27728618
chr1 28190958 28190973 HSF1 JASPAR yes 118260528
chr1 28190972 28190983 EBF1 JASPAR yes 27728619
chr1 28190972 28190983 EBF1 JASPAR yes 118260529
chr1 28190973 28190984 EBF1 JASPAR yes 27728620
chr1 28190973 28190984 EBF1 JASPAR yes 118260530
chr1 28190979 28190994 STAT2 JASPAR yes 27728621
chr1 28190979 28190994 STAT2 JASPAR yes 118260531
chr1 28190984 28190997 NFKB2 JASPAR yes 27728622
chr1 28190984 28190997 NFKB2 JASPAR yes 118260532
chr1 28190985 28190995 NFKB1 JASPAR yes 27728623
chr1 28190985 28190995 REL JASPAR yes 27728624
chr1 28190985 28190995 NFKB1 JASPAR yes 118260533
chr1 28190985 28190995 REL JASPAR yes 118260534
chr1 28190985 28190996 NFKB1 JASPAR yes 27728625
chr1 28190985 28190996 NFKB1 JASPAR yes 118260535
chr1 28190986 28190996 NFKB1 JASPAR yes 27728626
chr1 28190986 28190996 REL JASPAR yes 27728627
chr1 28190986 28190996 NFKB1 JASPAR yes 118260536
chr1 28190986 28190996 REL JASPAR yes 118260537
chr1 28190986 28190997 NFKB1 JASPAR yes 27728628
chr1 28190986 28190997 NFKB1 JASPAR yes 118260538
chr1 28190988 28191003 TFAP2A JASPAR yes 27728629
chr1 28190988 28191003 TFAP2C JASPAR yes 27728630
chr1 28190988 28191003 TFAP2A JASPAR yes 118260539
chr1 28190988 28191003 TFAP2C JASPAR yes 118260540
chr1 28190989 28191009 TP53 JASPAR yes 27728631
chr1 28190989 28191009 TP53 JASPAR yes 118260541
chr1 28190991 28191012 ZNF263 JASPAR yes 27728632
chr1 28190991 28191012 ZNF263 JASPAR yes 118260542
chr1 28190992 28190998 MZF1 JASPAR yes 27728633
chr1 28190992 28190998 MZF1 JASPAR yes 118260543
chr1 28190999 28191013 SPIC JASPAR yes 27728634
chr1 28190999 28191013 SPIC JASPAR yes 118260544
chr1 28191000 28191008 EHF JASPAR yes 27728635
chr1 28191000 28191008 EHF JASPAR yes 118260545
chr1 28191002 28191009 SPIB JASPAR yes 27728636
chr1 28191002 28191009 SPIB JASPAR yes 118260546
chr1 28191013 28191029 ZNF143 JASPAR yes 27728637
chr1 28191013 28191029 ZNF143 JASPAR yes 118260547
chr1 28191017 28191037 RREB1 JASPAR yes 27728638
chr1 28191017 28191037 RREB1 JASPAR yes 118260548
chr1 28191021 28191036 RUNX2 JASPAR yes 27728639
chr1 28191021 28191036 RUNX2 JASPAR yes 118260549
chr1 28191052 28191070 NR3C1 JASPAR yes 27728640
chr1 28191052 28191070 NR3C1 JASPAR yes 118260550
chr1 28191084 28191088 LFA1 TRANSFAC yes 27728641
chr1 28191084 28191088 LFA1 TRANSFAC yes 118260551
chr1 28191089 28191104 MYBL2 JASPAR yes 27728642
chr1 28191089 28191104 MYBL2 JASPAR yes 118260552
chr1 28191096 28191099 MYB TRANSFAC yes 27728643
chr1 28191096 28191099 MYB TRANSFAC yes 118260553
chr1 28191119 28191134 MEF2A JASPAR yes 27728644
chr1 28191119 28191134 MEF2A JASPAR yes 118260554
chr1 28191120 28191132 MEF2A JASPAR yes 27728645
chr1 28191120 28191132 MEF2B JASPAR yes 27728646
chr1 28191120 28191132 MEF2D JASPAR yes 27728647
chr1 28191120 28191132 MEF2A JASPAR yes 118260555
chr1 28191120 28191132 MEF2B JASPAR yes 118260556
chr1 28191120 28191132 MEF2D JASPAR yes 118260557
chr1 28191121 28191131 MEF2A JASPAR yes 27728648
chr1 28191121 28191131 MEF2A JASPAR yes 118260558
chr1 28191122 28191130 FOXL1 JASPAR yes 27728649
chr1 28191122 28191130 FOXL1 JASPAR yes 118260559
chr1 28191126 28191130 TEAD2 TRANSFAC yes 27728650
chr1 28191126 28191130 TEAD2 TRANSFAC yes 118260560
chr1 28191126 28191131 TBP TRANSFAC yes 27728651
chr1 28191126 28191131 TBP TRANSFAC yes 118260561
chr1 28191126 28191132 TFIID TRANSFAC yes 27728652
chr1 28191126 28191132 TFIID TRANSFAC yes 118260562
chr1 28191131 28191141 NFATC3 JASPAR yes 27728653
chr1 28191131 28191141 NFATC3 JASPAR yes 118260563
chr1 28191144 28191152 GATA3 JASPAR yes 27728654
chr1 28191144 28191152 GATA3 JASPAR yes 118260564
chr1 28191149 28191159 GCM2 JASPAR yes 27728655
chr1 28191149 28191159 GCM2 JASPAR yes 118260565
chr1 28191155 28191159 YY1 TRANSFAC yes 27728656
chr1 28191155 28191159 YY1 TRANSFAC yes 118260566
SNP sites on vista957[chr1:28190756-28191157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28190886 rs17162849 T C no 188660
chr1 28191041 rs189727329 C T no 188661
chr1 28191043 rs75593702 T A no 188662
Genes possibly regulated by vista957[chr1:28190756-28191157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28099694 28150963 + STX12 ENSG00000117758.9 28099694 0.77 0.99 397 8938
chr1 28157289 28178187 + PPP1R8 ENSG00000117751.13 28157289 0.57 0.99 398 66533
chr1 28177085 28177255 - AL109927.1 ENSG00000268552.1 28177255 0.0 1.0 399 86499
chr1 28199055 28213196 + THEMIS2 ENSG00000130775.11 28199055 0.93 1.0 400 92102
chr1 28218035 28241257 - RPA2 ENSG00000117748.5 28241257 0.76 0.99 401 49900
chr1 28261504 28285668 + SMPDL3B ENSG00000130768.10 28261504 0.87 1.0 402 29653
chr1 28285973 28294607 + XKR8 ENSG00000158156.7 28285973 0.65 1.0 403 5184
Expression level of Genes
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miRNAs possibly regulated by vista957[chr1:28190756-28191157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results