EnhancerDB
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  3. vista962[chr1:28213825-28214033]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista962[chr1:28213825-28214033]
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Tissue distribution of vista962
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Transcription factor that possibly regulate vista962[chr1:28213825-28214033]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28213811 28213826 HNF4G JASPAR yes 27729170
chr1 28213811 28213826 HNF4G JASPAR yes 118260873
chr1 28213812 28213827 HNF4A JASPAR yes 27729171
chr1 28213812 28213827 RUNX2 JASPAR yes 27729172
chr1 28213812 28213827 HNF4A JASPAR yes 118260874
chr1 28213812 28213827 RUNX2 JASPAR yes 118260875
chr1 28213826 28213830 YY1 TRANSFAC yes 27729173
chr1 28213826 28213830 YY1 TRANSFAC yes 118260876
chr1 28213826 28213836 ETV6 JASPAR yes 27729174
chr1 28213826 28213836 ETV6 JASPAR yes 118260877
chr1 28213826 28213841 STAT1 JASPAR yes 27729175
chr1 28213826 28213841 STAT1 JASPAR yes 118260878
chr1 28213827 28213835 FEV JASPAR yes 27729176
chr1 28213827 28213835 FEV JASPAR yes 118260879
chr1 28213829 28213836 SPIB JASPAR yes 27729177
chr1 28213829 28213836 SPIB JASPAR yes 118260880
chr1 28213842 28213857 HNF4A JASPAR yes 27729178
chr1 28213842 28213857 HNF4A JASPAR yes 118260881
chr1 28213843 28213858 HNF4G JASPAR yes 27729179
chr1 28213843 28213858 HNF4G JASPAR yes 118260882
chr1 28213856 28213866 SREBF2 JASPAR yes 27729180
chr1 28213856 28213866 SREBF2 JASPAR yes 118260883
chr1 28213868 28213872 ESR1 TRANSFAC yes 27729181
chr1 28213868 28213872 ESR1 TRANSFAC yes 118260884
chr1 28213885 28213896 FLI1 JASPAR yes 27729182
chr1 28213885 28213896 FLI1 JASPAR yes 118260885
chr1 28213896 28213902 SOX10 JASPAR yes 27729183
chr1 28213896 28213902 SOX10 JASPAR yes 118260886
chr1 28213948 28213957 HIC2 JASPAR yes 27729184
chr1 28213948 28213957 HIC2 JASPAR yes 118260887
chr1 28213952 28213963 ELK4 JASPAR yes 27729185
chr1 28213952 28213963 FLI1 JASPAR yes 27729186
chr1 28213952 28213963 ELK4 JASPAR yes 118260888
chr1 28213952 28213963 FLI1 JASPAR yes 118260889
chr1 28213952 28213965 ELF3 JASPAR yes 27729187
chr1 28213952 28213965 ELF3 JASPAR yes 118260890
chr1 28213953 28213963 ETV6 JASPAR yes 27729188
chr1 28213953 28213963 GABPA JASPAR yes 27729189
chr1 28213953 28213963 ETV6 JASPAR yes 118260891
chr1 28213953 28213963 GABPA JASPAR yes 118260892
chr1 28213953 28213964 ELF5 JASPAR yes 27729190
chr1 28213953 28213964 SPDEF JASPAR yes 27729191
chr1 28213953 28213964 ELF5 JASPAR yes 118260893
chr1 28213953 28213964 SPDEF JASPAR yes 118260894
chr1 28213953 28213965 EHF JASPAR yes 27729192
chr1 28213953 28213965 ELF1 JASPAR yes 27729193
chr1 28213953 28213965 ELF4 JASPAR yes 27729194
chr1 28213953 28213965 EHF JASPAR yes 118260895
chr1 28213953 28213965 ELF1 JASPAR yes 118260896
chr1 28213953 28213965 ELF4 JASPAR yes 118260897
chr1 28213953 28213966 ELF1 JASPAR yes 27729195
chr1 28213953 28213966 ELF1 JASPAR yes 118260898
chr1 28213953 28213967 SPI1 JASPAR yes 27729196
chr1 28213953 28213967 SPI1 JASPAR yes 118260899
chr1 28213954 28213961 SPI1 JASPAR yes 27729197
chr1 28213954 28213961 SPI1 JASPAR yes 118260900
chr1 28213954 28213962 EHF JASPAR yes 27729198
chr1 28213954 28213962 FEV JASPAR yes 27729199
chr1 28213954 28213962 EHF JASPAR yes 118260901
chr1 28213954 28213962 FEV JASPAR yes 118260902
chr1 28213960 28213977 BCL6B JASPAR yes 27729200
chr1 28213960 28213977 BCL6B JASPAR yes 118260903
chr1 28213989 28213997 EHF JASPAR yes 27729201
chr1 28213989 28213997 EHF JASPAR yes 118260904
chr1 28213991 28213996 ETS2 TRANSFAC yes 27729202
chr1 28213991 28213996 ETS2 TRANSFAC yes 118260905
chr1 28213994 28214000 TCF4 TRANSFAC yes 27729203
chr1 28213994 28214000 TCF4 TRANSFAC yes 118260906
chr1 28214001 28214004 MYB TRANSFAC yes 27729204
chr1 28214001 28214004 MYB TRANSFAC yes 118260907
SNP sites on vista962[chr1:28213825-28214033]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28213845 rs114621012 G T
HNF4A HNF4G
188895
chr1 28213983 rs11247706 G C no 188896
Genes possibly regulated by vista962[chr1:28213825-28214033]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28157289 28178187 + PPP1R8 ENSG00000117751.13 28157289 0.57 0.99 398 43464
chr1 28177085 28177255 - AL109927.1 ENSG00000268552.1 28177255 0.0 1.0 399 63430
chr1 28199055 28213196 + THEMIS2 ENSG00000130775.11 28199055 0.93 1.0 400 85230
chr1 28218035 28241257 - RPA2 ENSG00000117748.5 28241257 0.76 0.99 401 72776
chr1 28261504 28285668 + SMPDL3B ENSG00000130768.10 28261504 0.87 1.0 402 52529
chr1 28285973 28294607 + XKR8 ENSG00000158156.7 28285973 0.65 1.0 403 28060
Expression level of Genes
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miRNAs possibly regulated by vista962[chr1:28213825-28214033]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results