EnhancerDB
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  3. vista9645[chr11:10955517-10955651]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9645[chr11:10955517-10955651]
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Tissue distribution of vista9645
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Transcription factor that possibly regulate vista9645[chr11:10955517-10955651]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 10955246 10955674 CTCF UCSC Txn Factor no Conserved 107958015
chr11 10955246 10955674 CTCF UCSC Txn Factor no Conserved 107958016
chr11 10955308 10955591 SMC3 UCSC Txn Factor no Conserved 107958029
chr11 10955334 10955604 RAD21 UCSC Txn Factor no Conserved 107958040
chr11 10955569 10955588 REST JASPAR yes 37348617
chr11 10955569 10955588 REST JASPAR yes 114041280
chr11 10955572 10955576 NFE TRANSFAC yes 37348618
chr11 10955572 10955576 NFE TRANSFAC yes 114041281
chr11 10955593 10955608 MYBL2 JASPAR yes 37348619
chr11 10955593 10955608 MYBL2 JASPAR yes 114041282
chr11 10955616 10955623 SPIB JASPAR yes 37348620
chr11 10955616 10955623 SPIB JASPAR yes 114041283
chr11 10955617 10955625 EHF JASPAR yes 37348621
chr11 10955617 10955625 EHF JASPAR yes 114041284
chr11 10955622 10955627 SP1 TRANSFAC yes 37348622
chr11 10955622 10955627 SP1 TRANSFAC yes 114041285
chr11 10955630 10955634 YY1 TRANSFAC yes 37348623
chr11 10955630 10955634 YY1 TRANSFAC yes 114041286
SNP sites on vista9645[chr11:10955517-10955651]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 10955559 rs80072192 C G
CTCF RAD21 SMC3
1844867
chr11 10955618 rs143757026 G C
CTCF EHF SPIB
1844868
Genes possibly regulated by vista9645[chr11:10955517-10955651]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 10833621 10880343 - ZBED5 ENSG00000236287.3 10880343 0.8 0.99 10579 24826
Expression level of Genes
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miRNAs possibly regulated by vista9645[chr11:10955517-10955651]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results